RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, human

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRAT1-205	ENST00000473879	LRRC70	Q7Z2Q7	622 aa		12.84	□□□□□ -0.35
BRAT1-205	ENST00000473879	B3GNT8	Q7Z7M8	397 aa		12.84	□□□□□ -0.35
BRAT1-205	ENST00000473879	PHC3	Q8NDX5	983 aa		12.84	□□□□□ -0.35
BRAT1-205	ENST00000473879	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.84	□□□□□ -0.35
BRAT1-205	ENST00000473879	OR9A1P	Q8NGU1	263 aa		12.84	□□□□□ -0.35
BRAT1-205	ENST00000473879	SLC37A2	Q8TED4	501 aa		12.84	□□□□□ -0.35
BRAT1-205	ENST00000473879	PRR11	Q96HE9	360 aa	Predicted RBP	12.84	□□□□□ -0.35
BRAT1-205	ENST00000473879	RAB11FIP5	Q9BXF6	653 aa		12.84	□□□□□ -0.35
BRAT1-205	ENST00000473879	STRADB	Q9C0K7	418 aa		12.84	□□□□□ -0.35
BRAT1-205	ENST00000473879	GSTO2	Q9H4Y5	243 aa		12.84	□□□□□ -0.35
BRAT1-205	ENST00000473879	MVB12B	Q9H7P6	319 aa		12.84	□□□□□ -0.35
BRAT1-205	ENST00000473879	SLCO1B3	Q9NPD5	702 aa		12.84	□□□□□ -0.35
BRAT1-205	ENST00000473879	FGFR1OP2	Q9NVK5	253 aa		12.84	□□□□□ -0.35
BRAT1-205	ENST00000473879	SPATA7	Q9P0W8	599 aa		12.84	□□□□□ -0.35
BRAT1-205	ENST00000473879	OPTC	Q9UBM4	332 aa		12.84	□□□□□ -0.35
BRAT1-205	ENST00000473879	POLG2	Q9UHN1	485 aa		12.84	□□□□□ -0.35
BRAT1-205	ENST00000473879	PCTP	Q9UKL6	214 aa		12.84	□□□□□ -0.35
BRAT1-205	ENST00000473879	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	12.84	□□□□□ -0.35
BRAT1-205	ENST00000473879	APC2	O95996	2303 aa		12.84	□□□□□ -0.35
BRAT1-205	ENST00000473879	ZFYVE26	Q68DK2	2539 aa		12.84	□□□□□ -0.35
BRAT1-205	ENST00000473879	TRBV23OR9-2	A0A075B6M9	112 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	KIR2DS5	A0A0G2JLQ3	304 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879		A0A0G2JNG1	304 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879		K7EPI3	171 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	KIR2DS3	K7RE56	304 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	SIX3	O95343	332 aa	Predicted RBP	12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	CPNE6	O95741	557 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	FAM107A	O95990	144 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	MTHFD1	P11586	935 aa	Known RBP	12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	CD1C	P29017	333 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	RBMS1	P29558	406 aa	Known RBP	12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	GGT5	P36269	586 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	HSD17B2	P37059	387 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	EIF2S3	P41091	472 aa	Known RBP	12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	HSPA7	P48741	367 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	AGTR2	P50052	363 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	HK2	P52789	917 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	UBE2I	P63279	158 aa	Known RBP	12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	GABPB1	Q06547	395 aa	Predicted RBP	12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	PRKAA1	Q13131	559 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	KIR2DS5	Q14953	304 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	RPE65	Q16518	533 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	UNC50	Q53HI1	259 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	MBOAT1	Q6ZNC8	495 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	SLC9B2	Q86UD5	537 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	SLITRK4	Q8IW52	837 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	AFAP1L2	Q8N4X5	818 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	AVL9	Q8NBF6	648 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	OR5AR1	Q8NGP9	310 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	ZNF483	Q8TF39	744 aa	Predicted RBP	12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	SH3KBP1	Q96B97	665 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	SLC46A1	Q96NT5	459 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	FERD3L	Q96RJ6	166 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	INSM2	Q96T92	566 aa	Predicted RBP	12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	PKP4	Q99569	1192 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	DPYSL5	Q9BPU6	564 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	TMEM79	Q9BSE2	394 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	CD244	Q9BZW8	370 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	FAM107B	Q9H098	131 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	ILKAP	Q9H0C8	392 aa	Predicted RBP	12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	STN1	Q9H668	368 aa	Known RBP	12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	ASCL3	Q9NQ33	180 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	PRDM8	Q9NQV8	689 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	IMP3	Q9NV31	184 aa	Known RBP	12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	STOX2	Q9P2F5	926 aa	Predicted RBP	12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	LNPEP	Q9UIQ6	1025 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	WDR37	Q9Y2I8	494 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	RAP2C	Q9Y3L5	183 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	ANGPTL3	Q9Y5C1	460 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	COLEC10	Q9Y6Z7	277 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	LOC400499	M0QZD8	3231 aa		12.83	□□□□□ -0.36
BRAT1-205	ENST00000473879	IGHV1OR21-1	A0A087WYE8	117 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	E2F3	O00716	465 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	TAPBP	O15533	448 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	RRP8	O43159	456 aa	Known RBP	12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	ITM2A	O43736	263 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	CCNT2	O60583	730 aa	Known RBP	12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	KATNA1	O75449	491 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	LYPLA1	O75608	230 aa	Predicted RBP	12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	STK16	O75716	305 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	TGDS	O95455	350 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	DRD4	P21917	467 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	IMPA1	P29218	277 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	GPLD1	P80108	840 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	HHEX	Q03014	270 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	CLC	Q05315	142 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	LCP2	Q13094	533 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	ARHGAP19	Q14CB8	494 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	CLCA4	Q14CN2	919 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	RBBP7	Q16576	425 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	AMZ1	Q400G9	498 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	ARL13A	Q5H913	290 aa	Predicted RBP	12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	CES4A	Q5XG92	561 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	AGTRAP	Q6RW13	159 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	RAB11FIP2	Q7L804	512 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	TMPRSS9	Q7Z410	1059 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	WDR75	Q8IWA0	830 aa	Known RBP	12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	HOMEZ	Q8IX15	550 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	KLHDC8A	Q8IYD2	350 aa		12.82	□□□□□ -0.36

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