RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 RBM4BQ9BQ04 359 aaKnown RBP17.66■□□□□ 0.42
SHISA3-201ENST00000319234 RBM4Q9BWF3 364 aaKnown RBP17.66■□□□□ 0.42
SHISA3-201ENST00000319234 ACPTQ9BZG2 426 aa17.66■□□□□ 0.42
SHISA3-201ENST00000319234 LIMD1Q9UGP4 676 aa17.66■□□□□ 0.42
SHISA3-201ENST00000319234 TRBV5-3A0A0A0MS03 114 aa17.65■□□□□ 0.42
SHISA3-201ENST00000319234 IGLON5A6NGN9 336 aa17.65■□□□□ 0.42
SHISA3-201ENST00000319234 K7EQS6 105 aa17.65■□□□□ 0.42
SHISA3-201ENST00000319234 CXCR6O00574 342 aa17.65■□□□□ 0.42
SHISA3-201ENST00000319234 POP7O75817 140 aaKnown RBP17.65■□□□□ 0.42
SHISA3-201ENST00000319234 JUPP14923 745 aa17.65■□□□□ 0.42
SHISA3-201ENST00000319234 HALP42357 657 aa17.65■□□□□ 0.42
SHISA3-201ENST00000319234 KIR2DL1P43626 348 aaPredicted RBP17.65■□□□□ 0.42
SHISA3-201ENST00000319234 TAS2R38P59533 333 aa17.65■□□□□ 0.42
SHISA3-201ENST00000319234 NAE1Q13564 534 aa17.65■□□□□ 0.42
SHISA3-201ENST00000319234 USP39Q53GS9 565 aaKnown RBP17.65■□□□□ 0.42
SHISA3-201ENST00000319234 SPANXN4Q5MJ08 99 aa17.65■□□□□ 0.42
SHISA3-201ENST00000319234 LIPJQ5W064 366 aa17.65■□□□□ 0.42
SHISA3-201ENST00000319234 PNCKQ6P2M8 343 aa17.65■□□□□ 0.42
SHISA3-201ENST00000319234 ZNF547Q8IVP9 402 aa17.65■□□□□ 0.42
SHISA3-201ENST00000319234 MSRB3Q8IXL7 192 aa17.65■□□□□ 0.42
SHISA3-201ENST00000319234 OSBPL10Q9BXB5 764 aa17.65■□□□□ 0.42
SHISA3-201ENST00000319234 SLC25A37Q9NYZ2 338 aa17.65■□□□□ 0.42
SHISA3-201ENST00000319234 MAN2B2Q9Y2E5 1009 aa17.65■□□□□ 0.42
SHISA3-201ENST00000319234 ABCB7O75027 752 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 ATE1O95260 518 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 C1orf105O95561 183 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 CST1P01037 141 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 PRPH2P23942 346 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 HNRNPFP52597 415 aaKnown RBP17.64■□□□□ 0.41
SHISA3-201ENST00000319234 GABARAPL2P60520 117 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 IRF8Q02556 426 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 AAK1Q2M2I8 961 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 ZIK1Q3SY52 487 aaPredicted RBP17.64■□□□□ 0.41
SHISA3-201ENST00000319234 C2orf27AQ580R0 203 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 LRIF1Q5T3J3 769 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 XKR5Q6UX68 686 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 HDDC3Q8N4P3 179 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 ZNF555Q8NEP9 628 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 OR2L2Q8NH16 312 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 OR56A3Q8NH54 315 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 FBXO30Q8TB52 745 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 CSGALNACT1Q8TDX6 532 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 FAM162AQ96A26 154 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 INVSQ9Y283 1065 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 A0A096LPI6 279 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 SEC14L2O76054 403 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 PCDH8O95206 1070 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 PRPS2P11908 318 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 PCNAP12004 261 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 IMPA1P29218 277 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 SHMT2P34897 504 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 TIE1P35590 1138 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 SEC13P55735 322 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 PPP2R2BQ00005 443 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 PCDH1Q08174 1060 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 TOP3AQ13472 1001 aaPredicted RBP17.64■□□□□ 0.41
SHISA3-201ENST00000319234 SKIV2LQ15477 1246 aaKnown RBP17.64■□□□□ 0.41
SHISA3-201ENST00000319234 SLC44A4Q53GD3 710 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 FRG2Q64ET8 278 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 ENPP6Q6UWR7 440 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 TMEM26Q6ZUK4 368 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 CALHM3Q86XJ0 350 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 CACUL1Q86Y37 369 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 ADHFE1Q8IWW8 467 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 FNDC8Q8TC99 324 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 THAP11Q96EK4 314 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 FRG2BQ96QU4 278 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 OR52E6Q96RD3 313 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 KCNH6Q9H252 994 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 TOR3AQ9H497 397 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 KAT8Q9H7Z6 458 aaKnown RBP17.64■□□□□ 0.41
SHISA3-201ENST00000319234 CARS2Q9HA77 564 aaKnown RBP17.64■□□□□ 0.41
SHISA3-201ENST00000319234 DCAF13Q9NV06 445 aaKnown RBP17.64■□□□□ 0.41
SHISA3-201ENST00000319234 FAM118AQ9NWS6 357 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 CLDND1Q9NY35 253 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 BLOC1S6Q9UL45 172 aa17.64■□□□□ 0.41
SHISA3-201ENST00000319234 SH3PXD2BA1X283 911 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 MGAT4DA6NG13 374 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 NPIPB8E9PQR5 432 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 PCCBP05166 539 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 BCKDHAP12694 445 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 ELK4P28324 431 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 NEK2P51955 445 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 CLDN8P56748 225 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 PLIN5Q00G26 463 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 ZNF33BQ06732 778 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 AGERQ15109 404 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 NEDD8Q15843 81 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 WSCD2Q2TBF2 565 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 ZNF776Q68DI1 518 aaPredicted RBP17.63■□□□□ 0.41
SHISA3-201ENST00000319234 CRTC3Q6UUV7 619 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 SUSD1Q6UWL2 747 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 FAM86B1Q8N7N1 296 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 OR5K1Q8NHB7 308 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 NUDT8Q8WV74 236 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 CMTM7Q96FZ5 175 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 MED8Q96G25 268 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 DCUN1D5Q9BTE7 237 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 DPEP2Q9H4A9 486 aa17.63■□□□□ 0.41
SHISA3-201ENST00000319234 IKZF5Q9H5V7 419 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms