RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 DSCR3O14972 297 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 SRPX2O60687 465 aaPredicted RBP12.33□□□□□ -0.44
COL5A1-206ENST00000465877 EIF2S1P05198 315 aaKnown RBP12.33□□□□□ -0.44
COL5A1-206ENST00000465877 FURINP09958 794 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 SLC35E2BP0CK96 405 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 CCDC166P0CW27 439 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 CD1DP15813 335 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 ITGAXP20702 1163 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 DCDP81605 110 aaKnown RBP12.33□□□□□ -0.44
COL5A1-206ENST00000465877 CDKL1Q00532 357 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 ERV3-1Q14264 604 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 SLC9A5Q14940 896 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 TBR1Q16650 682 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 WASHC2DQ5SRD0 308 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 RAPH1Q70E73 1250 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 C17orf64Q86WR6 236 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 PLD3Q8IV08 490 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 IFT20Q8IY31 132 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 METTL27Q8N6F8 245 aaPredicted RBP12.33□□□□□ -0.44
COL5A1-206ENST00000465877 LSM14AQ8ND56 463 aaKnown RBP12.33□□□□□ -0.44
COL5A1-206ENST00000465877 RERGQ96A58 199 aaPredicted RBP12.33□□□□□ -0.44
COL5A1-206ENST00000465877 WBP1Q96G27 269 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 C10orf90Q96M02 699 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 EGFL8Q99944 293 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 ARHGAP9Q9BRR9 750 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 HAUS8Q9BT25 410 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 DHRS4Q9BTZ2 278 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 NDOR1Q9UHB4 597 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 TCFL5Q9UL49 500 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 PADI2Q9Y2J8 665 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 H0YGG7 62 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 H7BY64 318 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 P2RX6O15547 441 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 MED26O95402 600 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 ANXA5P08758 320 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 ATXN8OSP0DMR3 200 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 CDH1P12830 882 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 HRH2P25021 359 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 GMPRP36959 345 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 ARF3P61204 181 aaPredicted RBP12.32□□□□□ -0.44
COL5A1-206ENST00000465877 ATP6V0D1P61421 351 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 RPS15AP62244 130 aaKnown RBP12.32□□□□□ -0.44
COL5A1-206ENST00000465877 RELAQ04206 551 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 LY6DQ14210 128 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 CSHL1Q14406 222 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 TGFBIQ15582 683 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 OR4D1Q15615 310 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 UGT8Q16880 541 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 HKDC1Q2TB90 917 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 DEFB109BQ30KR1 87 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 LINC00303Q3SY05 128 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 NKAIN1Q4KMZ8 207 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 FAM69BQ5VUD6 431 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 COX15Q7KZN9 410 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 GSPT2Q8IYD1 628 aaKnown RBP12.32□□□□□ -0.44
COL5A1-206ENST00000465877 SPATA6LQ8N4H0 392 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 DTWD1Q8N5C7 304 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 CSNK1A1LQ8N752 337 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 SLC39A7Q92504 469 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 PTERQ96BW5 349 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 CABS1Q96KC9 395 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 UBXN10Q96LJ8 280 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 TSNARE1Q96NA8 513 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 PRAP1Q96NZ9 151 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 OR2A5Q96R48 311 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 OR4K3Q96R72 315 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 TMEM184CQ9NVA4 438 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 IFT80Q9P2H3 777 aaPredicted RBP12.32□□□□□ -0.44
COL5A1-206ENST00000465877 GPN3Q9UHW5 284 aaPredicted RBP12.32□□□□□ -0.44
COL5A1-206ENST00000465877 POLHQ9Y253 713 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 RUVBL1Q9Y265 456 aaKnown RBP12.32□□□□□ -0.44
COL5A1-206ENST00000465877 FARSAQ9Y285 508 aaKnown RBP12.32□□□□□ -0.44
COL5A1-206ENST00000465877 MAN2B2Q9Y2E5 1009 aa12.32□□□□□ -0.44
COL5A1-206ENST00000465877 COL6A6A6NMZ7 2263 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 TNRC6AQ8NDV7 1962 aaKnown RBP12.31□□□□□ -0.44
COL5A1-206ENST00000465877 HYKKA2RU49 373 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 NCF1BA6NI72 391 aaPredicted RBP12.31□□□□□ -0.44
COL5A1-206ENST00000465877 NCF1CA8MVU1 366 aaPredicted RBP12.31□□□□□ -0.44
COL5A1-206ENST00000465877 TK2O00142 265 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 CNOT3O75175 753 aaKnown RBP12.31□□□□□ -0.44
COL5A1-206ENST00000465877 RECKO95980 971 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 INHBAP08476 426 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 FAM87AP0C7U9 286 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 NCF1P14598 390 aaPredicted RBP12.31□□□□□ -0.44
COL5A1-206ENST00000465877 NPPBP16860 134 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 ALAS2P22557 587 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 HNMTP50135 292 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 SERPINB8P50452 374 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 POLE2P56282 527 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 CSNK1G2P78368 415 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 MUM1Q2TAK8 710 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 PRTGQ2VWP7 1150 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 TEX35Q5T0J7 233 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 MROH9Q5TGP6 573 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 MLIPQ5VWP3 458 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 MRPL14Q6P1L8 145 aaKnown RBP12.31□□□□□ -0.44
COL5A1-206ENST00000465877 FBXO42Q6P3S6 717 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 VN1R4Q7Z5H5 301 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 TMPRSS11BQ86T26 416 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 TBC1D1Q86TI0 1168 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms