RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 TRPS1Q9UHF7 1281 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 G3BP2Q9UN86 482 aaKnown RBP11.7□□□□□ -0.54
USF1-203ENST00000368021 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.7□□□□□ -0.54
USF1-203ENST00000368021 A0A1W2PPC4 97 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 UGDHO60701 494 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 CLDN9O95484 217 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 CAPN1P07384 714 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 HGFP14210 728 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 EPORP19235 508 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 ARL1P40616 181 aaPredicted RBP11.7□□□□□ -0.54
USF1-203ENST00000368021 GNPDA1P46926 289 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 CD97P48960 835 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 THOP1P52888 689 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 XKR7Q5GH72 579 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 NXNQ6DKJ4 435 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 ENPP7Q6UWV6 458 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 NCCRP1Q6ZVX7 275 aaPredicted RBP11.7□□□□□ -0.54
USF1-203ENST00000368021 CROCCP3Q8IVE0 287 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 TBC1D21Q8IYX1 336 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 L3MBTL4Q8NA19 623 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 CADM4Q8NFZ8 388 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 NSL1Q96IY1 281 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 CDK15Q96Q40 435 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 SLC29A3Q9BZD2 475 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 ATG10Q9H0Y0 220 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 ARRDC1-AS1Q9H2J1 176 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 ZNF385DQ9H6B1 395 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 CARS2Q9HA77 564 aaKnown RBP11.7□□□□□ -0.54
USF1-203ENST00000368021 GPR27Q9NS67 375 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 INTS7Q9NVH2 962 aaKnown RBP11.7□□□□□ -0.54
USF1-203ENST00000368021 LNPEPQ9UIQ6 1025 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 MOSPD1Q9UJG1 213 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 SLC22A14Q9Y267 594 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 CA5BQ9Y2D0 317 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 GPSM3Q9Y4H4 160 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 TIMM22Q9Y584 194 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 THADAQ6YHU6 1953 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 PLXND1Q9Y4D7 1925 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 GVINP1Q7Z2Y8 2422 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 KRT87PA6NCN2 255 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 PRR5-ARHGAP8B1AHC4 643 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 CBX6O95503 412 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 IDSP22304 550 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 MAOBP27338 520 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 HSD17B2P37059 387 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 CTBSQ01459 385 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 NAE1Q13564 534 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 UBAP2LQ14157 1087 aaKnown RBP11.69□□□□□ -0.54
USF1-203ENST00000368021 PTK2BQ14289 1009 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 ARHGAP19Q14CB8 494 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 PMS2CLQ68D20 193 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 Q6ZSR6 202 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 LPCAT2Q7L5N7 544 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 THOC6Q86W42 341 aaKnown RBP11.69□□□□□ -0.54
USF1-203ENST00000368021 TREML1Q86YW5 311 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 DDIASQ8IXT1 998 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 DCBLD1Q8N8Z6 715 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 ZNF480Q8WV37 535 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 WDR60Q8WVS4 1066 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 OR1E3Q8WZA6 343 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 SLC35B4Q969S0 331 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 PYCR2Q96C36 320 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 PTCD3Q96EY7 689 aaKnown RBP11.69□□□□□ -0.54
USF1-203ENST00000368021 PDXPQ96GD0 296 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 ZC3H10Q96K80 434 aaKnown RBP11.69□□□□□ -0.54
USF1-203ENST00000368021 C3orf30Q96M34 536 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 ORAI3Q9BRQ5 295 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 SMOC1Q9H4F8 434 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 ACTR8Q9H981 624 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 ARL8BQ9NVJ2 186 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 GPRC5BQ9NZH0 403 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 SCHIP1Q9P0W5 487 aaPredicted RBP11.69□□□□□ -0.54
USF1-203ENST00000368021 KLQ9UEF7 1012 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 GMEB2Q9UKD1 530 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 DGKBQ9Y6T7 804 aa11.69□□□□□ -0.54
USF1-203ENST00000368021 UBDO15205 165 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 NVLO15381 856 aaKnown RBP11.68□□□□□ -0.54
USF1-203ENST00000368021 PRR35P0CG20 571 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 ERGP11308 486 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 ITPKAP23677 461 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 RPL10P27635 214 aaKnown RBP11.68□□□□□ -0.54
USF1-203ENST00000368021 HMOX2P30519 316 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 SPEM2Q0P670 501 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 UAP1L1Q3KQV9 507 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 TPRG1LQ5T0D9 272 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 LIPJQ5W064 366 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 CAPN13Q6MZZ7 669 aaPredicted RBP11.68□□□□□ -0.54
USF1-203ENST00000368021 OGFOD2Q6N063 350 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 WASH2PQ6VEQ5 465 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 RGL4Q8IZJ4 473 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 SNX31Q8N9S9 440 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 PHC3Q8NDX5 983 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 OR5AR1Q8NGP9 310 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 HSPA12BQ96MM6 686 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 YIPF2Q9BWQ6 316 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 SGPP1Q9BX95 441 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 TRIT1Q9H3H1 467 aaKnown RBP11.68□□□□□ -0.54
USF1-203ENST00000368021 OSGEPL1Q9H4B0 414 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 AKTIPQ9H8T0 292 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 WASH6PQ9NQA3 447 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms