RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 PEAR1Q5VY43 1037 aaPredicted RBP14.16□□□□□ -0.14
CXCL12-201ENST00000343575 LCTLQ6UWM7 567 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 C11orf74Q86VG3 221 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 ZNF548Q8NEK5 533 aaPredicted RBP14.16□□□□□ -0.14
CXCL12-201ENST00000343575 FAM46DQ8NEK8 389 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 OR2L8Q8NGY9 312 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 SETD7Q8WTS6 366 aaKnown RBP14.16□□□□□ -0.14
CXCL12-201ENST00000343575 RTKNQ9BST9 563 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 ZSCAN32Q9NX65 697 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 GPRC5BQ9NZH0 403 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 POMPQ9Y244 141 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 KCNE2Q9Y6J6 123 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 COLEC10Q9Y6Z7 277 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 SNRNP200O75643 2136 aaKnown RBP14.15□□□□□ -0.14
CXCL12-201ENST00000343575 GIPC1O14908 333 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 SDC3O75056 442 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 CD1EP15812 388 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 PEX2P28328 305 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 MTTPP55157 894 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 C21orf59P57076 290 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 SLC25A3Q00325 362 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 KRT33BQ14525 404 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 ANGPT1Q15389 498 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 XKR6Q5GH73 641 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 PRAMEF13Q5VWM6 474 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 SATL1Q86VE3 508 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 ADCY4Q8NFM4 1077 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 OR2A1Q8NGT9 310 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 LMX1AQ8TE12 382 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 SMPDL3AQ92484 453 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 USP7Q93009 1102 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 CXorf40BQ96DE9 158 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 WDR34Q96EX3 536 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 ACAT2Q9BWD1 397 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 SPNS1Q9H2V7 528 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 AKTIPQ9H8T0 292 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 SPHK1Q9NYA1 384 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 CPNE7Q9UBL6 633 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 TAC3Q9UHF0 121 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 MYO15AQ9UKN7 3530 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 KMT2EQ8IZD2 1858 aa14.15□□□□□ -0.14
CXCL12-201ENST00000343575 ARID1BQ8NFD5 2236 aaPredicted RBP14.15□□□□□ -0.14
CXCL12-201ENST00000343575 KIR2DS5A0A0G2JLQ3 304 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 A0A0G2JNG1 304 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 FAM86C2PA6NEL3 165 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 KIR2DS3K7RE56 304 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 MANBAO00462 879 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 SLC22A2O15244 555 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 UGDHO60701 494 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 PIAS2O75928 621 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 PRR35P0CG20 571 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 GIMD1P0DJR0 217 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 SMIM18P0DKX4 95 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 JUPP14923 745 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 NDUFS1P28331 727 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 MAGEA8P43361 318 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 NEK2P51955 445 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 HNRNPKP61978 463 aaKnown RBP eCLIP14.14□□□□□ -0.15
CXCL12-201ENST00000343575 IRF8Q02556 426 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 GPR18Q14330 331 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 KIR2DS5Q14953 304 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 ELOCQ15369 112 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 LIPJQ5W064 366 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 LPCAT4Q643R3 524 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 ADNP2Q6IQ32 1131 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 DDIASQ8IXT1 998 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 PQLC1Q8N2U9 271 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 SLC25A45Q8N413 288 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 AFAP1L2Q8N4X5 818 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 OR4E2Q8NGC2 313 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 ZNF385DQ9H6B1 395 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 ERVMER34-1Q9H9K5 563 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 HEATR5BQ9P2D3 2071 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 IGKV1-8A0A0C4DH67 115 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 BTN3A3O00478 584 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 TXNDC9O14530 226 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 AQP9O43315 295 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 NOBOXO60393 691 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 CRCPO75575 148 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 HPCAP84074 193 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 BNIP3Q12983 259 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 GRAMD1BQ3KR37 738 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 IL27RAQ6UWB1 636 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 RNF165Q6ZSG1 346 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 CHSY3Q70JA7 882 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 TMPRSS11BQ86T26 416 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 C17orf82Q86X59 251 aaPredicted RBP14.14□□□□□ -0.15
CXCL12-201ENST00000343575 FAM129CQ86XR2 697 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 ADGRF3Q8IZF5 1079 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 RNF175Q8N4F7 328 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 CHCHD4Q8N4Q1 142 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 CEP70Q8NHQ1 597 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 WDR20Q8TBZ3 569 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 ZDHHC1Q8WTX9 485 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 SLC5A11Q8WWX8 675 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 PIGKQ92643 395 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 SLC29A3Q9BZD2 475 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 FSCN3Q9NQT6 498 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 POT1Q9NUX5 634 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 CUEDC1Q9NWM3 386 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms