RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 PADI2Q9Y2J8 665 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 FER1L5A0AVI2 2057 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 HYKKA2RU49 373 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 FITM1A5D6W6 292 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 H7BY64 318 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 TK2O00142 265 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 DSCR3O14972 297 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 SRPX2O60687 465 aaPredicted RBP11.3□□□□□ -0.6
RAB5C-204ENST00000547517 WISP3O95389 354 aaPredicted RBP11.3□□□□□ -0.6
RAB5C-204ENST00000547517 MED26O95402 600 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 STATHP02808 62 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 RHOXF2BP0C7M4 288 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 CDH1P12830 882 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 ITGAXP20702 1163 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 CCND1P24385 295 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 GMPRP36959 345 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 CCR10P46092 362 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 FOXL2P58012 376 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 RAB10P61026 200 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 BMPR2Q13873 1038 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 ZKSCAN8Q15776 578 aaPredicted RBP11.3□□□□□ -0.6
RAB5C-204ENST00000547517 ZXDCQ2QGD7 858 aaPredicted RBP11.3□□□□□ -0.6
RAB5C-204ENST00000547517 NKAIN1Q4KMZ8 207 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 YOD1Q5VVQ6 348 aaPredicted RBP11.3□□□□□ -0.6
RAB5C-204ENST00000547517 FBXO42Q6P3S6 717 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 LCTLQ6UWM7 567 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 RAPH1Q70E73 1250 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 CMC1Q7Z7K0 106 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 C17orf64Q86WR6 236 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 EXD3Q8N9H8 876 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 LSM14AQ8ND56 463 aaKnown RBP11.3□□□□□ -0.6
RAB5C-204ENST00000547517 LRRN4CLQ8ND94 238 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 OR56A3Q8NH54 315 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 ATL1Q8WXF7 558 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 CABS1Q96KC9 395 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 C10orf90Q96M02 699 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 PRAP1Q96NZ9 151 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 RHOXF2Q9BQY4 288 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 HAUS8Q9BT25 410 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 DHRS4Q9BTZ2 278 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 DERL2Q9GZP9 239 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 POLHQ9Y253 713 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 MAN2B2Q9Y2E5 1009 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 OARD1Q9Y530 152 aa11.3□□□□□ -0.6
RAB5C-204ENST00000547517 NCF1BA6NI72 391 aaPredicted RBP11.29□□□□□ -0.6
RAB5C-204ENST00000547517 NCF1CA8MVU1 366 aaPredicted RBP11.29□□□□□ -0.6
RAB5C-204ENST00000547517 P2RX6O15547 441 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 C1QL1O75973 258 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 ANXA5P08758 320 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 CCDC166P0CW27 439 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 NCF1P14598 390 aaPredicted RBP11.29□□□□□ -0.6
RAB5C-204ENST00000547517 FOLR3P41439 243 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 CSNK1G2P78368 415 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 CSHL1Q14406 222 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 HKDC1Q2TB90 917 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 PRTGQ2VWP7 1150 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 COX15Q7KZN9 410 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 RELL1Q8IUW5 271 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.29□□□□□ -0.6
RAB5C-204ENST00000547517 APOBEC4Q8WW27 367 aaKnown RBP11.29□□□□□ -0.6
RAB5C-204ENST00000547517 ANKRD7Q92527 254 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 EXT2Q93063 718 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 TSNARE1Q96NA8 513 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 OR2A5Q96R48 311 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 OR4K3Q96R72 315 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 CYTH2Q99418 400 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 FAM117AQ9C073 453 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 TSPYL1Q9H0U9 437 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 ACSS3Q9H6R3 686 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 ENAMQ9NRM1 1142 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 SLC22A11Q9NSA0 550 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 TMEM184CQ9NVA4 438 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 NFU1Q9UMS0 254 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 RUVBL1Q9Y265 456 aaKnown RBP11.29□□□□□ -0.6
RAB5C-204ENST00000547517 PTRH2Q9Y3E5 179 aaKnown RBP11.29□□□□□ -0.6
RAB5C-204ENST00000547517 MAU2Q9Y6X3 613 aa11.29□□□□□ -0.6
RAB5C-204ENST00000547517 FEZF1A0PJY2 475 aa11.28□□□□□ -0.6
RAB5C-204ENST00000547517 CNOT3O75175 753 aaKnown RBP11.28□□□□□ -0.6
RAB5C-204ENST00000547517 RECKO95980 971 aa11.28□□□□□ -0.6
RAB5C-204ENST00000547517 SLC35E2BP0CK96 405 aa11.28□□□□□ -0.6
RAB5C-204ENST00000547517 CD1DP15813 335 aa11.28□□□□□ -0.6
RAB5C-204ENST00000547517 NPPBP16860 134 aa11.28□□□□□ -0.6
RAB5C-204ENST00000547517 HRH2P25021 359 aa11.28□□□□□ -0.6
RAB5C-204ENST00000547517 OTX2P32243 289 aa11.28□□□□□ -0.6
RAB5C-204ENST00000547517 BCL6P41182 706 aa11.28□□□□□ -0.6
RAB5C-204ENST00000547517 OR1D4P47884 311 aa11.28□□□□□ -0.6
RAB5C-204ENST00000547517 RPS15AP62244 130 aaKnown RBP11.28□□□□□ -0.6
RAB5C-204ENST00000547517 CDKL1Q00532 357 aa11.28□□□□□ -0.6
RAB5C-204ENST00000547517 CHAF1BQ13112 559 aa11.28□□□□□ -0.6
RAB5C-204ENST00000547517 KCNAB2Q13303 367 aa11.28□□□□□ -0.6
RAB5C-204ENST00000547517 OR4D1Q15615 310 aa11.28□□□□□ -0.6
RAB5C-204ENST00000547517 MUM1Q2TAK8 710 aa11.28□□□□□ -0.6
RAB5C-204ENST00000547517 FAM214AQ32MH5 1076 aa11.28□□□□□ -0.6
RAB5C-204ENST00000547517 C18orf21Q32NC0 220 aaPredicted RBP11.28□□□□□ -0.6
RAB5C-204ENST00000547517 MROH9Q5TGP6 573 aa11.28□□□□□ -0.6
RAB5C-204ENST00000547517 CPZQ66K79 652 aa11.28□□□□□ -0.6
RAB5C-204ENST00000547517 TMPRSS11BQ86T26 416 aa11.28□□□□□ -0.6
RAB5C-204ENST00000547517 TBC1D1Q86TI0 1168 aaPredicted RBP11.28□□□□□ -0.6
RAB5C-204ENST00000547517 IFT20Q8IY31 132 aa11.28□□□□□ -0.6
RAB5C-204ENST00000547517 UHMK1Q8TAS1 419 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms