RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 FARSBQ9NSD9 589 aaKnown RBP17.61■□□□□ 0.41
CD40-201ENST00000372276 NEUROG3Q9Y4Z2 214 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 BRCA2P51587 3418 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 A8MX80 341 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 GNGT2O14610 69 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 PER2O15055 1255 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 MYO1DO94832 1006 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 ALPLP05186 524 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 EPORP19235 508 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 HNF4AP41235 474 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 PTCHD3Q3KNS1 767 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 SUSD1Q6UWL2 747 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 HIPK1Q86Z02 1210 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 PGBD3Q8N328 593 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 CLP1Q92989 425 aaKnown RBP17.6■□□□□ 0.41
CD40-201ENST00000372276 NRBF2Q96F24 287 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 CCDC138Q96M89 665 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 VPS35Q96QK1 796 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 HHIPQ96QV1 700 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 CPPED1Q9BRF8 314 aaPredicted RBP17.6■□□□□ 0.41
CD40-201ENST00000372276 SPATA9Q9BWV2 254 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 PIF1Q9H611 641 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 HPS4Q9NQG7 708 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 SPHK2Q9NRA0 654 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 MARK1Q9P0L2 795 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 TMEM9Q9P0T7 183 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 ZNHIT2Q9UHR6 403 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 BLOC1S6Q9UL45 172 aa17.6■□□□□ 0.41
CD40-201ENST00000372276 MYOCOSA0A1B0GUC4 107 aa17.59■□□□□ 0.41
CD40-201ENST00000372276 UPK1AO00322 258 aa17.59■□□□□ 0.41
CD40-201ENST00000372276 CREG1O75629 220 aa17.59■□□□□ 0.41
CD40-201ENST00000372276 CST1P01037 141 aa17.59■□□□□ 0.41
CD40-201ENST00000372276 GNAO1P09471 354 aa17.59■□□□□ 0.41
CD40-201ENST00000372276 GSTM1P09488 218 aa17.59■□□□□ 0.41
CD40-201ENST00000372276 GJA8P48165 433 aa17.59■□□□□ 0.41
CD40-201ENST00000372276 MNX1P50219 401 aaPredicted RBP17.59■□□□□ 0.41
CD40-201ENST00000372276 GSTM4Q03013 218 aa17.59■□□□□ 0.41
CD40-201ENST00000372276 IL18R1Q13478 541 aa17.59■□□□□ 0.41
CD40-201ENST00000372276 CBX2Q14781 532 aaPredicted RBP17.59■□□□□ 0.41
CD40-201ENST00000372276 ZNF284Q2VY69 593 aa17.59■□□□□ 0.41
CD40-201ENST00000372276 ZC3H12BQ5HYM0 836 aaKnown RBP17.59■□□□□ 0.41
CD40-201ENST00000372276 SERPINA11Q86U17 422 aa17.59■□□□□ 0.41
CD40-201ENST00000372276 TMEM25Q86YD3 366 aa17.59■□□□□ 0.41
CD40-201ENST00000372276 NRSN1Q8IZ57 195 aa17.59■□□□□ 0.41
CD40-201ENST00000372276 ZCCHC7Q8N3Z6 543 aaKnown RBP17.59■□□□□ 0.41
CD40-201ENST00000372276 OR2A12Q8NGT7 310 aa17.59■□□□□ 0.41
CD40-201ENST00000372276 OR5K1Q8NHB7 308 aa17.59■□□□□ 0.41
CD40-201ENST00000372276 NELL1Q92832 810 aa17.59■□□□□ 0.41
CD40-201ENST00000372276 TDP1Q9NUW8 608 aa17.59■□□□□ 0.41
CD40-201ENST00000372276 SLC25A37Q9NYZ2 338 aa17.59■□□□□ 0.41
CD40-201ENST00000372276 IFT80Q9P2H3 777 aaPredicted RBP17.59■□□□□ 0.41
CD40-201ENST00000372276 SAMD4AQ9UPU9 718 aaKnown RBP17.59■□□□□ 0.41
CD40-201ENST00000372276 ERVW-1Q9UQF0 538 aa17.59■□□□□ 0.41
CD40-201ENST00000372276 UPK3BL1B0FP48 263 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 UPK3BL2E5RIL1 263 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 NEDD8-MDP1E9PL57 170 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 BNIP3LO60238 219 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 CCNDBP1O95273 360 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 SRPRAP08240 638 aaKnown RBP17.58■□□□□ 0.41
CD40-201ENST00000372276 AMD1P17707 334 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 XPAP23025 273 aaPredicted RBP17.58■□□□□ 0.41
CD40-201ENST00000372276 SLC5A2P31639 672 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 MTAPQ13126 283 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 TUBA3CQ13748 450 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 THAP5Q7Z6K1 395 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 STK32CQ86UX6 486 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 MSRB3Q8IXL7 192 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 PJA1Q8NG27 643 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 ELMO1Q92556 727 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 GLMNQ92990 594 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 MAGED4Q96JG8 741 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 EPHX3Q9H6B9 360 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 BRF2Q9HAW0 419 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 FAM120CQ9NX05 1096 aaKnown RBP17.58■□□□□ 0.41
CD40-201ENST00000372276 ATXN10Q9UBB4 475 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 C3orf18Q9UK00 162 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 USP22Q9UPT9 525 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 RUVBL1Q9Y265 456 aaKnown RBP17.58■□□□□ 0.41
CD40-201ENST00000372276 PCDHB14Q9Y5E9 798 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 ORC6Q9Y5N6 252 aa17.58■□□□□ 0.41
CD40-201ENST00000372276 PSMD11O00231 422 aa17.58■□□□□ 0.4
CD40-201ENST00000372276 DNAJB5O75953 348 aa17.58■□□□□ 0.4
CD40-201ENST00000372276 SNAP29O95721 258 aa17.58■□□□□ 0.4
CD40-201ENST00000372276 CATP04040 527 aaKnown RBP17.58■□□□□ 0.4
CD40-201ENST00000372276 JUNBP17275 347 aaPredicted RBP17.58■□□□□ 0.4
CD40-201ENST00000372276 PPIBP23284 216 aaKnown RBP17.58■□□□□ 0.4
CD40-201ENST00000372276 HOXA9P31269 272 aa17.58■□□□□ 0.4
CD40-201ENST00000372276 KIR3DL1P43629 444 aa17.58■□□□□ 0.4
CD40-201ENST00000372276 ASMTP46597 345 aa17.58■□□□□ 0.4
CD40-201ENST00000372276 IRF8Q02556 426 aa17.58■□□□□ 0.4
CD40-201ENST00000372276 ISLR2Q6UXK2 745 aa17.58■□□□□ 0.4
CD40-201ENST00000372276 DPPA4Q7L190 304 aa17.58■□□□□ 0.4
CD40-201ENST00000372276 C8orf59Q8N0T1 100 aaPredicted RBP17.58■□□□□ 0.4
CD40-201ENST00000372276 KRTCAP2Q8N6L1 136 aa17.58■□□□□ 0.4
CD40-201ENST00000372276 WFIKKN2Q8TEU8 576 aa17.58■□□□□ 0.4
CD40-201ENST00000372276 FOPNLQ96NB1 174 aa17.58■□□□□ 0.4
CD40-201ENST00000372276 NPLQ9BXD5 320 aaPredicted RBP17.58■□□□□ 0.4
CD40-201ENST00000372276 ING2Q9H160 280 aa17.58■□□□□ 0.4
CD40-201ENST00000372276 SLCO3A1Q9UIG8 710 aa17.58■□□□□ 0.4
CD40-201ENST00000372276 RPS6KA6Q9UK32 745 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms