RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 TUBD1Q9UJT1 453 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 TCFL5Q9UL49 500 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 SNX7Q9UNH6 387 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 MED16Q9Y2X0 877 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 ANKRD12Q6UB98 2062 aa10.21□□□□□ -0.78
NELFE-213ENST00000494956 CTAGE9A4FU28 777 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 E5RI56 91 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 FANCGO15287 622 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 ZSCAN9O15535 394 aaPredicted RBP10.2□□□□□ -0.78
NELFE-213ENST00000494956 ZSCAN12O43309 604 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 MAP3K7O43318 606 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 CTSVO60911 334 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 RFPL1O75677 317 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 HAUS5O94927 633 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 MED26O95402 600 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 MATN4O95460 622 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 RPN2P04844 631 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 MLNP12872 115 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 PAMP19021 973 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 ITGAXP20702 1163 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 FNTAP49354 379 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 CLCN7P51798 805 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 PGGT1BP53609 377 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 TLE1Q04724 770 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 THOC5Q13769 683 aaKnown RBP10.2□□□□□ -0.78
NELFE-213ENST00000494956 MDC1Q14676 2089 aaKnown RBP10.2□□□□□ -0.78
NELFE-213ENST00000494956 NCF4Q15080 339 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 PPP1R7Q15435 360 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 SF1Q15637 639 aaKnown RBP10.2□□□□□ -0.78
NELFE-213ENST00000494956 IGFBP7Q16270 282 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 LACTB2Q53H82 288 aaPredicted RBP10.2□□□□□ -0.78
NELFE-213ENST00000494956 TENM4Q6N022 2769 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 MCATQ8IVS2 390 aaKnown RBP10.2□□□□□ -0.78
NELFE-213ENST00000494956 IGDCC3Q8IVU1 814 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 KLHL7Q8IXQ5 586 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 PPIL6Q8IXY8 311 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 ZBTB2Q8N680 514 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 METTL27Q8N6F8 245 aaPredicted RBP10.2□□□□□ -0.78
NELFE-213ENST00000494956 PPFIBP2Q8ND30 876 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 GSDMBQ8TAX9 411 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 RAD51AP1Q96B01 352 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 GBP5Q96PP8 586 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 ACAT2Q9BWD1 397 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 SYNPO2LQ9H987 977 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 XAB2Q9HCS7 855 aaKnown RBP10.2□□□□□ -0.78
NELFE-213ENST00000494956 SLC22A11Q9NSA0 550 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 IARS2Q9NSE4 1012 aaKnown RBP10.2□□□□□ -0.78
NELFE-213ENST00000494956 C20orf96Q9NUD7 363 aaPredicted RBP10.2□□□□□ -0.78
NELFE-213ENST00000494956 ABCF3Q9NUQ8 709 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 EURLQ9NYK6 297 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 HEATR5BQ9P2D3 2071 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 ASIC3Q9UHC3 531 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 PLCL2Q9UPR0 1127 aa10.2□□□□□ -0.78
NELFE-213ENST00000494956 LOC105369274A0A096LPK9 316 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 LOC102723532A0A0G2JNH3 316 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 A0A0J9YVX5 310 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 A6NL46 340 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 DNALI1O14645 258 aaPredicted RBP10.19□□□□□ -0.78
NELFE-213ENST00000494956 KPNA5O15131 536 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 KDM1AO60341 852 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 KLF7O75840 302 aaPredicted RBP10.19□□□□□ -0.78
NELFE-213ENST00000494956 USP1O94782 785 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 WISP1O95388 367 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 ESR1P03372 595 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 RAB40ALP0C0E4 278 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 ERVK-10P10266 1014 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 ALAS2P22557 587 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 IVDP26440 423 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 OTX2P32243 289 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 MRPS25P82663 173 aaKnown RBP10.19□□□□□ -0.78
NELFE-213ENST00000494956 DHX9Q08211 1270 aaKnown RBP10.19□□□□□ -0.78
NELFE-213ENST00000494956 TSTA3Q13630 321 aaPredicted RBP10.19□□□□□ -0.78
NELFE-213ENST00000494956 RAPSNQ13702 412 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 ATP1A4Q13733 1029 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 LONRF1Q17RB8 773 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 HSP90AA5PQ58FG0 334 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 RNF187Q5TA31 235 aaPredicted RBP10.19□□□□□ -0.78
NELFE-213ENST00000494956 FRMPD2BQ6IN97 320 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 RHBDD2Q6NTF9 364 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 ASB18Q6ZVZ8 466 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 OR4N4Q8N0Y3 316 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 OR2L3Q8NG85 312 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 OR2A1Q8NGT9 310 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 TCF12Q99081 682 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 NAP1L3Q99457 506 aaPredicted RBP10.19□□□□□ -0.78
NELFE-213ENST00000494956 PKP4Q99569 1192 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 NDNQ99608 321 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 GPR21Q99679 349 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 TRIM51Q9BSJ1 452 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 ING2Q9H160 280 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 SLC6A20Q9NP91 592 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 FBXO5Q9UKT4 447 aa10.19□□□□□ -0.78
NELFE-213ENST00000494956 GOLGA6L10A0A0M3HER8 536 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 C9J4A7 227 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 MKRN2OSH3BPM6 223 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 ALOX12BO75342 701 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 PSIP1O75475 530 aaKnown RBP10.18□□□□□ -0.78
NELFE-213ENST00000494956 RECKO95980 971 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 AGXTP21549 392 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 GCGRP47871 477 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms