RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 PRSS23O95084 383 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 ETHE1O95571 254 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 CTSAP10619 480 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 PFKLP17858 780 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 IDUAP35475 653 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 FAM98BQ52LJ0 330 aaKnown RBP14.33□□□□□ -0.12
DDX55-209ENST00000542286 RUNDC3AQ59EK9 446 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 MFSD4BQ5TF39 518 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 DOK6Q6PKX4 331 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 GALNT5Q7Z7M9 940 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 CACUL1Q86Y37 369 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 BPIFB6Q8NFQ5 453 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 OSCP1Q8WVF1 389 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 LRRC3BQ96PB8 259 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 MCCC1Q96RQ3 725 aaPredicted RBP14.33□□□□□ -0.12
DDX55-209ENST00000542286 TUBA1CQ9BQE3 449 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 KLHL25Q9H0H3 589 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 FBXO10Q9UK96 956 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 MAN1A2O60476 641 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 ZNF682O95780 498 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 KRT6AP02538 564 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 ALBP02768 609 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 KRT6BP04259 564 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 HIST1H2AGP0C0S8 130 aaPredicted RBP14.33□□□□□ -0.12
DDX55-209ENST00000542286 LINC00271P0C7V0 271 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 RAP2AP10114 183 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 HIST1H2ADP20671 130 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 RCVRNP35243 200 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 OPRL1P41146 370 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 GSSP48637 474 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 KRT6CP48668 564 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 PCYT1AP49585 367 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 FXNQ16595 210 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 CES5AQ6NT32 575 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 FAM180BQ6P0A1 224 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 CBARPQ8N350 705 aaPredicted RBP14.33□□□□□ -0.12
DDX55-209ENST00000542286 GPR156Q8NFN8 814 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 ZFYVE19Q96K21 471 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 HIST1H2AHQ96KK5 128 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 CNDP2Q96KP4 475 aaKnown RBP14.33□□□□□ -0.12
DDX55-209ENST00000542286 LYSMD1Q96S90 227 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 HIST1H2AJQ99878 128 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 H2AFJQ9BTM1 129 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 KAT8Q9H7Z6 458 aaKnown RBP14.33□□□□□ -0.12
DDX55-209ENST00000542286 FANCEQ9HB96 536 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 PSME2Q9UL46 239 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 KCNE1BA0A087WTH5 132 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 GRM6O15303 877 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 CPSF4O95639 269 aaKnown RBP14.32□□□□□ -0.12
DDX55-209ENST00000542286 POP4O95707 220 aaKnown RBP14.32□□□□□ -0.12
DDX55-209ENST00000542286 ALPLP05186 524 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 FCGR1AP12314 374 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 CYP4B1P13584 511 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 AGXTP21549 392 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 S100A3P33764 101 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 IRS1P35568 1242 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 MAPK8P45983 427 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 CSNK1DP48730 415 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 PFN3P60673 137 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 ADARB1P78563 741 aaKnown RBP14.32□□□□□ -0.12
DDX55-209ENST00000542286 MEP1AQ16819 746 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 C2orf73Q8N5S3 287 aaPredicted RBP14.32□□□□□ -0.12
DDX55-209ENST00000542286 IRF7Q92985 503 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 ZNF347Q96SE7 839 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 SLC12A9Q9BXP2 914 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 AMBRA1Q9C0C7 1298 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 FAM83DQ9H4H8 585 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 CD320Q9NPF0 282 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 IFT80Q9P2H3 777 aaPredicted RBP14.32□□□□□ -0.12
DDX55-209ENST00000542286 ATG2BQ96BY7 2078 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 ARHGEF33A8MVX0 844 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 GMNNO75496 209 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 HLA-EP13747 358 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 VAC14Q08AM6 782 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 NAE1Q13564 534 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 RBM23Q86U06 439 aaKnown RBP14.32□□□□□ -0.12
DDX55-209ENST00000542286 OR8J3Q8NGG0 315 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 UBTD2Q8WUN7 234 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 FAM120BQ96EK7 910 aaKnown RBP14.32□□□□□ -0.12
DDX55-209ENST00000542286 PKD2L2Q9NZM6 624 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 KIAA1671Q9BY89 1806 aa14.32□□□□□ -0.12
DDX55-209ENST00000542286 ABHD14A-ACY1A0A1B0GW23 586 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 G3V2T6 193 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 K7ESM1 405 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 SAP18O00422 153 aaKnown RBP14.31□□□□□ -0.12
DDX55-209ENST00000542286 NDUFB5O43674 189 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 CREG1O75629 220 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 NUDT7P0C024 238 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 UMPSP11172 480 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 EPCAMP16422 314 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 PTPN6P29350 595 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 AQP1P29972 269 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 HLCSP50747 726 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 DAG1Q14118 895 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 XKR6Q5GH73 641 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 MPP7Q5T2T1 576 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 IRAK1BP1Q5VVH5 260 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 NECAB2Q7Z6G3 386 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 VTCN1Q7Z7D3 282 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 C12orf40Q86WS4 652 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms