RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 OARD1Q9Y530 152 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 LTBP1Q14766 1721 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TBC1D3DA0A087WVF3 549 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TBC1D3IA0A087WXS9 549 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TBC1D3EA0A087X179 549 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TBC1D3KA0A087X1G2 549 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TBC1D3FA6NER0 549 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TBC1D3LB9A6J9 549 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 PITPNM1O00562 1244 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 DENRO43583 198 aaKnown RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 GNRH1P01148 92 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 IGLV3-25P01717 112 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 RPS17P08708 135 aaKnown RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TBC1D3HP0C7X1 549 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 CST5P28325 142 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 RPL3P39023 403 aaKnown RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 RXRGP48443 463 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 MAPK12P53778 367 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 PRMT2P55345 433 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 NTHL1P78549 312 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 BNIP3Q12983 259 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 ATAD3BQ5T9A4 648 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TBC1D3GQ6DHY5 549 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TBC1D3CQ6IPX1 549 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 CRTC1Q6UUV9 634 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 UTS2BQ765I0 119 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 OOSP2Q86WS3 158 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 KRT73Q86Y46 540 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TMEM126BQ8IUX1 230 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TBC1D3Q8IZP1 549 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 SVOPLQ8N434 492 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 OR4K1Q8NGD4 311 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 ZFP28Q8NHY6 868 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 PSMA8Q8TAA3 256 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 AIF1LQ9BQI0 150 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 KLF16Q9BXK1 252 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 SLC29A3Q9BZD2 475 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 CTPS2Q9NRF8 586 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 KLHL28Q9NXS3 571 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TMEM181Q9P2C4 612 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 PCDH10Q9P2E7 1040 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 RIMS3Q9UJD0 308 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 PLAGL1Q9UM63 463 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 USP22Q9UPT9 525 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 ATAD5Q96QE3 1844 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TTC34A8MYJ7 566 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 FOXD2O60548 495 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 SERPINI2O75830 405 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 NFATC1O95644 943 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 MMP2P08253 660 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 PABPC4LP0CB38 370 aaKnown RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 ITGA2P17301 1181 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 SYN1P17600 705 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 CTGFP29279 349 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 DPP6P42658 865 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 DEFB103AP81534 67 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 MRPS15P82914 257 aaKnown RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 C1DQ13901 141 aaKnown RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 GANABQ14697 944 aaKnown RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TJAP1Q5JTD0 557 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 CTSL3PQ5NE16 218 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 PPP4R4Q6NUP7 873 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 KIAA1324Q6UXG2 1013 aaKnown RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 ZNF783Q6ZMS7 281 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TEX26Q8N6G2 289 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 GPR26Q8NDV2 337 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 LINC00597Q9H2U6 94 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 RPF2Q9H7B2 306 aaKnown RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 HCFC1R1Q9NWW0 138 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 PNMA8CA0A1B0GUJ8 204 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 A0A1W2PPW3 197 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 RGS10O43665 173 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 OR1F1O43749 312 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 TPST2O60704 377 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 GSRP00390 522 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 SBK3P0C264 359 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 RFC2P35250 354 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 RPS13P62277 151 aaKnown RBP8.23□□□□□ -1.09
PTPRK-206ENST00000368215 FAM189BP81408 668 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 FAM46CQ5VWP2 391 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 SLC8B1Q6J4K2 584 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 ENPP6Q6UWR7 440 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 HACD2Q6Y1H2 254 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 CROCCP3Q8IVE0 287 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 TSPEARQ8WU66 669 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 TMIGD2Q96BF3 282 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 ZSCAN5AQ9BUG6 496 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 TPT1P8Q9HAU6 139 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 TIMMDC1Q9NPL8 285 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 PAIP2BQ9ULR5 123 aaKnown RBP8.23□□□□□ -1.09
PTPRK-206ENST00000368215 TMEM98Q9Y2Y6 226 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 KLK1P06870 262 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 SRCP12931 536 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 HSD17B1P14061 328 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 CD1EP15812 388 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 MAPK9P45984 424 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 CDK9P50750 372 aaKnown RBP8.23□□□□□ -1.09
PTPRK-206ENST00000368215 ALDH3A2P51648 485 aa8.23□□□□□ -1.09
PTPRK-206ENST00000368215 TGM3Q08188 693 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms