RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 CCDC38Q502W7 563 aa16.24■□□□□ 0.19
UBE2D4-209ENST00000454428 LRRC8BQ6P9F7 803 aa16.24■□□□□ 0.19
UBE2D4-209ENST00000454428 ZNF534Q76KX8 674 aa16.24■□□□□ 0.19
UBE2D4-209ENST00000454428 GALNTL5Q7Z4T8 443 aa16.24■□□□□ 0.19
UBE2D4-209ENST00000454428 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.24■□□□□ 0.19
UBE2D4-209ENST00000454428 CDKL3Q8IVW4 592 aaPredicted RBP16.24■□□□□ 0.19
UBE2D4-209ENST00000454428 KRT222Q8N1A0 295 aa16.24■□□□□ 0.19
UBE2D4-209ENST00000454428 CSNK1A1LQ8N752 337 aa16.24■□□□□ 0.19
UBE2D4-209ENST00000454428 ZNF354BQ96LW1 612 aa16.24■□□□□ 0.19
UBE2D4-209ENST00000454428 FOXC2Q99958 501 aa16.24■□□□□ 0.19
UBE2D4-209ENST00000454428 DPH7Q9BTV6 452 aa16.24■□□□□ 0.19
UBE2D4-209ENST00000454428 CARD6Q9BX69 1037 aa16.24■□□□□ 0.19
UBE2D4-209ENST00000454428 RAB11FIP5Q9BXF6 653 aa16.24■□□□□ 0.19
UBE2D4-209ENST00000454428 VN1R1Q9GZP7 353 aa16.24■□□□□ 0.19
UBE2D4-209ENST00000454428 SLC2A6Q9UGQ3 507 aa16.24■□□□□ 0.19
UBE2D4-209ENST00000454428 RUVBL2Q9Y230 463 aaKnown RBP16.24■□□□□ 0.19
UBE2D4-209ENST00000454428 NSD1Q96L73 2696 aaPredicted RBP16.24■□□□□ 0.19
UBE2D4-209ENST00000454428 A0A0A6YYC8 382 aaPredicted RBP16.23■□□□□ 0.19
UBE2D4-209ENST00000454428 NKX2-6A6NCS4 301 aa16.23■□□□□ 0.19
UBE2D4-209ENST00000454428 I3L1I5 382 aaPredicted RBP16.23■□□□□ 0.19
UBE2D4-209ENST00000454428 PRPF4O43172 522 aaKnown RBP eCLIP16.23■□□□□ 0.19
UBE2D4-209ENST00000454428 TOXO94900 526 aa16.23■□□□□ 0.19
UBE2D4-209ENST00000454428 METTL18O95568 372 aa16.23■□□□□ 0.19
UBE2D4-209ENST00000454428 TSPAN12O95859 305 aa16.23■□□□□ 0.19
UBE2D4-209ENST00000454428 GOT2P00505 430 aaKnown RBP16.23■□□□□ 0.19
UBE2D4-209ENST00000454428 EIF3EP60228 445 aaKnown RBP16.23■□□□□ 0.19
UBE2D4-209ENST00000454428 BTBD16Q32M84 506 aa16.23■□□□□ 0.19
UBE2D4-209ENST00000454428 CPEB2Q7Z5Q1 589 aaKnown RBP16.23■□□□□ 0.19
UBE2D4-209ENST00000454428 LUZP1Q86V48 1076 aa16.23■□□□□ 0.19
UBE2D4-209ENST00000454428 DMRTC2Q8IXT2 367 aaPredicted RBP16.23■□□□□ 0.19
UBE2D4-209ENST00000454428 RAD51AP1Q96B01 352 aa16.23■□□□□ 0.19
UBE2D4-209ENST00000454428 OR2A5Q96R48 311 aa16.23■□□□□ 0.19
UBE2D4-209ENST00000454428 UTP23Q9BRU9 249 aaKnown RBP16.23■□□□□ 0.19
UBE2D4-209ENST00000454428 UCK2Q9BZX2 261 aa16.23■□□□□ 0.19
UBE2D4-209ENST00000454428 R3HDM2Q9Y2K5 976 aaKnown RBP16.23■□□□□ 0.19
UBE2D4-209ENST00000454428 OR2W5A6NFC9 320 aa16.22■□□□□ 0.19
UBE2D4-209ENST00000454428 PRRG2O14669 202 aa16.22■□□□□ 0.19
UBE2D4-209ENST00000454428 P2RX6O15547 441 aa16.22■□□□□ 0.19
UBE2D4-209ENST00000454428 SP1P08047 785 aa16.22■□□□□ 0.19
UBE2D4-209ENST00000454428 MSX1P28360 303 aa16.22■□□□□ 0.19
UBE2D4-209ENST00000454428 PTGER1P34995 402 aa16.22■□□□□ 0.19
UBE2D4-209ENST00000454428 MEP1AQ16819 746 aa16.22■□□□□ 0.19
UBE2D4-209ENST00000454428 DARS2Q6PI48 645 aaKnown RBP16.22■□□□□ 0.19
UBE2D4-209ENST00000454428 TMEM200AQ86VY9 491 aa16.22■□□□□ 0.19
UBE2D4-209ENST00000454428 OR8K1Q8NGG5 319 aa16.22■□□□□ 0.19
UBE2D4-209ENST00000454428 HDAC10Q969S8 669 aa16.22■□□□□ 0.19
UBE2D4-209ENST00000454428 PPP1R2P1Q96PQ5 205 aa16.22■□□□□ 0.19
UBE2D4-209ENST00000454428 CYTH2Q99418 400 aa16.22■□□□□ 0.19
UBE2D4-209ENST00000454428 PLCD4Q9BRC7 762 aa16.22■□□□□ 0.19
UBE2D4-209ENST00000454428 ACAT2Q9BWD1 397 aa16.22■□□□□ 0.19
UBE2D4-209ENST00000454428 COQ3Q9NZJ6 369 aa16.22■□□□□ 0.19
UBE2D4-209ENST00000454428 TTC7AQ9ULT0 858 aaPredicted RBP16.22■□□□□ 0.19
UBE2D4-209ENST00000454428 RPH3AQ9Y2J0 694 aaPredicted RBP16.22■□□□□ 0.19
UBE2D4-209ENST00000454428 PJA2O43164 708 aa16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 STK10O94804 968 aaKnown RBP16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 APOA4P06727 396 aa16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 ANXA5P08758 320 aa16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 CD46P15529 392 aa16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 HADHBP55084 474 aaKnown RBP16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 FOXD4Q12950 439 aaPredicted RBP16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 ZNF468Q5VIY5 522 aaPredicted RBP16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 GARNL3Q5VVW2 1013 aa16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 CEP128Q6ZU80 1094 aa16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 PAQR7Q86WK9 346 aa16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 ZNF227Q86WZ6 799 aa16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 TMEM178AQ8NBL3 297 aa16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 LILRB4Q8NHJ6 448 aa16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 ZNF778Q96MU6 729 aa16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 DRC3Q9H069 523 aa16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 LRRC40Q9H9A6 602 aa16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 NHEJ1Q9H9Q4 299 aaPredicted RBP16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 KCNK13Q9HB14 408 aa16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 CCM2LQ9NUG4 571 aaPredicted RBP16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 IFNKQ9P0W0 207 aa16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 RNF6Q9Y252 685 aa16.21■□□□□ 0.19
UBE2D4-209ENST00000454428 MACROD2A1Z1Q3 448 aa16.2■□□□□ 0.18
UBE2D4-209ENST00000454428 GABRR3A8MPY1 467 aa16.2■□□□□ 0.18
UBE2D4-209ENST00000454428 FOXO6A8MYZ6 492 aa16.2■□□□□ 0.18
UBE2D4-209ENST00000454428 ERGP11308 486 aa16.2■□□□□ 0.18
UBE2D4-209ENST00000454428 DRD2P14416 443 aa16.2■□□□□ 0.18
UBE2D4-209ENST00000454428 PARP6Q2NL67 630 aa16.2■□□□□ 0.18
UBE2D4-209ENST00000454428 ZNF425Q6IV72 752 aa16.2■□□□□ 0.18
UBE2D4-209ENST00000454428 SLC25A25Q6KCM7 469 aa16.2■□□□□ 0.18
UBE2D4-209ENST00000454428 ANKRD37Q7Z713 158 aa16.2■□□□□ 0.18
UBE2D4-209ENST00000454428 LDB1Q86U70 411 aaPredicted RBP16.2■□□□□ 0.18
UBE2D4-209ENST00000454428 RPRMLQ8N4K4 120 aa16.2■□□□□ 0.18
UBE2D4-209ENST00000454428 CPSF7Q8N684 471 aaKnown RBP16.2■□□□□ 0.18
UBE2D4-209ENST00000454428 ALS2CR12Q96Q35 445 aa16.2■□□□□ 0.18
UBE2D4-209ENST00000454428 FERMT1Q9BQL6 677 aa16.2■□□□□ 0.18
UBE2D4-209ENST00000454428 ZNF559Q9BR84 538 aa16.2■□□□□ 0.18
UBE2D4-209ENST00000454428 KCNN3Q9UGI6 736 aa16.2■□□□□ 0.18
UBE2D4-209ENST00000454428 INTUQ9ULD6 942 aa16.2■□□□□ 0.18
UBE2D4-209ENST00000454428 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.2■□□□□ 0.18
UBE2D4-209ENST00000454428 TMEM200CA6NKL6 621 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 FAM90A27PA6NNH2 459 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 MBD3O95983 291 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 HOXD4P09016 255 aaPredicted RBP16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 ZNF24P17028 368 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 CMPK1P30085 196 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 ACVR1Q04771 509 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms