RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 QKIQ96PU8 341 aaKnown RBP eCLIP16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 VAT1Q99536 393 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 TREX2Q9BQ50 279 aaPredicted RBP16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 ENKD1Q9H0I2 346 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 GBA3Q9H227 469 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 C10orf88Q9H8K7 445 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 C3orf18Q9UK00 162 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 ZNF835Q9Y2P0 537 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 NEU2Q9Y3R4 380 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 ACANP16112 2415 aa16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 SLC5A10A0PJK1 596 aa16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 LIN7AO14910 233 aaPredicted RBP16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 SERPINA7P05543 415 aa16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 GSTM1P09488 218 aa16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 ZGLP1P0C6A0 271 aa16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 ARHGAP25P42331 645 aa16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 CARSP49589 748 aaKnown RBP16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 ZBED6P86452 979 aa16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 GSTM4Q03013 218 aa16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 GRM7Q14831 915 aa16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 BRD3Q15059 726 aa16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 ZNF449Q6P9G9 518 aa16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 BZW1Q7L1Q6 419 aaKnown RBP16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 CEP97Q8IW35 865 aa16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 SLC35G2Q8TBE7 412 aa16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 VPS50Q96JG6 964 aa16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 DNAJC1Q96KC8 554 aaKnown RBP16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 C19orf43Q9BQ61 176 aa16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 BPIFA3Q9BQP9 254 aa16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 CAPN11Q9UMQ6 739 aa16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 HYOU1Q9Y4L1 999 aa16.4■□□□□ 0.22
UBE2D4-209ENST00000454428 IGLV3-12A0A075B6K2 115 aa16.39■□□□□ 0.21
UBE2D4-209ENST00000454428 NSG1A0A0A6YYJ2 146 aa16.39■□□□□ 0.21
UBE2D4-209ENST00000454428 CTSVO60911 334 aa16.39■□□□□ 0.21
UBE2D4-209ENST00000454428 BMP10O95393 424 aa16.39■□□□□ 0.21
UBE2D4-209ENST00000454428 CRTAMO95727 393 aa16.39■□□□□ 0.21
UBE2D4-209ENST00000454428 NSG1P42857 185 aa16.39■□□□□ 0.21
UBE2D4-209ENST00000454428 SMSP52788 366 aa16.39■□□□□ 0.21
UBE2D4-209ENST00000454428 GEMP55040 296 aa16.39■□□□□ 0.21
UBE2D4-209ENST00000454428 GRB7Q14451 532 aa16.39■□□□□ 0.21
UBE2D4-209ENST00000454428 DBN1Q16643 649 aa16.39■□□□□ 0.21
UBE2D4-209ENST00000454428 HIBCHQ6NVY1 386 aaPredicted RBP16.39■□□□□ 0.21
UBE2D4-209ENST00000454428 FIGLAQ6QHK4 219 aa16.39■□□□□ 0.21
UBE2D4-209ENST00000454428 Q6ZPB1 254 aaPredicted RBP16.39■□□□□ 0.21
UBE2D4-209ENST00000454428 CLEC17AQ6ZS10 378 aa16.39■□□□□ 0.21
UBE2D4-209ENST00000454428 ARHGEF18Q6ZSZ5 1173 aa16.39■□□□□ 0.21
UBE2D4-209ENST00000454428 C2orf73Q8N5S3 287 aaPredicted RBP16.39■□□□□ 0.21
UBE2D4-209ENST00000454428 HAUS1Q96CS2 278 aa16.39■□□□□ 0.21
UBE2D4-209ENST00000454428 RNF32Q9H0A6 362 aa16.39■□□□□ 0.21
UBE2D4-209ENST00000454428 IL1RAPL1Q9NZN1 696 aa16.39■□□□□ 0.21
UBE2D4-209ENST00000454428 TRHDEQ9UKU6 1024 aa16.39■□□□□ 0.21
UBE2D4-209ENST00000454428 IGHV1-45A0A0A0MS14 117 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 H7C0S8 307 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 NRP2O60462 931 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 PRAMEF2O60811 474 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 AP2A2O94973 939 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 TMEM253P0C7T8 217 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 ITGAMP11215 1152 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 FDXRP22570 491 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 RAB28P51157 221 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 CSNK1G2P78368 415 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 EEF1A2Q05639 463 aaKnown RBP16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 RBPJQ06330 500 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 CACNG1Q06432 222 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 TFDP2Q14188 446 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 ASTE1Q2TB18 679 aaPredicted RBP16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 TCTE1Q5JU00 501 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 KAZNQ674X7 775 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 FAAH2Q6GMR7 532 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 MMP21Q8N119 569 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 ELMO1Q92556 727 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 MIEF2Q96C03 454 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 IL17FQ96PD4 163 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 SELENOSQ9BQE4 189 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 TMEM121Q9BTD3 319 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 TMUB1Q9BVT8 246 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 ZNF304Q9HCX3 659 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 LUC7LQ9NQ29 371 aaKnown RBP16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 DDX56Q9NY93 547 aaKnown RBP16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 STOX2Q9P2F5 926 aaPredicted RBP16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 CIDEBQ9UHD4 219 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 MEMO1Q9Y316 297 aa16.38■□□□□ 0.21
UBE2D4-209ENST00000454428 GTF3C1Q12789 2109 aa16.37■□□□□ 0.21
UBE2D4-209ENST00000454428 OR5H15A6NDH6 313 aa16.37■□□□□ 0.21
UBE2D4-209ENST00000454428 ANXA9O76027 345 aa16.37■□□□□ 0.21
UBE2D4-209ENST00000454428 GYPCP04921 128 aa16.37■□□□□ 0.21
UBE2D4-209ENST00000454428 ESRRAP11474 423 aaPredicted RBP16.37■□□□□ 0.21
UBE2D4-209ENST00000454428 TNNT1P13805 278 aa16.37■□□□□ 0.21
UBE2D4-209ENST00000454428 CD1EP15812 388 aa16.37■□□□□ 0.21
UBE2D4-209ENST00000454428 EFNA3P52797 238 aa16.37■□□□□ 0.21
UBE2D4-209ENST00000454428 VSX2P58304 361 aaPredicted RBP16.37■□□□□ 0.21
UBE2D4-209ENST00000454428 SLC18A3Q16572 532 aa16.37■□□□□ 0.21
UBE2D4-209ENST00000454428 ZC3H12BQ5HYM0 836 aaKnown RBP16.37■□□□□ 0.21
UBE2D4-209ENST00000454428 WASHC2DQ5SRD0 308 aa16.37■□□□□ 0.21
UBE2D4-209ENST00000454428 FRMPD2BQ6IN97 320 aa16.37■□□□□ 0.21
UBE2D4-209ENST00000454428 TAX1BP1Q86VP1 789 aa16.37■□□□□ 0.21
UBE2D4-209ENST00000454428 TTC29Q8NA56 475 aaPredicted RBP16.37■□□□□ 0.21
UBE2D4-209ENST00000454428 CHTF18Q8WVB6 975 aa16.37■□□□□ 0.21
UBE2D4-209ENST00000454428 P3H4Q92791 437 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms