RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 DGCR6Q14129 220 aa10.16□□□□□ -0.78
LIG1-220ENST00000601091 DGUOKQ16854 277 aa10.16□□□□□ -0.78
LIG1-220ENST00000601091 SERINC5Q86VE9 423 aa10.16□□□□□ -0.78
LIG1-220ENST00000601091 HJURPQ8NCD3 748 aaPredicted RBP10.16□□□□□ -0.78
LIG1-220ENST00000601091 Q8NFD4 153 aa10.16□□□□□ -0.78
LIG1-220ENST00000601091 CLHC1Q8NHS4 586 aa10.16□□□□□ -0.78
LIG1-220ENST00000601091 SPPL2AQ8TCT8 520 aa10.16□□□□□ -0.78
LIG1-220ENST00000601091 IGSF8Q969P0 613 aa10.16□□□□□ -0.78
LIG1-220ENST00000601091 ITCHQ96J02 903 aa10.16□□□□□ -0.78
LIG1-220ENST00000601091 REEP1Q9H902 201 aa10.16□□□□□ -0.78
LIG1-220ENST00000601091 TAS2R7Q9NYW3 318 aa10.16□□□□□ -0.78
LIG1-220ENST00000601091 PIAS3Q9Y6X2 628 aa10.16□□□□□ -0.78
LIG1-220ENST00000601091 C5orf58C9J3I9 102 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 RGS5O15539 181 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 SCAF4O95104 1147 aaKnown RBP10.15□□□□□ -0.78
LIG1-220ENST00000601091 PRAMEF1O95521 474 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 GSRP00390 522 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 CHRNA1P02708 482 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 SRCP12931 536 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 SLC15A1P46059 708 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 HNRNPFP52597 415 aaKnown RBP10.15□□□□□ -0.78
LIG1-220ENST00000601091 HIST2H2ACQ16777 129 aaPredicted RBP10.15□□□□□ -0.78
LIG1-220ENST00000601091 USP41Q3LFD5 358 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 FAM174BQ3ZCQ3 159 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 HIST2H2AA3Q6FI13 130 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 RGMBQ6NW40 437 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 C1orf94Q6P1W5 598 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 FUT10Q6P4F1 479 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 SCD5Q86SK9 330 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 EEF1AKMT1Q8WVE0 214 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 SLC13A3Q8WWT9 602 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 MYO19Q96H55 970 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 TPD52L3Q96J77 140 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 TSSK3Q96PN8 268 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 COPS8Q99627 209 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 EPB41L1Q9H4G0 881 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 HECAQ9UBI9 543 aaPredicted RBP10.15□□□□□ -0.78
LIG1-220ENST00000601091 RPS6KA6Q9UK32 745 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 GPR34Q9UPC5 381 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 PTGDR2Q9Y5Y4 395 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 ANKRD66B4E2M5 251 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 H7C1Q1 480 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 TXNL1O43396 289 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 SCELO95171 688 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 LRG1P02750 347 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 C8BP07358 591 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 SMIM18P0DKX4 95 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 BMP2P12643 396 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 CDH1P12830 882 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 FDXRP22570 491 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 CTHP32929 405 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 GRIK2Q13002 908 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 DAG1Q14118 895 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 OTUD1Q5VV17 481 aaPredicted RBP10.15□□□□□ -0.78
LIG1-220ENST00000601091 PLBD1Q6P4A8 553 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 USP45Q70EL2 814 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 DCP2Q8IU60 420 aaKnown RBP10.15□□□□□ -0.78
LIG1-220ENST00000601091 SCML4Q8N228 414 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 FAM109AQ8N4B1 249 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 GLB1L3Q8NCI6 653 aaPredicted RBP10.15□□□□□ -0.78
LIG1-220ENST00000601091 ZBTB44Q8NCP5 570 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 BIRC7Q96CA5 298 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 PLEKHA8Q96JA3 519 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 VSX1Q9NZR4 365 aaPredicted RBP10.15□□□□□ -0.78
LIG1-220ENST00000601091 SLC13A4Q9UKG4 626 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 GMPPBQ9Y5P6 360 aa10.15□□□□□ -0.78
LIG1-220ENST00000601091 FFAR2O15552 330 aa10.15□□□□□ -0.79
LIG1-220ENST00000601091 SGCEO43556 437 aa10.15□□□□□ -0.79
LIG1-220ENST00000601091 FGF4P08620 206 aa10.15□□□□□ -0.79
LIG1-220ENST00000601091 COX7A2P14406 83 aa10.15□□□□□ -0.79
LIG1-220ENST00000601091 PKLRP30613 574 aa10.15□□□□□ -0.79
LIG1-220ENST00000601091 HNF4AP41235 474 aa10.15□□□□□ -0.79
LIG1-220ENST00000601091 PGDP52209 483 aa10.15□□□□□ -0.79
LIG1-220ENST00000601091 BNIP3Q12983 259 aa10.15□□□□□ -0.79
LIG1-220ENST00000601091 ZCCHC12Q6PEW1 402 aa10.15□□□□□ -0.79
LIG1-220ENST00000601091 BLOC1S3Q6QNY0 202 aa10.15□□□□□ -0.79
LIG1-220ENST00000601091 PRR23BQ6ZRT6 265 aa10.15□□□□□ -0.79
LIG1-220ENST00000601091 BNIPLQ7Z465 357 aa10.15□□□□□ -0.79
LIG1-220ENST00000601091 GALNTL5Q7Z4T8 443 aa10.15□□□□□ -0.79
LIG1-220ENST00000601091 SERPINA9Q86WD7 417 aa10.15□□□□□ -0.79
LIG1-220ENST00000601091 ZSWIM9Q86XI8 627 aa10.15□□□□□ -0.79
LIG1-220ENST00000601091 HIPK1Q86Z02 1210 aa10.15□□□□□ -0.79
LIG1-220ENST00000601091 CYP2S1Q96SQ9 504 aa10.15□□□□□ -0.79
LIG1-220ENST00000601091 SPACA1Q9HBV2 294 aa10.15□□□□□ -0.79
LIG1-220ENST00000601091 GLRX2Q9NS18 164 aa10.15□□□□□ -0.79
LIG1-220ENST00000601091 NLE1Q9NVX2 485 aaPredicted RBP10.15□□□□□ -0.79
LIG1-220ENST00000601091 ADPRHL2Q9NX46 363 aa10.15□□□□□ -0.79
LIG1-220ENST00000601091 IFT80Q9P2H3 777 aaPredicted RBP10.15□□□□□ -0.79
LIG1-220ENST00000601091 SLC25A13Q9UJS0 675 aa10.15□□□□□ -0.79
LIG1-220ENST00000601091 MICAL3Q7RTP6 2002 aa10.14□□□□□ -0.79
LIG1-220ENST00000601091 SLC38A8A6NNN8 435 aa10.14□□□□□ -0.79
LIG1-220ENST00000601091 IL6P05231 212 aa10.14□□□□□ -0.79
LIG1-220ENST00000601091 HSD17B1P14061 328 aa10.14□□□□□ -0.79
LIG1-220ENST00000601091 MAGEA11P43364 429 aa10.14□□□□□ -0.79
LIG1-220ENST00000601091 DGKQP52824 942 aa10.14□□□□□ -0.79
LIG1-220ENST00000601091 SPCS2Q15005 226 aa10.14□□□□□ -0.79
LIG1-220ENST00000601091 ZNF284Q2VY69 593 aa10.14□□□□□ -0.79
LIG1-220ENST00000601091 C6orf136Q5SQH8 315 aa10.14□□□□□ -0.79
LIG1-220ENST00000601091 OR7E24Q6IFN5 339 aa10.14□□□□□ -0.79
LIG1-220ENST00000601091 DENND5AQ6IQ26 1287 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms