RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 ANKZF1Q9H8Y5 726 aa14.48□□□□□ -0.09
RNF4-210ENST00000508235 CAB39LQ9H9S4 337 aa14.48□□□□□ -0.09
RNF4-210ENST00000508235 RARRES3Q9UL19 164 aa14.48□□□□□ -0.09
RNF4-210ENST00000508235 PDE10AQ9Y233 779 aa14.48□□□□□ -0.09
RNF4-210ENST00000508235 B3GALT1Q9Y5Z6 326 aa14.48□□□□□ -0.09
RNF4-210ENST00000508235 SPEGQ15772 3267 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 ANKRD12Q6UB98 2062 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 C9orf172C9J069 976 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 RIPK2O43353 540 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 CCNDBP1O95273 360 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 FAM153BP0C7A2 387 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 FGF5P12034 268 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 ST6GAL1P15907 406 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 CCND1P24385 295 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 CMPK1P30085 196 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 PEBP1P30086 187 aaKnown RBP14.47□□□□□ -0.09
RNF4-210ENST00000508235 RPA3P35244 121 aaPredicted RBP14.47□□□□□ -0.09
RNF4-210ENST00000508235 MSH2P43246 934 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 SH3BP2P78314 561 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 ZNF460Q14592 562 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 FAM153CQ494X1 144 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 LGSNQ5TDP6 509 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 ADAMTSL2Q86TH1 951 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 TAX1BP1Q86VP1 789 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 C2orf73Q8N5S3 287 aaPredicted RBP14.47□□□□□ -0.09
RNF4-210ENST00000508235 LMNTD1Q8N9Z9 388 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 ZNF480Q8WV37 535 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 SLC44A1Q8WWI5 657 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 ATL1Q8WXF7 558 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 N4BP2L2Q92802 583 aaPredicted RBP14.47□□□□□ -0.09
RNF4-210ENST00000508235 PPM1MQ96MI6 270 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 PAFAH2Q99487 392 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 CCDC77Q9BR77 488 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 TXLNGYQ9BZA5 131 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 FGF21Q9NSA1 209 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 ARL15Q9NXU5 204 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 UTP6Q9NYH9 597 aaKnown RBP14.47□□□□□ -0.09
RNF4-210ENST00000508235 CTNNAL1Q9UBT7 734 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 ZNF180Q9UJW8 692 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 ADAMTS6Q9UKP5 1117 aa14.47□□□□□ -0.09
RNF4-210ENST00000508235 EXOC1LA0A1B0GW35 172 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 TARM1B6A8C7 271 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.46□□□□□ -0.09
RNF4-210ENST00000508235 STMND1H3BQB6 276 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 PHGDHO43175 533 aaKnown RBP14.46□□□□□ -0.09
RNF4-210ENST00000508235 PRICKLE3O43900 615 aaPredicted RBP14.46□□□□□ -0.09
RNF4-210ENST00000508235 KRT38O76015 456 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 EBLN1P0CF75 366 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 CCDC166P0CW27 439 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 PVRP15151 417 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 FOLR1P15328 257 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 SLC26A3P40879 764 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 EIF2S3P41091 472 aaKnown RBP14.46□□□□□ -0.09
RNF4-210ENST00000508235 SERPINB8P50452 374 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 PGGT1BP53609 377 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 ATP6V0D1P61421 351 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 TSTA3Q13630 321 aaPredicted RBP14.46□□□□□ -0.09
RNF4-210ENST00000508235 FASTKQ14296 549 aaKnown RBP14.46□□□□□ -0.09
RNF4-210ENST00000508235 KCNAB1Q14722 419 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 PHKG1Q16816 387 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.46□□□□□ -0.09
RNF4-210ENST00000508235 MROH9Q5TGP6 573 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 LRRC69Q6ZNQ3 347 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 FRA10AC1Q70Z53 315 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 TBC1D1Q86TI0 1168 aaPredicted RBP14.46□□□□□ -0.09
RNF4-210ENST00000508235 TRIM73Q86UV7 250 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 OR2L3Q8NG85 312 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 KCNE4Q8WWG9 221 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 DLG3Q92796 817 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 ZUFSPQ96AP4 578 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 MRRFQ96E11 262 aaKnown RBP14.46□□□□□ -0.09
RNF4-210ENST00000508235 CTRCQ99895 268 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 DPH1Q9BZG8 443 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 PCBD2Q9H0N5 130 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 FOXJ2Q9P0K8 574 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 STOX2Q9P2F5 926 aaPredicted RBP14.46□□□□□ -0.09
RNF4-210ENST00000508235 SERTAD3Q9UJW9 196 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 TLK1Q9UKI8 766 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 ZMIZ1Q9ULJ6 1067 aa14.46□□□□□ -0.09
RNF4-210ENST00000508235 SNRNP200O75643 2136 aaKnown RBP14.45□□□□□ -0.1
RNF4-210ENST00000508235 A0A087X1B8 175 aa14.45□□□□□ -0.1
RNF4-210ENST00000508235 A0A1W2PPV9 198 aa14.45□□□□□ -0.1
RNF4-210ENST00000508235 KRT87PA6NCN2 255 aa14.45□□□□□ -0.1
RNF4-210ENST00000508235 E7ENX8 843 aa14.45□□□□□ -0.1
RNF4-210ENST00000508235 POC1B-GALNT4F8VUJ3 575 aa14.45□□□□□ -0.1
RNF4-210ENST00000508235 TLX3O43711 291 aaPredicted RBP14.45□□□□□ -0.1
RNF4-210ENST00000508235 WISP3O95389 354 aaPredicted RBP14.45□□□□□ -0.1
RNF4-210ENST00000508235 LIPCP11150 499 aa14.45□□□□□ -0.1
RNF4-210ENST00000508235 MAGP20916 626 aa14.45□□□□□ -0.1
RNF4-210ENST00000508235 IMPA1P29218 277 aa14.45□□□□□ -0.1
RNF4-210ENST00000508235 ABATP80404 500 aa14.45□□□□□ -0.1
RNF4-210ENST00000508235 CDKL1Q00532 357 aa14.45□□□□□ -0.1
RNF4-210ENST00000508235 TAP2Q03519 686 aa14.45□□□□□ -0.1
RNF4-210ENST00000508235 ST3GAL2Q16842 350 aa14.45□□□□□ -0.1
RNF4-210ENST00000508235 TAF1BQ53T94 588 aaPredicted RBP14.45□□□□□ -0.1
RNF4-210ENST00000508235 ZC3H12BQ5HYM0 836 aaKnown RBP14.45□□□□□ -0.1
RNF4-210ENST00000508235 UBAP2Q5T6F2 1119 aaKnown RBP14.45□□□□□ -0.1
RNF4-210ENST00000508235 THEMIS2Q5TEJ8 643 aa14.45□□□□□ -0.1
RNF4-210ENST00000508235 WDR93Q6P2C0 686 aa14.45□□□□□ -0.1
RNF4-210ENST00000508235 SBSNQ6UWP8 590 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 747.9 ms