RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 PLCD4Q9BRC7 762 aa20.74■□□□□ 0.91
DDX39A-215ENST00000590696 IGLV3-12A0A075B6K2 115 aa20.73■□□□□ 0.91
DDX39A-215ENST00000590696 PSIP1O75475 530 aaKnown RBP20.73■□□□□ 0.91
DDX39A-215ENST00000590696 RPA3P35244 121 aaPredicted RBP20.73■□□□□ 0.91
DDX39A-215ENST00000590696 MFAP5Q13361 173 aa20.73■□□□□ 0.91
DDX39A-215ENST00000590696 TSTA3Q13630 321 aaPredicted RBP20.73■□□□□ 0.91
DDX39A-215ENST00000590696 KLHL38Q2WGJ6 581 aa20.73■□□□□ 0.91
DDX39A-215ENST00000590696 CATSPER1Q8NEC5 780 aa20.73■□□□□ 0.91
DDX39A-215ENST00000590696 FAR1Q8WVX9 515 aa20.73■□□□□ 0.91
DDX39A-215ENST00000590696 LMF1Q96S06 567 aa20.73■□□□□ 0.91
DDX39A-215ENST00000590696 YIPF2Q9BWQ6 316 aa20.73■□□□□ 0.91
DDX39A-215ENST00000590696 CDC14AQ9UNH5 594 aa20.73■□□□□ 0.91
DDX39A-215ENST00000590696 DOPEY1Q5JWR5 2465 aa20.72■□□□□ 0.91
DDX39A-215ENST00000590696 GOLGA6L6A8MZA4 724 aa20.72■□□□□ 0.91
DDX39A-215ENST00000590696 E5RI56 91 aa20.72■□□□□ 0.91
DDX39A-215ENST00000590696 MYO1CO00159 1063 aa20.72■□□□□ 0.91
DDX39A-215ENST00000590696 E2F3O00716 465 aa20.72■□□□□ 0.91
DDX39A-215ENST00000590696 AVILO75366 819 aa20.72■□□□□ 0.91
DDX39A-215ENST00000590696 VPS26AO75436 327 aa20.72■□□□□ 0.91
DDX39A-215ENST00000590696 PKMP14618 531 aaKnown RBP20.72■□□□□ 0.91
DDX39A-215ENST00000590696 OGNP20774 298 aaKnown RBP20.72■□□□□ 0.91
DDX39A-215ENST00000590696 EMP3P54852 163 aa20.72■□□□□ 0.91
DDX39A-215ENST00000590696 TRIP13Q15645 432 aaPredicted RBP20.72■□□□□ 0.91
DDX39A-215ENST00000590696 KIAA0930Q6ICG6 404 aaPredicted RBP20.72■□□□□ 0.91
DDX39A-215ENST00000590696 CENPUQ71F23 418 aa20.72■□□□□ 0.91
DDX39A-215ENST00000590696 PAQR7Q86WK9 346 aa20.72■□□□□ 0.91
DDX39A-215ENST00000590696 KBTBD2Q8IY47 623 aa20.72■□□□□ 0.91
DDX39A-215ENST00000590696 PKP4Q99569 1192 aa20.72■□□□□ 0.91
DDX39A-215ENST00000590696 SYNPO2LQ9H987 977 aa20.72■□□□□ 0.91
DDX39A-215ENST00000590696 LZTFL1Q9NQ48 299 aa20.72■□□□□ 0.91
DDX39A-215ENST00000590696 OSGIN2Q9Y236 505 aa20.72■□□□□ 0.91
DDX39A-215ENST00000590696 RUVBL1Q9Y265 456 aaKnown RBP20.72■□□□□ 0.91
DDX39A-215ENST00000590696 NSG1A0A0A6YYJ2 146 aa20.71■□□□□ 0.91
DDX39A-215ENST00000590696 IGKV1-8A0A0C4DH67 115 aa20.71■□□□□ 0.91
DDX39A-215ENST00000590696 FFAR3O14843 346 aa20.71■□□□□ 0.91
DDX39A-215ENST00000590696 GPR42O15529 346 aa20.71■□□□□ 0.91
DDX39A-215ENST00000590696 PHF2O75151 1096 aa20.71■□□□□ 0.91
DDX39A-215ENST00000590696 CATP04040 527 aaKnown RBP20.71■□□□□ 0.91
DDX39A-215ENST00000590696 EDN3P14138 238 aa20.71■□□□□ 0.91
DDX39A-215ENST00000590696 EMP2P54851 167 aa20.71■□□□□ 0.91
DDX39A-215ENST00000590696 ARHGAP19Q14CB8 494 aa20.71■□□□□ 0.91
DDX39A-215ENST00000590696 HKDC1Q2TB90 917 aa20.71■□□□□ 0.91
DDX39A-215ENST00000590696 NDUFAF7Q7L592 441 aa20.71■□□□□ 0.91
DDX39A-215ENST00000590696 CILP2Q8IUL8 1156 aa20.71■□□□□ 0.91
DDX39A-215ENST00000590696 CSNK1A1LQ8N752 337 aa20.71■□□□□ 0.91
DDX39A-215ENST00000590696 FAM114A2Q9NRY5 505 aa20.71■□□□□ 0.91
DDX39A-215ENST00000590696 TRPC4Q9UBN4 977 aa20.71■□□□□ 0.91
DDX39A-215ENST00000590696 TAC3Q9UHF0 121 aa20.71■□□□□ 0.91
DDX39A-215ENST00000590696 NOTCH2Q04721 2471 aa20.71■□□□□ 0.91
DDX39A-215ENST00000590696 IDSB3KWA1 339 aa20.7■□□□□ 0.9
DDX39A-215ENST00000590696 PRPF4O43172 522 aaKnown RBP eCLIP20.7■□□□□ 0.93e-6■■■□□ 15.7
DDX39A-215ENST00000590696 LRRTM2O43300 516 aa20.7■□□□□ 0.9
DDX39A-215ENST00000590696 CEP104O60308 925 aa20.7■□□□□ 0.9
DDX39A-215ENST00000590696 USP1O94782 785 aa20.7■□□□□ 0.9
DDX39A-215ENST00000590696 COX6A1P12074 109 aa20.7■□□□□ 0.9
DDX39A-215ENST00000590696 PAMP19021 973 aa20.7■□□□□ 0.9
DDX39A-215ENST00000590696 CXCR2P25025 360 aa20.7■□□□□ 0.9
DDX39A-215ENST00000590696 PNLIPRP1P54315 467 aa20.7■□□□□ 0.9
DDX39A-215ENST00000590696 SARNPP82979 210 aaKnown RBP20.7■□□□□ 0.9
DDX39A-215ENST00000590696 PRDX1Q06830 199 aaKnown RBP20.7■□□□□ 0.9
DDX39A-215ENST00000590696 DSG2Q14126 1118 aa20.7■□□□□ 0.9
DDX39A-215ENST00000590696 KCNJ11Q14654 390 aa20.7■□□□□ 0.9
DDX39A-215ENST00000590696 ICE2Q659A1 982 aa20.7■□□□□ 0.9
DDX39A-215ENST00000590696 NEPROQ6NW34 567 aa20.7■□□□□ 0.9
DDX39A-215ENST00000590696 CASC4Q6P4E1 433 aa20.7■□□□□ 0.9
DDX39A-215ENST00000590696 FAM180AQ6UWF9 173 aa20.7■□□□□ 0.9
DDX39A-215ENST00000590696 REXO1L1PQ8IX06 675 aa20.7■□□□□ 0.9
DDX39A-215ENST00000590696 PPFIBP2Q8ND30 876 aa20.7■□□□□ 0.9
DDX39A-215ENST00000590696 OR1N1Q8NGS0 311 aa20.7■□□□□ 0.9
DDX39A-215ENST00000590696 MVB12AQ96EY5 273 aa20.7■□□□□ 0.9
DDX39A-215ENST00000590696 MMABQ96EY8 250 aaPredicted RBP20.7■□□□□ 0.9
DDX39A-215ENST00000590696 SLC30A3Q99726 388 aa20.7■□□□□ 0.9
DDX39A-215ENST00000590696 TRIM56Q9BRZ2 755 aaKnown RBP20.7■□□□□ 0.9
DDX39A-215ENST00000590696 HOMER3Q9NSC5 361 aa20.7■□□□□ 0.9
DDX39A-215ENST00000590696 PTGFRNQ9P2B2 879 aa20.7■□□□□ 0.9
DDX39A-215ENST00000590696 ZNF839A8K0R7 811 aa20.69■□□□□ 0.9
DDX39A-215ENST00000590696 HEXBP07686 556 aa20.69■□□□□ 0.9
DDX39A-215ENST00000590696 PRR35P0CG20 571 aa20.69■□□□□ 0.9
DDX39A-215ENST00000590696 CXCR5P32302 372 aa20.69■□□□□ 0.9
DDX39A-215ENST00000590696 HSD17B2P37059 387 aa20.69■□□□□ 0.9
DDX39A-215ENST00000590696 SLC26A3P40879 764 aa20.69■□□□□ 0.9
DDX39A-215ENST00000590696 VPS41P49754 854 aa20.69■□□□□ 0.9
DDX39A-215ENST00000590696 CLCN7P51798 805 aa20.69■□□□□ 0.9
DDX39A-215ENST00000590696 ARG2P78540 354 aa20.69■□□□□ 0.9
DDX39A-215ENST00000590696 EEF1A2Q05639 463 aaKnown RBP20.69■□□□□ 0.9
DDX39A-215ENST00000590696 FAAH2Q6GMR7 532 aa20.69■□□□□ 0.9
DDX39A-215ENST00000590696 ZNF425Q6IV72 752 aa20.69■□□□□ 0.9
DDX39A-215ENST00000590696 RPUSD3Q6P087 351 aaKnown RBP20.69■□□□□ 0.9
DDX39A-215ENST00000590696 AMER3Q8N944 861 aa20.69■□□□□ 0.9
DDX39A-215ENST00000590696 BRIX1Q8TDN6 353 aaKnown RBP20.69■□□□□ 0.9
DDX39A-215ENST00000590696 PSMF1Q92530 271 aa20.69■□□□□ 0.9
DDX39A-215ENST00000590696 OR2A5Q96R48 311 aa20.69■□□□□ 0.9
DDX39A-215ENST00000590696 ABCF3Q9NUQ8 709 aa20.69■□□□□ 0.9
DDX39A-215ENST00000590696 C14orf105Q9NVL8 296 aa20.69■□□□□ 0.9
DDX39A-215ENST00000590696 INTS10Q9NVR2 710 aaKnown RBP20.69■□□□□ 0.9
DDX39A-215ENST00000590696 UTP6Q9NYH9 597 aaKnown RBP20.69■□□□□ 0.9
DDX39A-215ENST00000590696 VPS9D1Q9Y2B5 631 aa20.69■□□□□ 0.9
DDX39A-215ENST00000590696 IGHV1-45A0A0A0MS14 117 aa20.68■□□□□ 0.9
DDX39A-215ENST00000590696 CCNDBP1O95273 360 aa20.68■□□□□ 0.9
DDX39A-215ENST00000590696 SLC16A8O95907 504 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms