RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 SOX13Q9UN79 622 aa16.56■□□□□ 0.24
GPHN-211ENST00000556020 PLCL2Q9UPR0 1127 aa16.56■□□□□ 0.24
GPHN-211ENST00000556020 NFS1Q9Y697 457 aa16.56■□□□□ 0.24
GPHN-211ENST00000556020 AP1M2Q9Y6Q5 423 aa16.56■□□□□ 0.24
GPHN-211ENST00000556020 MED13Q9UHV7 2174 aa16.55■□□□□ 0.24
GPHN-211ENST00000556020 ZSCAN9O15535 394 aaPredicted RBP16.55■□□□□ 0.24
GPHN-211ENST00000556020 TMEM63AO94886 807 aa16.55■□□□□ 0.24
GPHN-211ENST00000556020 SLCO2B1O94956 709 aa16.55■□□□□ 0.24
GPHN-211ENST00000556020 ARNTP27540 789 aa16.55■□□□□ 0.24
GPHN-211ENST00000556020 OTX2P32243 289 aa16.55■□□□□ 0.24
GPHN-211ENST00000556020 PGDP52209 483 aa16.55■□□□□ 0.24
GPHN-211ENST00000556020 SARNPP82979 210 aaKnown RBP16.55■□□□□ 0.24
GPHN-211ENST00000556020 KCNJ11Q14654 390 aa16.55■□□□□ 0.24
GPHN-211ENST00000556020 CTSL3PQ5NE16 218 aa16.55■□□□□ 0.24
GPHN-211ENST00000556020 ANKRD22Q5VYY1 191 aa16.55■□□□□ 0.24
GPHN-211ENST00000556020 ZNF385CQ66K41 422 aaPredicted RBP16.55■□□□□ 0.24
GPHN-211ENST00000556020 MRNIPQ6NTE8 343 aa16.55■□□□□ 0.24
GPHN-211ENST00000556020 TTC27Q6P3X3 843 aa16.55■□□□□ 0.24
GPHN-211ENST00000556020 LRRC6Q86X45 466 aa16.55■□□□□ 0.24
GPHN-211ENST00000556020 DNAJC22Q8N4W6 341 aa16.55■□□□□ 0.24
GPHN-211ENST00000556020 OR2L8Q8NGY9 312 aa16.55■□□□□ 0.24
GPHN-211ENST00000556020 MAGOHBQ96A72 148 aaKnown RBP16.55■□□□□ 0.24
GPHN-211ENST00000556020 DPH2Q9BQC3 489 aaPredicted RBP16.55■□□□□ 0.24
GPHN-211ENST00000556020 TRIM56Q9BRZ2 755 aaKnown RBP16.55■□□□□ 0.24
GPHN-211ENST00000556020 MENTQ9BUN1 341 aa16.55■□□□□ 0.24
GPHN-211ENST00000556020 MRM3Q9HC36 420 aaKnown RBP16.55■□□□□ 0.24
GPHN-211ENST00000556020 TXLNGQ9NUQ3 528 aa16.55■□□□□ 0.24
GPHN-211ENST00000556020 IL1RAPL1Q9NZN1 696 aa16.55■□□□□ 0.24
GPHN-211ENST00000556020 PADI2Q9Y2J8 665 aa16.55■□□□□ 0.24
GPHN-211ENST00000556020 CRYL1Q9Y2S2 319 aa16.55■□□□□ 0.24
GPHN-211ENST00000556020 SEC16AO15027 2179 aa16.54■□□□□ 0.24
GPHN-211ENST00000556020 A6NL46 340 aa16.54■□□□□ 0.24
GPHN-211ENST00000556020 GOLGA8MH3BSY2 632 aa16.54■□□□□ 0.24
GPHN-211ENST00000556020 RASGRF2O14827 1237 aa16.54■□□□□ 0.24
GPHN-211ENST00000556020 KPNA5O15131 536 aa16.54■□□□□ 0.24
GPHN-211ENST00000556020 NIPSNAP2O75323 286 aa16.54■□□□□ 0.24
GPHN-211ENST00000556020 RPS3P23396 243 aaKnown RBP eCLIP16.54■□□□□ 0.24
GPHN-211ENST00000556020 GRIA3P42263 894 aa16.54■□□□□ 0.24
GPHN-211ENST00000556020 MLLT10P55197 1068 aa16.54■□□□□ 0.24
GPHN-211ENST00000556020 CDK16Q00536 496 aa16.54■□□□□ 0.24
GPHN-211ENST00000556020 ATP1A4Q13733 1029 aa16.54■□□□□ 0.24
GPHN-211ENST00000556020 SF1Q15637 639 aaKnown RBP16.54■□□□□ 0.24
GPHN-211ENST00000556020 CCSMST1Q4G0I0 132 aa16.54■□□□□ 0.24
GPHN-211ENST00000556020 RHBDD2Q6NTF9 364 aa16.54■□□□□ 0.24
GPHN-211ENST00000556020 NDC1Q9BTX1 674 aa16.54■□□□□ 0.24
GPHN-211ENST00000556020 EURLQ9NYK6 297 aa16.54■□□□□ 0.24
GPHN-211ENST00000556020 SAMD15Q9P1V8 674 aa16.54■□□□□ 0.24
GPHN-211ENST00000556020 NDOR1Q9UHB4 597 aa16.54■□□□□ 0.24
GPHN-211ENST00000556020 PLAAQ9Y263 795 aa16.54■□□□□ 0.24
GPHN-211ENST00000556020 PTRH2Q9Y3E5 179 aaKnown RBP16.54■□□□□ 0.24
GPHN-211ENST00000556020 PCSK5Q92824 1860 aa16.53■□□□□ 0.24
GPHN-211ENST00000556020 H3BMH7 237 aa16.53■□□□□ 0.24
GPHN-211ENST00000556020 PFDN6O15212 129 aa16.53■□□□□ 0.24
GPHN-211ENST00000556020 ZNF185O15231 689 aa16.53■□□□□ 0.24
GPHN-211ENST00000556020 S1PR4O95977 384 aa16.53■□□□□ 0.24
GPHN-211ENST00000556020 F7P08709 466 aaPredicted RBP16.53■□□□□ 0.24
GPHN-211ENST00000556020 ALAS2P22557 587 aa16.53■□□□□ 0.24
GPHN-211ENST00000556020 PSMB5P28074 263 aa16.53■□□□□ 0.24
GPHN-211ENST00000556020 FOXL2P58012 376 aa16.53■□□□□ 0.24
GPHN-211ENST00000556020 DCDP81605 110 aaKnown RBP16.53■□□□□ 0.24
GPHN-211ENST00000556020 FOXK1P85037 733 aa16.53■□□□□ 0.24
GPHN-211ENST00000556020 RNF187Q5TA31 235 aaPredicted RBP16.53■□□□□ 0.24
GPHN-211ENST00000556020 TLDC1Q6P9B6 456 aa16.53■□□□□ 0.24
GPHN-211ENST00000556020 RAB43Q86YS6 212 aa16.53■□□□□ 0.24
GPHN-211ENST00000556020 ZBTB2Q8N680 514 aa16.53■□□□□ 0.24
GPHN-211ENST00000556020 LPGAT1Q92604 370 aa16.53■□□□□ 0.24
GPHN-211ENST00000556020 RAD51AP1Q96B01 352 aa16.53■□□□□ 0.24
GPHN-211ENST00000556020 SLC22A18Q96BI1 424 aa16.53■□□□□ 0.24
GPHN-211ENST00000556020 ZNF669Q96BR6 464 aaPredicted RBP16.53■□□□□ 0.24
GPHN-211ENST00000556020 FOPNLQ96NB1 174 aa16.53■□□□□ 0.24
GPHN-211ENST00000556020 BIRC8Q96P09 236 aa16.53■□□□□ 0.24
GPHN-211ENST00000556020 GBP5Q96PP8 586 aa16.53■□□□□ 0.24
GPHN-211ENST00000556020 CHRNA10Q9GZZ6 450 aa16.53■□□□□ 0.24
GPHN-211ENST00000556020 INTS7Q9NVH2 962 aaKnown RBP16.53■□□□□ 0.24
GPHN-211ENST00000556020 IFT80Q9P2H3 777 aaPredicted RBP16.53■□□□□ 0.24
GPHN-211ENST00000556020 SRPK3Q9UPE1 567 aa16.53■□□□□ 0.24
GPHN-211ENST00000556020 FLNCQ14315 2725 aa16.52■□□□□ 0.24
GPHN-211ENST00000556020 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.52■□□□□ 0.24
GPHN-211ENST00000556020 C1orf105O95561 183 aa16.52■□□□□ 0.24
GPHN-211ENST00000556020 PAMP19021 973 aa16.52■□□□□ 0.24
GPHN-211ENST00000556020 CHRM3P20309 590 aa16.52■□□□□ 0.24
GPHN-211ENST00000556020 FOLR3P41439 243 aa16.52■□□□□ 0.24
GPHN-211ENST00000556020 RAPSNQ13702 412 aa16.52■□□□□ 0.24
GPHN-211ENST00000556020 TYSND1Q2T9J0 566 aa16.52■□□□□ 0.24
GPHN-211ENST00000556020 FCRL6Q6DN72 434 aa16.52■□□□□ 0.24
GPHN-211ENST00000556020 KIAA0930Q6ICG6 404 aaPredicted RBP16.52■□□□□ 0.24
GPHN-211ENST00000556020 FIGLAQ6QHK4 219 aa16.52■□□□□ 0.24
GPHN-211ENST00000556020 TTLL10Q6ZVT0 673 aa16.52■□□□□ 0.24
GPHN-211ENST00000556020 CAND1Q86VP6 1230 aaKnown RBP16.52■□□□□ 0.24
GPHN-211ENST00000556020 MCATQ8IVS2 390 aaKnown RBP16.52■□□□□ 0.24
GPHN-211ENST00000556020 RAB42Q8N4Z0 105 aa16.52■□□□□ 0.24
GPHN-211ENST00000556020 PROKR1Q8TCW9 393 aa16.52■□□□□ 0.24
GPHN-211ENST00000556020 PBKQ96KB5 322 aa16.52■□□□□ 0.24
GPHN-211ENST00000556020 C17orf62Q9BQA9 187 aa16.52■□□□□ 0.24
GPHN-211ENST00000556020 DHRS4Q9BTZ2 278 aa16.52■□□□□ 0.24
GPHN-211ENST00000556020 RAB11FIP5Q9BXF6 653 aa16.52■□□□□ 0.24
GPHN-211ENST00000556020 JRKLQ9Y4A0 524 aa16.52■□□□□ 0.24
GPHN-211ENST00000556020 NBASA2RRP1 2371 aa16.51■□□□□ 0.23
GPHN-211ENST00000556020 E5RI56 91 aa16.51■□□□□ 0.23
GPHN-211ENST00000556020 KLF7O75840 302 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms