RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 PDZD3Q86UT5 571 aa17.51■□□□□ 0.39
SMPD3-211ENST00000568373 CALHM3Q86XJ0 350 aa17.51■□□□□ 0.39
SMPD3-211ENST00000568373 OR7A2PQ8NGA2 310 aa17.51■□□□□ 0.39
SMPD3-211ENST00000568373 NELL1Q92832 810 aa17.51■□□□□ 0.39
SMPD3-211ENST00000568373 RPP25Q9BUL9 199 aaKnown RBP17.51■□□□□ 0.39
SMPD3-211ENST00000568373 EFCAB11Q9BUY7 163 aa17.51■□□□□ 0.39
SMPD3-211ENST00000568373 TRMT61BQ9BVS5 477 aaKnown RBP17.51■□□□□ 0.39
SMPD3-211ENST00000568373 REXO4Q9GZR2 422 aaKnown RBP17.51■□□□□ 0.39
SMPD3-211ENST00000568373 EHD1Q9H4M9 534 aa17.51■□□□□ 0.39
SMPD3-211ENST00000568373 ASF1AQ9Y294 204 aa17.51■□□□□ 0.39
SMPD3-211ENST00000568373 FAM220BPB1ANY3 271 aa17.51■□□□□ 0.39
SMPD3-211ENST00000568373 ACOX3O15254 700 aa17.51■□□□□ 0.39
SMPD3-211ENST00000568373 TNFAIP8O95379 198 aa17.51■□□□□ 0.39
SMPD3-211ENST00000568373 MT-ND1P03886 318 aa17.51■□□□□ 0.39
SMPD3-211ENST00000568373 RAP2AP10114 183 aa17.51■□□□□ 0.39
SMPD3-211ENST00000568373 C5AR1P21730 350 aa17.51■□□□□ 0.39
SMPD3-211ENST00000568373 FAM98BQ52LJ0 330 aaKnown RBP17.51■□□□□ 0.39
SMPD3-211ENST00000568373 SPIN4Q56A73 249 aa17.51■□□□□ 0.39
SMPD3-211ENST00000568373 C10orf62Q5T681 223 aaPredicted RBP17.51■□□□□ 0.39
SMPD3-211ENST00000568373 LRRTM4Q86VH4 590 aa17.51■□□□□ 0.39
SMPD3-211ENST00000568373 CARM1Q86X55 608 aa17.51■□□□□ 0.39
SMPD3-211ENST00000568373 MICU2Q8IYU8 434 aa17.51■□□□□ 0.39
SMPD3-211ENST00000568373 C1orf52Q8N6N3 182 aaKnown RBP17.51■□□□□ 0.39
SMPD3-211ENST00000568373 OR8J2Q8NGG1 315 aa17.51■□□□□ 0.39
SMPD3-211ENST00000568373 OR52E4Q8NGH9 312 aa17.51■□□□□ 0.39
SMPD3-211ENST00000568373 STARD8Q92502 1023 aa17.51■□□□□ 0.39
SMPD3-211ENST00000568373 LGR4Q9BXB1 951 aa17.51■□□□□ 0.39
SMPD3-211ENST00000568373 CCDC177Q9NQR7 707 aaPredicted RBP17.51■□□□□ 0.39
SMPD3-211ENST00000568373 RNF103-CHMP3A0A140T963 221 aa17.5■□□□□ 0.39
SMPD3-211ENST00000568373 SCELO95171 688 aa17.5■□□□□ 0.39
SMPD3-211ENST00000568373 RASAL1O95294 804 aa17.5■□□□□ 0.39
SMPD3-211ENST00000568373 C1GALT1C1LP0DN25 315 aa17.5■□□□□ 0.39
SMPD3-211ENST00000568373 COX7A2P14406 83 aa17.5■□□□□ 0.39
SMPD3-211ENST00000568373 SOX9P48436 509 aa17.5■□□□□ 0.39
SMPD3-211ENST00000568373 TRPC1P48995 793 aa17.5■□□□□ 0.39
SMPD3-211ENST00000568373 GZMMP51124 257 aa17.5■□□□□ 0.39
SMPD3-211ENST00000568373 RPS13P62277 151 aaKnown RBP17.5■□□□□ 0.39
SMPD3-211ENST00000568373 RAE1P78406 368 aaKnown RBP17.5■□□□□ 0.39
SMPD3-211ENST00000568373 SLBPQ14493 270 aaKnown RBP eCLIP17.5■□□□□ 0.39
SMPD3-211ENST00000568373 SF1Q15637 639 aaKnown RBP17.5■□□□□ 0.39
SMPD3-211ENST00000568373 DUOXA1Q1HG43 343 aa17.5■□□□□ 0.39
SMPD3-211ENST00000568373 C2orf27AQ580R0 203 aa17.5■□□□□ 0.39
SMPD3-211ENST00000568373 PAGE2BQ5JRK9 111 aa17.5■□□□□ 0.39
SMPD3-211ENST00000568373 HDDC3Q8N4P3 179 aa17.5■□□□□ 0.39
SMPD3-211ENST00000568373 LMNTD1Q8N9Z9 388 aa17.5■□□□□ 0.39
SMPD3-211ENST00000568373 CHTF18Q8WVB6 975 aa17.5■□□□□ 0.39
SMPD3-211ENST00000568373 FAM120BQ96EK7 910 aaKnown RBP17.5■□□□□ 0.39
SMPD3-211ENST00000568373 FAM192AQ9GZU8 254 aa17.5■□□□□ 0.39
SMPD3-211ENST00000568373 ZNF696Q9H7X3 374 aa17.5■□□□□ 0.39
SMPD3-211ENST00000568373 GEMIN8Q9NWZ8 242 aaKnown RBP17.5■□□□□ 0.39
SMPD3-211ENST00000568373 SLC23A2Q9UGH3 650 aa17.5■□□□□ 0.39
SMPD3-211ENST00000568373 SERGEFQ9UGK8 458 aa17.5■□□□□ 0.39
SMPD3-211ENST00000568373 ADGRE2Q9UHX3 823 aa17.5■□□□□ 0.39
SMPD3-211ENST00000568373 CXCR6O00574 342 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 DLGAP1O14490 977 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 SMIM18P0DKX4 95 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 C7P10643 843 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 ASMTP46597 345 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 WNT3P56703 355 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 CHRNB3Q05901 458 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 AGERQ15109 404 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 PYCR3Q53H96 274 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 FOXB2Q5VYV0 432 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 CES5AQ6NT32 575 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 LAS2Q8IYD9 372 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 C10orf111Q8N326 155 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 OXR1Q8N573 874 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 SLC5A11Q8WWX8 675 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 TFAP2CQ92754 450 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 RAD51AP1Q96B01 352 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 BDH2Q9BUT1 245 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 UGT2B28Q9BY64 529 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 ANKRD60Q9BZ19 345 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 PRM3Q9NNZ6 103 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 FAM120CQ9NX05 1096 aaKnown RBP17.49■□□□□ 0.39
SMPD3-211ENST00000568373 A0A1W2PP55 124 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 PIPSLA2A3N6 862 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 FOXE1O00358 373 aaPredicted RBP17.49■□□□□ 0.39
SMPD3-211ENST00000568373 SCN2BO60939 215 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 SH3BGRLO75368 114 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 DCUN1D3Q8IWE4 304 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 OR5AR1Q8NGP9 310 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 CDC26Q8NHZ8 85 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 TRAPPC9Q96Q05 1148 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 TEX101Q9BY14 249 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 LIMD1Q9UGP4 676 aa17.49■□□□□ 0.39
SMPD3-211ENST00000568373 NUP214P35658 2090 aaPredicted RBP17.48■□□□□ 0.39
SMPD3-211ENST00000568373 DOCK9Q9BZ29 2069 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 SCAMP2O15127 329 aaKnown RBP17.48■□□□□ 0.39
SMPD3-211ENST00000568373 CLOCKO15516 846 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 PI15O43692 258 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 RETP07949 1114 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 ANXA4P09525 319 aaPredicted RBP17.48■□□□□ 0.39
SMPD3-211ENST00000568373 KELP23276 732 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 TNFRSF4P43489 277 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 KIR2DL1P43626 348 aaPredicted RBP17.48■□□□□ 0.39
SMPD3-211ENST00000568373 GALK1P51570 392 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 ABHD18Q0P651 414 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 NXPE4Q6UWF7 544 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 ISLR2Q6UXK2 745 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms