RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 PCMTD2Q9NV79 361 aa15.05■□□□□ -0
USB1-208ENST00000563207 ACTR10Q9NZ32 417 aa15.05■□□□□ -0
USB1-208ENST00000563207 TSR3Q9UJK0 312 aaKnown RBP15.05■□□□□ -0
USB1-208ENST00000563207 A0A096LPK6 155 aa15.04■□□□□ -0
USB1-208ENST00000563207 MKRN2OSH3BPM6 223 aa15.04■□□□□ -0
USB1-208ENST00000563207 SHBGP04278 402 aa15.04■□□□□ -0
USB1-208ENST00000563207 LTA4HP09960 611 aaKnown RBP15.04■□□□□ -0
USB1-208ENST00000563207 COL6A2P12110 1019 aa15.04■□□□□ -0
USB1-208ENST00000563207 BDKRB1P46663 353 aa15.04■□□□□ -0
USB1-208ENST00000563207 CCL11P51671 97 aa15.04■□□□□ -0
USB1-208ENST00000563207 PGGT1BP53609 377 aa15.04■□□□□ -0
USB1-208ENST00000563207 RPS15P62841 145 aaKnown RBP15.04■□□□□ -0
USB1-208ENST00000563207 CDKL1Q00532 357 aa15.04■□□□□ -0
USB1-208ENST00000563207 KLRB1Q12918 225 aa15.04■□□□□ -0
USB1-208ENST00000563207 FAM83EQ2M2I3 478 aa15.04■□□□□ -0
USB1-208ENST00000563207 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.04■□□□□ -0
USB1-208ENST00000563207 TCTN3Q6NUS6 607 aa15.04■□□□□ -0
USB1-208ENST00000563207 FAM198BQ6UWH4 519 aa15.04■□□□□ -0
USB1-208ENST00000563207 CMC1Q7Z7K0 106 aa15.04■□□□□ -0
USB1-208ENST00000563207 LCA5Q86VQ0 697 aa15.04■□□□□ -0
USB1-208ENST00000563207 RIBC1Q8N443 379 aaPredicted RBP15.04■□□□□ -0
USB1-208ENST00000563207 ACMSDQ8TDX5 336 aa15.04■□□□□ -0
USB1-208ENST00000563207 ADAMTS17Q8TE56 1095 aa15.04■□□□□ -0
USB1-208ENST00000563207 CLIP3Q96DZ5 547 aa15.04■□□□□ -0
USB1-208ENST00000563207 OR2A14Q96R47 310 aa15.04■□□□□ -0
USB1-208ENST00000563207 GPR87Q9BY21 358 aa15.04■□□□□ -0
USB1-208ENST00000563207 SPRTNQ9H040 489 aaPredicted RBP15.04■□□□□ -0
USB1-208ENST00000563207 CTNNAL1Q9UBT7 734 aa15.04■□□□□ -0
USB1-208ENST00000563207 PDE10AQ9Y233 779 aa15.04■□□□□ -0
USB1-208ENST00000563207 KLHL20Q9Y2M5 609 aa15.04■□□□□ -0
USB1-208ENST00000563207 TRIM49D1C9J1S8 452 aa15.03■□□□□ -0
USB1-208ENST00000563207 MASP2O00187 686 aa15.03■□□□□ -0
USB1-208ENST00000563207 CHRM5P08912 532 aaPredicted RBP15.03■□□□□ -0
USB1-208ENST00000563207 CD1DP15813 335 aa15.03■□□□□ -0
USB1-208ENST00000563207 UGT2B7P16662 529 aa15.03■□□□□ -0
USB1-208ENST00000563207 PEBP1P30086 187 aaKnown RBP15.03■□□□□ -0
USB1-208ENST00000563207 ITGA1P56199 1179 aa15.03■□□□□ -0
USB1-208ENST00000563207 IFFO1Q0D2I5 559 aa15.03■□□□□ -0
USB1-208ENST00000563207 CCSMST1Q4G0I0 132 aa15.03■□□□□ -0
USB1-208ENST00000563207 CDKL4Q5MAI5 379 aa15.03■□□□□ -0
USB1-208ENST00000563207 KLC3Q6P597 504 aa15.03■□□□□ -0
USB1-208ENST00000563207 CYB5D1Q6P9G0 228 aa15.03■□□□□ -0
USB1-208ENST00000563207 SBSNQ6UWP8 590 aa15.03■□□□□ -0
USB1-208ENST00000563207 APLFQ8IW19 511 aaPredicted RBP15.03■□□□□ -0
USB1-208ENST00000563207 SYTL1Q8IYJ3 562 aa15.03■□□□□ -0
USB1-208ENST00000563207 C2orf73Q8N5S3 287 aaPredicted RBP15.03■□□□□ -0
USB1-208ENST00000563207 MYRIPQ8NFW9 859 aa15.03■□□□□ -0
USB1-208ENST00000563207 ATL1Q8WXF7 558 aa15.03■□□□□ -0
USB1-208ENST00000563207 SMPDL3AQ92484 453 aa15.03■□□□□ -0
USB1-208ENST00000563207 DLG3Q92796 817 aa15.03■□□□□ -0
USB1-208ENST00000563207 KIAA1191Q96A73 305 aa15.03■□□□□ -0
USB1-208ENST00000563207 PKP4Q99569 1192 aa15.03■□□□□ -0
USB1-208ENST00000563207 TMEM109Q9BVC6 243 aa15.03■□□□□ -0
USB1-208ENST00000563207 ADAMTS6Q9UKP5 1117 aa15.03■□□□□ -0
USB1-208ENST00000563207 OARD1Q9Y530 152 aa15.03■□□□□ -0
USB1-208ENST00000563207 H3BMH7 237 aa15.02■□□□□ -0
USB1-208ENST00000563207 ZNF749O43361 778 aa15.02■□□□□ -0
USB1-208ENST00000563207 KLHL2O95198 593 aa15.02■□□□□ -0
USB1-208ENST00000563207 SLC16A8O95907 504 aa15.02■□□□□ -0
USB1-208ENST00000563207 SYF2O95926 243 aaKnown RBP15.02■□□□□ -0
USB1-208ENST00000563207 RECKO95980 971 aa15.02■□□□□ -0
USB1-208ENST00000563207 CCND1P24385 295 aa15.02■□□□□ -0
USB1-208ENST00000563207 GABRA4P48169 554 aa15.02■□□□□ -0
USB1-208ENST00000563207 HNMTP50135 292 aa15.02■□□□□ -0
USB1-208ENST00000563207 PNLIPRP1P54315 467 aa15.02■□□□□ -0
USB1-208ENST00000563207 CSHL1Q14406 222 aa15.02■□□□□ -0
USB1-208ENST00000563207 ACAP2Q15057 778 aa15.02■□□□□ -0
USB1-208ENST00000563207 PPP1R3AQ16821 1122 aa15.02■□□□□ -0
USB1-208ENST00000563207 SLC5A12Q1EHB4 618 aa15.02■□□□□ -0
USB1-208ENST00000563207 TSNAXIP1Q2TAA8 658 aa15.02■□□□□ -0
USB1-208ENST00000563207 NADK2Q4G0N4 442 aa15.02■□□□□ -0
USB1-208ENST00000563207 C1orf189Q5VU69 101 aa15.02■□□□□ -0
USB1-208ENST00000563207 ZNF385CQ66K41 422 aaPredicted RBP15.02■□□□□ -0
USB1-208ENST00000563207 SPESP1Q6UW49 350 aa15.02■□□□□ -0
USB1-208ENST00000563207 CROCCP2Q86T23 111 aa15.02■□□□□ -0
USB1-208ENST00000563207 SYVN1Q86TM6 617 aa15.02■□□□□ -0
USB1-208ENST00000563207 SPNS2Q8IVW8 549 aa15.02■□□□□ -0
USB1-208ENST00000563207 TEX19Q8NA77 164 aa15.02■□□□□ -0
USB1-208ENST00000563207 LINC01555Q8NAE3 123 aa15.02■□□□□ -0
USB1-208ENST00000563207 RHEBL1Q8TAI7 183 aa15.02■□□□□ -0
USB1-208ENST00000563207 STAG3L4Q8TBR4 150 aa15.02■□□□□ -0
USB1-208ENST00000563207 DENND1AQ8TEH3 1009 aa15.02■□□□□ -0
USB1-208ENST00000563207 MIB2Q96AX9 1013 aa15.02■□□□□ -0
USB1-208ENST00000563207 ING2Q9H160 280 aa15.02■□□□□ -0
USB1-208ENST00000563207 ACTR5Q9H9F9 607 aaPredicted RBP15.02■□□□□ -0
USB1-208ENST00000563207 ARL15Q9NXU5 204 aa15.02■□□□□ -0
USB1-208ENST00000563207 TCFL5Q9UL49 500 aa15.02■□□□□ -0
USB1-208ENST00000563207 KRT87PA6NCN2 255 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 A6NL46 340 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 ISM1B1AKI9 464 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 CDC7O00311 574 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 MAP3K7O43318 606 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 PRICKLE3O43900 615 aaPredicted RBP15.01□□□□□ -0.01
USB1-208ENST00000563207 KLK3P07288 261 aaPredicted RBP15.01□□□□□ -0.01
USB1-208ENST00000563207 ANXA5P08758 320 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 SLC9A5Q14940 896 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 NAA25Q14CX7 972 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 TSNQ15631 228 aaKnown RBP15.01□□□□□ -0.01
USB1-208ENST00000563207 PHKG1Q16816 387 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 FRA10AC1Q70Z53 315 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms