RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 CDC42EP4Q9H3Q1 356 aaKnown RBP17.75■□□□□ 0.43
CHTOP-202ENST00000368687 NINJ2Q9NZG7 142 aa17.75■□□□□ 0.43
CHTOP-202ENST00000368687 KLHL20Q9Y2M5 609 aa17.75■□□□□ 0.43
CHTOP-202ENST00000368687 MTO1Q9Y2Z2 717 aaKnown RBP17.75■□□□□ 0.43
CHTOP-202ENST00000368687 OARD1Q9Y530 152 aa17.75■□□□□ 0.43
CHTOP-202ENST00000368687 IKBKGQ9Y6K9 419 aa17.75■□□□□ 0.43
CHTOP-202ENST00000368687 FITM1A5D6W6 292 aa17.74■□□□□ 0.43
CHTOP-202ENST00000368687 TK2O00142 265 aa17.74■□□□□ 0.43
CHTOP-202ENST00000368687 PIAS1O75925 651 aa17.74■□□□□ 0.43
CHTOP-202ENST00000368687 ANXA5P08758 320 aa17.74■□□□□ 0.43
CHTOP-202ENST00000368687 PTPN4P29074 926 aa17.74■□□□□ 0.43
CHTOP-202ENST00000368687 ECHS1P30084 290 aa17.74■□□□□ 0.43
CHTOP-202ENST00000368687 GRK3P35626 688 aa17.74■□□□□ 0.43
CHTOP-202ENST00000368687 SRSF6Q13247 344 aaKnown RBP17.74■□□□□ 0.43
CHTOP-202ENST00000368687 PPP1R3AQ16821 1122 aa17.74■□□□□ 0.43
CHTOP-202ENST00000368687 CDKL4Q5MAI5 379 aa17.74■□□□□ 0.43
CHTOP-202ENST00000368687 ZNF425Q6IV72 752 aa17.74■□□□□ 0.43
CHTOP-202ENST00000368687 LCTLQ6UWM7 567 aa17.74■□□□□ 0.43
CHTOP-202ENST00000368687 TMEM207Q6UWW9 146 aa17.74■□□□□ 0.43
CHTOP-202ENST00000368687 SYVN1Q86TM6 617 aa17.74■□□□□ 0.43
CHTOP-202ENST00000368687 PAQR7Q86WK9 346 aa17.74■□□□□ 0.43
CHTOP-202ENST00000368687 C17orf64Q86WR6 236 aa17.74■□□□□ 0.43
CHTOP-202ENST00000368687 TCAIMQ8N3R3 496 aa17.74■□□□□ 0.43
CHTOP-202ENST00000368687 ZNF655Q8N720 491 aaPredicted RBP17.74■□□□□ 0.43
CHTOP-202ENST00000368687 SLC6A20Q9NP91 592 aa17.74■□□□□ 0.43
CHTOP-202ENST00000368687 TMEM184CQ9NVA4 438 aa17.74■□□□□ 0.43
CHTOP-202ENST00000368687 MDC1Q14676 2089 aaKnown RBP17.73■□□□□ 0.43
CHTOP-202ENST00000368687 A0A1B0GX78 115 aa17.73■□□□□ 0.43
CHTOP-202ENST00000368687 CTSVO60911 334 aa17.73■□□□□ 0.43
CHTOP-202ENST00000368687 WISP3O95389 354 aaPredicted RBP17.73■□□□□ 0.43
CHTOP-202ENST00000368687 DCDP81605 110 aaKnown RBP17.73■□□□□ 0.43
CHTOP-202ENST00000368687 CDC20Q12834 499 aa17.73■□□□□ 0.43
CHTOP-202ENST00000368687 NAE1Q13564 534 aa17.73■□□□□ 0.43
CHTOP-202ENST00000368687 ZNF460Q14592 562 aa17.73■□□□□ 0.43
CHTOP-202ENST00000368687 RAPH1Q70E73 1250 aa17.73■□□□□ 0.43
CHTOP-202ENST00000368687 TRMT10CQ7L0Y3 403 aaKnown RBP17.73■□□□□ 0.43
CHTOP-202ENST00000368687 ADCK2Q7Z695 626 aa17.73■□□□□ 0.43
CHTOP-202ENST00000368687 TBC1D1Q86TI0 1168 aaPredicted RBP17.73■□□□□ 0.43
CHTOP-202ENST00000368687 TBC1D19Q8N5T2 526 aa17.73■□□□□ 0.43
CHTOP-202ENST00000368687 SLC38A9Q8NBW4 561 aa17.73■□□□□ 0.43
CHTOP-202ENST00000368687 OR56A3Q8NH54 315 aa17.73■□□□□ 0.43
CHTOP-202ENST00000368687 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.73■□□□□ 0.43
CHTOP-202ENST00000368687 THAP11Q96EK4 314 aa17.73■□□□□ 0.43
CHTOP-202ENST00000368687 SPRTNQ9H040 489 aaPredicted RBP17.73■□□□□ 0.43
CHTOP-202ENST00000368687 IL17BQ9UHF5 180 aa17.73■□□□□ 0.43
CHTOP-202ENST00000368687 A0A087WUV0 522 aaPredicted RBP17.72■□□□□ 0.43
CHTOP-202ENST00000368687 NPEPPSL1A6NEC2 478 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 ATXN7O15265 892 aaPredicted RBP17.72■□□□□ 0.43
CHTOP-202ENST00000368687 KATNA1O75449 491 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 CREG1O75629 220 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 ACSL3O95573 720 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 INHBAP08476 426 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 ABHD2P08910 425 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 RHOXF2BP0C7M4 288 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 CCDC166P0CW27 439 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 SFTPCP11686 197 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 WT1P19544 449 aaPredicted RBP17.72■□□□□ 0.43
CHTOP-202ENST00000368687 CNTFP26441 200 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 SERPINB9P50453 376 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 VSX2P58304 361 aaPredicted RBP17.72■□□□□ 0.43
CHTOP-202ENST00000368687 RPS15AP62244 130 aaKnown RBP17.72■□□□□ 0.43
CHTOP-202ENST00000368687 NCF4Q15080 339 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 TAF1BQ53T94 588 aaPredicted RBP17.72■□□□□ 0.43
CHTOP-202ENST00000368687 PRAMEF17Q5VTA0 474 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 ZNF385CQ66K41 422 aaPredicted RBP17.72■□□□□ 0.43
CHTOP-202ENST00000368687 PCSK4Q6UW60 755 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 MVB12AQ96EY5 273 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 UBXN10Q96LJ8 280 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 GBP5Q96PP8 586 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 RHOXF2Q9BQY4 288 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 ATG10Q9H0Y0 220 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 CHST8Q9H2A9 424 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 ACTL8Q9H568 366 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 CNOT10Q9H9A5 744 aaKnown RBP17.72■□□□□ 0.43
CHTOP-202ENST00000368687 CAB39LQ9H9S4 337 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 NMRAL1Q9HBL8 299 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 ABCF3Q9NUQ8 709 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 GPN3Q9UHW5 284 aaPredicted RBP17.72■□□□□ 0.43
CHTOP-202ENST00000368687 NFU1Q9UMS0 254 aa17.72■□□□□ 0.43
CHTOP-202ENST00000368687 FARSAQ9Y285 508 aaKnown RBP17.72■□□□□ 0.43
CHTOP-202ENST00000368687 A0A087X1B8 175 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 IGKV1-8A0A0C4DH67 115 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 A0A0J9YVX5 310 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 DSCR3O14972 297 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 HCRTR1O43613 425 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 ZNF500O60304 480 aaPredicted RBP17.71■□□□□ 0.43
CHTOP-202ENST00000368687 IPO13O94829 963 aaKnown RBP17.71■□□□□ 0.43
CHTOP-202ENST00000368687 GUCA1CO95843 209 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 GCGRP47871 477 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 MUM1Q2TAK8 710 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 WASHC2DQ5SRD0 308 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 GARNL3Q5VVW2 1013 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 PRMT9Q6P2P2 845 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 BORAQ6PGQ7 559 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 MBOAT1Q6ZNC8 495 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 ANKRD49Q8WVL7 239 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 THAP4Q8WY91 577 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 TTC9Q92623 222 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 FKBP10Q96AY3 582 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 EGFL8Q99944 293 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms