RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 CEACAM8P31997 349 aaPredicted RBP4.96□□□□□ -1.62
SSR3-208ENST00000496050 DCTP40126 519 aa4.96□□□□□ -1.62
SSR3-208ENST00000496050 HNF4AP41235 474 aa4.96□□□□□ -1.62
SSR3-208ENST00000496050 FRKP42685 505 aaPredicted RBP4.96□□□□□ -1.62
SSR3-208ENST00000496050 GLIPR1P48060 266 aa4.96□□□□□ -1.62
SSR3-208ENST00000496050 RPL36AP83881 106 aaKnown RBP4.96□□□□□ -1.62
SSR3-208ENST00000496050 PDLIM3Q53GG5 364 aaPredicted RBP4.96□□□□□ -1.62
SSR3-208ENST00000496050 FUT10Q6P4F1 479 aa4.96□□□□□ -1.62
SSR3-208ENST00000496050 CTR9Q6PD62 1173 aa4.96□□□□□ -1.62
SSR3-208ENST00000496050 ZNF771Q7L3S4 317 aaPredicted RBP4.96□□□□□ -1.62
SSR3-208ENST00000496050 ISCA2Q86U28 154 aa4.96□□□□□ -1.62
SSR3-208ENST00000496050 LMNTD1Q8N9Z9 388 aa4.96□□□□□ -1.62
SSR3-208ENST00000496050 ZNF383Q8NA42 475 aa4.96□□□□□ -1.62
SSR3-208ENST00000496050 OR10Q1Q8NGQ4 319 aa4.96□□□□□ -1.62
SSR3-208ENST00000496050 ALG14Q96F25 216 aa4.96□□□□□ -1.62
SSR3-208ENST00000496050 MAP3K3Q99759 626 aa4.96□□□□□ -1.62
SSR3-208ENST00000496050 OR2B2Q9GZK3 357 aa4.96□□□□□ -1.62
SSR3-208ENST00000496050 RIMS4Q9H426 269 aaPredicted RBP4.96□□□□□ -1.62
SSR3-208ENST00000496050 SRD5A3Q9H8P0 318 aa4.96□□□□□ -1.62
SSR3-208ENST00000496050 P4HTMQ9NXG6 502 aa4.96□□□□□ -1.62
SSR3-208ENST00000496050 GMEB2Q9UKD1 530 aa4.96□□□□□ -1.62
SSR3-208ENST00000496050 ACEP12821 1306 aa4.96□□□□□ -1.62
SSR3-208ENST00000496050 KCNAB3O43448 404 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 TSHBP01222 138 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 FRMD6-AS1P0C7T7 363 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 GP1BBP13224 206 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 ALDH4A1P30038 563 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 SFTPDP35247 375 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 FOLH1Q04609 750 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 IL10RBQ08334 325 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 TEFQ10587 303 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 PPP2R5CQ13362 524 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 HERC3Q15034 1050 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 C2orf76Q3KRA6 126 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 ZNF718Q3SXZ3 478 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 ZC2HC1CQ53FD0 456 aaPredicted RBP4.95□□□□□ -1.62
SSR3-208ENST00000496050 WDR38Q5JTN6 314 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 LCN1P1Q5VSP4 162 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 SUSD4Q5VX71 490 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 KIAA1161Q6NSJ0 714 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 C19orf48Q6RUI8 117 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 BTNL8Q6UX41 500 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 G2E3Q7L622 706 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 ANKRD33Q7Z3H0 272 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 MEX3DQ86XN8 651 aaKnown RBP4.95□□□□□ -1.62
SSR3-208ENST00000496050 STPG4Q8N801 248 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 SPC24Q8NBT2 197 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 OR13C3Q8NGS6 347 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 CKAP2Q8WWK9 683 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 TM9SF4Q92544 642 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 CENPTQ96BT3 561 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 SNRNP40Q96DI7 357 aaKnown RBP4.95□□□□□ -1.62
SSR3-208ENST00000496050 CCDC3Q9BQI4 270 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 PITPNM3Q9BZ71 974 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 ZNF556Q9HAH1 456 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 PDRG1Q9NUG6 133 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 CNIH4Q9P003 139 aa4.95□□□□□ -1.62
SSR3-208ENST00000496050 C13orf42A0A1B0GVH6 325 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 NPIPA3F8WFD2 350 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 P2RY10O00398 339 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 CTDSPLO15194 276 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 RTN2O75298 545 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 DFFBO76075 338 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 SLC16A8O95907 504 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 HLA-DPA1P20036 260 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 CYP2A7P20853 494 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 CD27P26842 260 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 CTNNB1P35222 781 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 NKX2-1P43699 371 aaPredicted RBP4.94□□□□□ -1.62
SSR3-208ENST00000496050 IER3P46695 156 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 KHKP50053 298 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 KCNJ10P78508 379 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 OPCMLQ14982 345 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 ZRSR1Q15695 479 aaKnown RBP4.94□□□□□ -1.62
SSR3-208ENST00000496050 IQCCQ4KMZ1 466 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 XKR3Q5GH77 459 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 SLC35E4Q6ICL7 350 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 IL17RELQ6ZVW7 336 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 KCTD9Q7L273 389 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 SLC26A9Q7LBE3 791 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 PIGWQ7Z7B1 504 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 SIAH3Q8IW03 269 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 AMER3Q8N944 861 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 KLHDC9Q8NEP7 349 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 PSMA8Q8TAA3 256 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 METTL21AQ8WXB1 218 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 KRTAP4-2Q9BYR5 136 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 SLC5A7Q9GZV3 580 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 C10orf88Q9H8K7 445 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 RNF121Q9H920 327 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 ZNF334Q9HCZ1 680 aaPredicted RBP4.94□□□□□ -1.62
SSR3-208ENST00000496050 PPANQ9NQ55 473 aaKnown RBP4.94□□□□□ -1.62
SSR3-208ENST00000496050 C19orf25Q9UFG5 118 aaPredicted RBP4.94□□□□□ -1.62
SSR3-208ENST00000496050 MAN1B1Q9UKM7 699 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 GRID1Q9ULK0 1009 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 TNNQ9UQP3 1299 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 KNSTRNQ9Y448 316 aa4.94□□□□□ -1.62
SSR3-208ENST00000496050 TRAV18A0A075B6X5 111 aa4.93□□□□□ -1.62
SSR3-208ENST00000496050 IGHV4-61A0A0C4DH41 118 aa4.93□□□□□ -1.62
SSR3-208ENST00000496050 A0A0G2JLW4 131 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms