RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 DDA1Q9BW61 102 aa12.14□□□□□ -0.47
RETREG3-203ENST00000585894 SYNPO2LQ9H987 977 aa12.14□□□□□ -0.47
RETREG3-203ENST00000585894 CCDC177Q9NQR7 707 aaPredicted RBP12.14□□□□□ -0.47
RETREG3-203ENST00000585894 DKK4Q9UBT3 224 aa12.14□□□□□ -0.47
RETREG3-203ENST00000585894 TLK1Q9UKI8 766 aa12.14□□□□□ -0.47
RETREG3-203ENST00000585894 RARRES3Q9UL19 164 aa12.14□□□□□ -0.47
RETREG3-203ENST00000585894 RAB21Q9UL25 225 aa12.14□□□□□ -0.47
RETREG3-203ENST00000585894 NOVA2Q9UNW9 492 aaKnown RBP12.14□□□□□ -0.47
RETREG3-203ENST00000585894 PCDHGA7Q9Y5G6 932 aa12.14□□□□□ -0.47
RETREG3-203ENST00000585894 PCDHGA3Q9Y5H0 932 aa12.14□□□□□ -0.47
RETREG3-203ENST00000585894 A0A087X1B8 175 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 ZNF839A8K0R7 811 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 RFPL1O75677 317 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 KRT37O76014 449 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 SNRPAP09012 282 aaKnown RBP12.13□□□□□ -0.47
RETREG3-203ENST00000585894 CMPK1P30085 196 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 AP1S2P56377 157 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 RAB15P59190 212 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 ATP6V0D1P61421 351 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 ACY1Q03154 408 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 SRSF6Q13247 344 aaKnown RBP12.13□□□□□ -0.47
RETREG3-203ENST00000585894 TGFBIQ15582 683 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 TMEM164Q5U3C3 297 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 PRAMEF13Q5VWM6 474 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 EMBQ6PCB8 327 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 CEACAM20Q6UY09 585 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 ISCA2Q86U28 154 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 PPP1R3BQ86XI6 285 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 GPSM1Q86YR5 675 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 DNAJC22Q8N4W6 341 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 KDF1Q8NAX2 398 aaPredicted RBP12.13□□□□□ -0.47
RETREG3-203ENST00000585894 ANKRD7Q92527 254 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 CAVIN3Q969G5 261 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 ISL2Q96A47 359 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 KIAA1191Q96A73 305 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 TCTN2Q96GX1 697 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 OR4K3Q96R72 315 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 ULBP3Q9BZM4 244 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 MRPS30Q9NP92 439 aaKnown RBP12.13□□□□□ -0.47
RETREG3-203ENST00000585894 PCMTD2Q9NV79 361 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 INTS7Q9NVH2 962 aaKnown RBP12.13□□□□□ -0.47
RETREG3-203ENST00000585894 PSMC3IPQ9P2W1 217 aaPredicted RBP12.13□□□□□ -0.47
RETREG3-203ENST00000585894 ZMIZ1Q9ULJ6 1067 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 RNF112Q9ULX5 631 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 CFAP47Q6ZTR5 3102 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 PKD1L2Q7Z442 2459 aa12.13□□□□□ -0.47
RETREG3-203ENST00000585894 LAMA5O15230 3695 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 GOLGA8RI6L899 631 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 UBXN8O00124 270 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 STK17BO94768 372 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 KIAA0754O94854 1291 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 NTRK1P04629 796 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 FGF5P12034 268 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 GDF5P43026 501 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 PCBP4P57723 403 aaKnown RBP12.12□□□□□ -0.47
RETREG3-203ENST00000585894 PRDX1Q06830 199 aaKnown RBP12.12□□□□□ -0.47
RETREG3-203ENST00000585894 PTCHD3Q3KNS1 767 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 TIPARPQ7Z3E1 657 aaKnown RBP12.12□□□□□ -0.47
RETREG3-203ENST00000585894 ADCK2Q7Z695 626 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 PLD3Q8IV08 490 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 CYP4X1Q8N118 509 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 OR56A3Q8NH54 315 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 MZB1Q8WU39 189 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 TSNARE1Q96NA8 513 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 GPR78Q96P69 363 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 TMEM79Q9BSE2 394 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 SGPP1Q9BX95 441 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 ASPSCR1Q9BZE9 553 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 SPRTNQ9H040 489 aaPredicted RBP12.12□□□□□ -0.47
RETREG3-203ENST00000585894 NMRAL1Q9HBL8 299 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 STARD5Q9NSY2 213 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 CD274Q9NZQ7 290 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 ASB1Q9Y576 335 aa12.12□□□□□ -0.47
RETREG3-203ENST00000585894 A0A0J9YVX5 310 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 A0A1W2PPM1 405 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 SUPT3HB4E1H0 165 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 H7BY64 318 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 TAPBPO15533 448 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 SUPT3HO75486 399 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 KLHL2O95198 593 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 STATHP02808 62 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 ANXA5P08758 320 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 NPPBP16860 134 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 CNTFP26441 200 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 EIF2S3P41091 472 aaKnown RBP12.11□□□□□ -0.47
RETREG3-203ENST00000585894 IL11RAQ14626 422 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 FRMPD2BQ6IN97 320 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 CAPN13Q6MZZ7 669 aaPredicted RBP12.11□□□□□ -0.47
RETREG3-203ENST00000585894 SNIP1Q8TAD8 396 aaKnown RBP12.11□□□□□ -0.47
RETREG3-203ENST00000585894 N4BP2L2Q92802 583 aaPredicted RBP12.11□□□□□ -0.47
RETREG3-203ENST00000585894 RHBDF1Q96CC6 855 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 PRAP1Q96NZ9 151 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 ATOH8Q96SQ7 321 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 CCDC77Q9BR77 488 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 LOC105369274A0A096LPK9 316 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 LOC102723532A0A0G2JNH3 316 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 TLDC2A0PJX2 215 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 OR2A25A4D2G3 310 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 TMEM8BA6NDV4 472 aa12.11□□□□□ -0.47
RETREG3-203ENST00000585894 HAT1O14929 419 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms