RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 KLHL41O60662 606 aa20.19■□□□□ 0.82
VSX1-206ENST00000444511 AGFG2O95081 481 aa20.19■□□□□ 0.82
VSX1-206ENST00000444511 VAPBO95292 243 aa20.19■□□□□ 0.82
VSX1-206ENST00000444511 FKBP9O95302 570 aa20.19■□□□□ 0.82
VSX1-206ENST00000444511 UMODP07911 640 aa20.19■□□□□ 0.82
VSX1-206ENST00000444511 PIM1P11309 404 aaPredicted RBP20.19■□□□□ 0.82
VSX1-206ENST00000444511 MGAT1P26572 445 aa20.19■□□□□ 0.82
VSX1-206ENST00000444511 VARSP26640 1264 aaKnown RBP20.19■□□□□ 0.82
VSX1-206ENST00000444511 BDKRB1P46663 353 aa20.19■□□□□ 0.82
VSX1-206ENST00000444511 KCNJ1P48048 391 aa20.19■□□□□ 0.82
VSX1-206ENST00000444511 FOXL2P58012 376 aa20.19■□□□□ 0.82
VSX1-206ENST00000444511 MYBPC3Q14896 1274 aa20.19■□□□□ 0.82
VSX1-206ENST00000444511 PRR30Q53SZ7 412 aaPredicted RBP20.19■□□□□ 0.82
VSX1-206ENST00000444511 TCTE1Q5JU00 501 aa20.19■□□□□ 0.82
VSX1-206ENST00000444511 FCRL6Q6DN72 434 aa20.19■□□□□ 0.82
VSX1-206ENST00000444511 MRNIPQ6NTE8 343 aa20.19■□□□□ 0.82
VSX1-206ENST00000444511 PPP1R32Q7Z5V6 425 aa20.19■□□□□ 0.82
VSX1-206ENST00000444511 SDCCAG8Q86SQ7 713 aaPredicted RBP20.19■□□□□ 0.82
VSX1-206ENST00000444511 FKBP10Q96AY3 582 aa20.19■□□□□ 0.82
VSX1-206ENST00000444511 PSMG3-AS1Q96PY0 264 aa20.19■□□□□ 0.82
VSX1-206ENST00000444511 LRRC4CQ9HCJ2 640 aa20.19■□□□□ 0.82
VSX1-206ENST00000444511 SLC22A11Q9NSA0 550 aa20.19■□□□□ 0.82
VSX1-206ENST00000444511 NFS1Q9Y697 457 aa20.19■□□□□ 0.82
VSX1-206ENST00000444511 PCSK5Q92824 1860 aa20.19■□□□□ 0.82
VSX1-206ENST00000444511 PFDN6O15212 129 aa20.18■□□□□ 0.82
VSX1-206ENST00000444511 C1orf105O95561 183 aa20.18■□□□□ 0.82
VSX1-206ENST00000444511 CCDC175P0C221 793 aa20.18■□□□□ 0.82
VSX1-206ENST00000444511 CCNFP41002 786 aa20.18■□□□□ 0.82
VSX1-206ENST00000444511 GCGRP47871 477 aa20.18■□□□□ 0.82
VSX1-206ENST00000444511 CDK16Q00536 496 aa20.18■□□□□ 0.82
VSX1-206ENST00000444511 GRM7Q14831 915 aa20.18■□□□□ 0.82
VSX1-206ENST00000444511 CNSTQ6PJW8 725 aa20.18■□□□□ 0.82
VSX1-206ENST00000444511 CES3Q6UWW8 571 aa20.18■□□□□ 0.82
VSX1-206ENST00000444511 TTC29Q8NA56 475 aaPredicted RBP20.18■□□□□ 0.82
VSX1-206ENST00000444511 MFSD3Q96ES6 412 aa20.18■□□□□ 0.82
VSX1-206ENST00000444511 SELENOSQ9BQE4 189 aa20.18■□□□□ 0.82
VSX1-206ENST00000444511 KIFC1Q9BW19 673 aa20.18■□□□□ 0.82
VSX1-206ENST00000444511 SLC29A3Q9BZD2 475 aa20.18■□□□□ 0.82
VSX1-206ENST00000444511 MRM3Q9HC36 420 aaKnown RBP20.18■□□□□ 0.82
VSX1-206ENST00000444511 CUTCQ9NTM9 273 aa20.18■□□□□ 0.82
VSX1-206ENST00000444511 SYBUQ9NX95 663 aa20.18■□□□□ 0.82
VSX1-206ENST00000444511 RUVBL2Q9Y230 463 aaKnown RBP20.18■□□□□ 0.82
VSX1-206ENST00000444511 SEC16AO15027 2179 aa20.18■□□□□ 0.82
VSX1-206ENST00000444511 TARM1B6A8C7 271 aa20.17■□□□□ 0.82
VSX1-206ENST00000444511 DSCR3O14972 297 aa20.17■□□□□ 0.82
VSX1-206ENST00000444511 PRICKLE3O43900 615 aaPredicted RBP20.17■□□□□ 0.82
VSX1-206ENST00000444511 CEP104O60308 925 aa20.17■□□□□ 0.82
VSX1-206ENST00000444511 IPO13O94829 963 aaKnown RBP20.17■□□□□ 0.82
VSX1-206ENST00000444511 TPSB2P20231 275 aa20.17■□□□□ 0.82
VSX1-206ENST00000444511 MCM3P25205 808 aa20.17■□□□□ 0.82
VSX1-206ENST00000444511 FMO4P31512 558 aa20.17■□□□□ 0.82
VSX1-206ENST00000444511 TPSAB1Q15661 275 aa20.17■□□□□ 0.82
VSX1-206ENST00000444511 CCSMST1Q4G0I0 132 aa20.17■□□□□ 0.82
VSX1-206ENST00000444511 CTSL3PQ5NE16 218 aa20.17■□□□□ 0.82
VSX1-206ENST00000444511 RNF187Q5TA31 235 aaPredicted RBP20.17■□□□□ 0.82
VSX1-206ENST00000444511 YOD1Q5VVQ6 348 aaPredicted RBP20.17■□□□□ 0.82
VSX1-206ENST00000444511 LRRC8BQ6P9F7 803 aa20.17■□□□□ 0.82
VSX1-206ENST00000444511 OVCH1Q7RTY7 1134 aa20.17■□□□□ 0.82
VSX1-206ENST00000444511 MAGEC3Q8TD91 643 aa20.17■□□□□ 0.82
VSX1-206ENST00000444511 ZUFSPQ96AP4 578 aa20.17■□□□□ 0.82
VSX1-206ENST00000444511 MIPEPQ99797 713 aa20.17■□□□□ 0.82
VSX1-206ENST00000444511 ATP13A2Q9NQ11 1180 aa20.17■□□□□ 0.82
VSX1-206ENST00000444511 HOMER3Q9NSC5 361 aa20.17■□□□□ 0.82
VSX1-206ENST00000444511 TSR3Q9UJK0 312 aaKnown RBP20.17■□□□□ 0.82
VSX1-206ENST00000444511 GOLGA8KD6RF30 607 aa20.16■□□□□ 0.82
VSX1-206ENST00000444511 H3BMM5 538 aa20.16■□□□□ 0.82
VSX1-206ENST00000444511 GOLGA8TH3BQL2 631 aa20.16■□□□□ 0.82
VSX1-206ENST00000444511 AGPSO00116 658 aa20.16■□□□□ 0.82
VSX1-206ENST00000444511 ALBP02768 609 aa20.16■□□□□ 0.82
VSX1-206ENST00000444511 ITGAXP20702 1163 aa20.16■□□□□ 0.82
VSX1-206ENST00000444511 ARNTP27540 789 aa20.16■□□□□ 0.82
VSX1-206ENST00000444511 PSMB5P28074 263 aa20.16■□□□□ 0.82
VSX1-206ENST00000444511 TERF1P54274 439 aa20.16■□□□□ 0.82
VSX1-206ENST00000444511 ZNF662Q6ZS27 426 aa20.16■□□□□ 0.82
VSX1-206ENST00000444511 TMEM151BQ8IW70 566 aa20.16■□□□□ 0.82
VSX1-206ENST00000444511 IQCKQ8N0W5 287 aa20.16■□□□□ 0.82
VSX1-206ENST00000444511 TRIM58Q8NG06 486 aa20.16■□□□□ 0.82
VSX1-206ENST00000444511 TM9SF4Q92544 642 aa20.16■□□□□ 0.82
VSX1-206ENST00000444511 NACC2Q96BF6 587 aa20.16■□□□□ 0.82
VSX1-206ENST00000444511 BIRC8Q96P09 236 aa20.16■□□□□ 0.82
VSX1-206ENST00000444511 ZNF552Q9H707 407 aaPredicted RBP20.16■□□□□ 0.82
VSX1-206ENST00000444511 WDR54Q9H977 334 aa20.16■□□□□ 0.82
VSX1-206ENST00000444511 CDC23Q9UJX2 597 aa20.16■□□□□ 0.82
VSX1-206ENST00000444511 SOX13Q9UN79 622 aa20.16■□□□□ 0.82
VSX1-206ENST00000444511 B3GNT3Q9Y2A9 372 aa20.16■□□□□ 0.82
VSX1-206ENST00000444511 FAM169AQ9Y6X4 670 aa20.16■□□□□ 0.82
VSX1-206ENST00000444511 KRT87PA6NCN2 255 aa20.15■□□□□ 0.82
VSX1-206ENST00000444511 TCP11X1B4DZS4 312 aa20.15■□□□□ 0.82
VSX1-206ENST00000444511 MASP2O00187 686 aa20.15■□□□□ 0.82
VSX1-206ENST00000444511 NIPSNAP2O75323 286 aa20.15■□□□□ 0.82
VSX1-206ENST00000444511 MMP11P24347 488 aa20.15■□□□□ 0.82
VSX1-206ENST00000444511 CXCR5P32302 372 aa20.15■□□□□ 0.82
VSX1-206ENST00000444511 VSX2P58304 361 aaPredicted RBP20.15■□□□□ 0.82
VSX1-206ENST00000444511 SARNPP82979 210 aaKnown RBP20.15■□□□□ 0.82
VSX1-206ENST00000444511 TRIP13Q15645 432 aaPredicted RBP20.15■□□□□ 0.82
VSX1-206ENST00000444511 NKG7Q16617 165 aa20.15■□□□□ 0.82
VSX1-206ENST00000444511 TYSND1Q2T9J0 566 aa20.15■□□□□ 0.82
VSX1-206ENST00000444511 FAM214AQ32MH5 1076 aa20.15■□□□□ 0.82
VSX1-206ENST00000444511 PLEKHN1Q494U1 663 aaPredicted RBP20.15■□□□□ 0.82
VSX1-206ENST00000444511 OR2L3Q8NG85 312 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms