RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 SPOCK3Q9BQ16 436 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 SELENOSQ9BQE4 189 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 RNF32Q9H0A6 362 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 MCCC2Q9HCC0 563 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.5■□□□□ 0.23
RETREG3-210ENST00000590541 ZNF282Q9UDV7 671 aaPredicted RBP16.5■□□□□ 0.23
RETREG3-210ENST00000590541 IGLV3-12A0A075B6K2 115 aa16.49■□□□□ 0.23
RETREG3-210ENST00000590541 IGHV1-45A0A0A0MS14 117 aa16.49■□□□□ 0.23
RETREG3-210ENST00000590541 CTSVO60911 334 aa16.49■□□□□ 0.23
RETREG3-210ENST00000590541 FGGP02679 453 aa16.49■□□□□ 0.23
RETREG3-210ENST00000590541 OR56A5P0C7T3 313 aa16.49■□□□□ 0.23
RETREG3-210ENST00000590541 CD9P21926 228 aa16.49■□□□□ 0.23
RETREG3-210ENST00000590541 FOXN2P32314 431 aa16.49■□□□□ 0.23
RETREG3-210ENST00000590541 VSX2P58304 361 aaPredicted RBP16.49■□□□□ 0.23
RETREG3-210ENST00000590541 CCZ1BP86790 482 aa16.49■□□□□ 0.23
RETREG3-210ENST00000590541 CCZ1P86791 482 aaPredicted RBP16.49■□□□□ 0.23
RETREG3-210ENST00000590541 CDK16Q00536 496 aa16.49■□□□□ 0.23
RETREG3-210ENST00000590541 GRB7Q14451 532 aa16.49■□□□□ 0.23
RETREG3-210ENST00000590541 SIX1Q15475 284 aaPredicted RBP16.49■□□□□ 0.23
RETREG3-210ENST00000590541 WASHC2DQ5SRD0 308 aa16.49■□□□□ 0.23
RETREG3-210ENST00000590541 CNSTQ6PJW8 725 aa16.49■□□□□ 0.23
RETREG3-210ENST00000590541 TAB3Q8N5C8 712 aaPredicted RBP16.49■□□□□ 0.23
RETREG3-210ENST00000590541 SLC22A18Q96BI1 424 aa16.49■□□□□ 0.23
RETREG3-210ENST00000590541 IL17FQ96PD4 163 aa16.49■□□□□ 0.23
RETREG3-210ENST00000590541 INTS7Q9NVH2 962 aaKnown RBP16.49■□□□□ 0.23
RETREG3-210ENST00000590541 PIH1D1Q9NWS0 290 aaKnown RBP16.49■□□□□ 0.23
RETREG3-210ENST00000590541 CIDEBQ9UHD4 219 aa16.49■□□□□ 0.23
RETREG3-210ENST00000590541 ZNF835Q9Y2P0 537 aa16.49■□□□□ 0.23
RETREG3-210ENST00000590541 HYKKA2RU49 373 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 OR5H15A6NDH6 313 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 PRAMEF2O60811 474 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 WFS1O76024 890 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 S1PR4O95977 384 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 ITGAMP11215 1152 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 PRAMEP78395 509 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 EEF1A2Q05639 463 aaKnown RBP16.48■□□□□ 0.23
RETREG3-210ENST00000590541 SYTL3Q4VX76 610 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 CCDC38Q502W7 563 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 AARS2Q5JTZ9 985 aaKnown RBP16.48■□□□□ 0.23
RETREG3-210ENST00000590541 ARMC3Q5W041 872 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 FAAH2Q6GMR7 532 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 FRMPD2BQ6IN97 320 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 RIPOR1Q6ZS17 1223 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 NCCRP1Q6ZVX7 275 aaPredicted RBP16.48■□□□□ 0.23
RETREG3-210ENST00000590541 GSTA5Q7RTV2 222 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 PPHLN1Q8NEY8 458 aaKnown RBP16.48■□□□□ 0.23
RETREG3-210ENST00000590541 OR13J1Q8NGT2 312 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 OR4L1Q8NH43 312 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 CHTF18Q8WVB6 975 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 HDAC10Q969S8 669 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 TSSK1BQ9BXA7 367 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 ENKD1Q9H0I2 346 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 STOX2Q9P2F5 926 aaPredicted RBP16.48■□□□□ 0.23
RETREG3-210ENST00000590541 PPP2R2CQ9Y2T4 447 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 NEU2Q9Y3R4 380 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 TCAF1Q9Y4C2 921 aa16.48■□□□□ 0.23
RETREG3-210ENST00000590541 CCDC162PA2VCL2 907 aa16.47■□□□□ 0.23
RETREG3-210ENST00000590541 IDSB3KWA1 339 aa16.47■□□□□ 0.23
RETREG3-210ENST00000590541 SRPX2O60687 465 aaPredicted RBP16.47■□□□□ 0.23
RETREG3-210ENST00000590541 ETS1P14921 441 aa16.47■□□□□ 0.23
RETREG3-210ENST00000590541 RPL22P35268 128 aaKnown RBP16.47■□□□□ 0.23
RETREG3-210ENST00000590541 NPY2RP49146 381 aa16.47■□□□□ 0.23
RETREG3-210ENST00000590541 EMP2P54851 167 aa16.47■□□□□ 0.23
RETREG3-210ENST00000590541 SF1Q15637 639 aaKnown RBP16.47■□□□□ 0.23
RETREG3-210ENST00000590541 PCID2Q5JVF3 399 aa16.47■□□□□ 0.23
RETREG3-210ENST00000590541 PRMT9Q6P2P2 845 aa16.47■□□□□ 0.23
RETREG3-210ENST00000590541 Q6ZPB1 254 aaPredicted RBP16.47■□□□□ 0.23
RETREG3-210ENST00000590541 OR2L8Q8NGY9 312 aa16.47■□□□□ 0.23
RETREG3-210ENST00000590541 SUN3Q8TAQ9 357 aa16.47■□□□□ 0.23
RETREG3-210ENST00000590541 IL22Q9GZX6 179 aa16.47■□□□□ 0.23
RETREG3-210ENST00000590541 BFARQ9NZS9 450 aa16.47■□□□□ 0.23
RETREG3-210ENST00000590541 ZC3H7BQ9UGR2 993 aaKnown RBP16.47■□□□□ 0.23
RETREG3-210ENST00000590541 ANAPC5Q9UJX4 755 aa16.47■□□□□ 0.23
RETREG3-210ENST00000590541 MEMO1Q9Y316 297 aa16.47■□□□□ 0.23
RETREG3-210ENST00000590541 CACNA1CQ13936 2221 aa16.47■□□□□ 0.23
RETREG3-210ENST00000590541 LOC105369274A0A096LPK9 316 aa16.46■□□□□ 0.23
RETREG3-210ENST00000590541 LOC102723532A0A0G2JNH3 316 aa16.46■□□□□ 0.23
RETREG3-210ENST00000590541 TARM1B6A8C7 271 aa16.46■□□□□ 0.23
RETREG3-210ENST00000590541 CEP104O60308 925 aa16.46■□□□□ 0.23
RETREG3-210ENST00000590541 NRP2O60462 931 aa16.46■□□□□ 0.23
RETREG3-210ENST00000590541 GOT2P00505 430 aaKnown RBP16.46■□□□□ 0.23
RETREG3-210ENST00000590541 UQCRHP07919 91 aa16.46■□□□□ 0.23
RETREG3-210ENST00000590541 HOXB4P17483 251 aaPredicted RBP16.46■□□□□ 0.23
RETREG3-210ENST00000590541 CXCR2P25025 360 aa16.46■□□□□ 0.23
RETREG3-210ENST00000590541 GRIA1P42261 906 aa16.46■□□□□ 0.23
RETREG3-210ENST00000590541 CSE1LP55060 971 aaKnown RBP16.46■□□□□ 0.23
RETREG3-210ENST00000590541 CSNK1G2P78368 415 aa16.46■□□□□ 0.23
RETREG3-210ENST00000590541 FASTKD1Q53R41 847 aaKnown RBP16.46■□□□□ 0.23
RETREG3-210ENST00000590541 DNAJC21Q5F1R6 531 aaKnown RBP16.46■□□□□ 0.23
RETREG3-210ENST00000590541 SPPL2CQ8IUH8 684 aa16.46■□□□□ 0.23
RETREG3-210ENST00000590541 VRK3Q8IV63 474 aa16.46■□□□□ 0.23
RETREG3-210ENST00000590541 SLC22A15Q8IZD6 547 aa16.46■□□□□ 0.23
RETREG3-210ENST00000590541 OR4N4Q8N0Y3 316 aa16.46■□□□□ 0.23
RETREG3-210ENST00000590541 OR6P1Q8NGX9 317 aa16.46■□□□□ 0.23
RETREG3-210ENST00000590541 THAP3Q8WTV1 239 aaPredicted RBP16.46■□□□□ 0.23
RETREG3-210ENST00000590541 ZUFSPQ96AP4 578 aa16.46■□□□□ 0.23
RETREG3-210ENST00000590541 C10orf90Q96M02 699 aa16.46■□□□□ 0.23
RETREG3-210ENST00000590541 TREX2Q9BQ50 279 aaPredicted RBP16.46■□□□□ 0.23
RETREG3-210ENST00000590541 RIC8BQ9NVN3 520 aa16.46■□□□□ 0.23
RETREG3-210ENST00000590541 JRKLQ9Y4A0 524 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms