RNA–Protein interactions for RNA: ENST00000532872.5

RPS3-218, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-218ENST00000532872 TRIM58Q8NG06 486 aa12.34□□□□□ -0.43
RPS3-218ENST00000532872 GSDMBQ8TAX9 411 aa12.34□□□□□ -0.43
RPS3-218ENST00000532872 NDC1Q9BTX1 674 aa12.34□□□□□ -0.43
RPS3-218ENST00000532872 RAB11FIP5Q9BXF6 653 aa12.34□□□□□ -0.43
RPS3-218ENST00000532872 P2RY12Q9H244 342 aa12.34□□□□□ -0.43
RPS3-218ENST00000532872 IFT80Q9P2H3 777 aaPredicted RBP12.34□□□□□ -0.43
RPS3-218ENST00000532872 DHCR7Q9UBM7 475 aaKnown RBP12.34□□□□□ -0.43
RPS3-218ENST00000532872 NDOR1Q9UHB4 597 aa12.34□□□□□ -0.43
RPS3-218ENST00000532872 GPN3Q9UHW5 284 aaPredicted RBP12.34□□□□□ -0.43
RPS3-218ENST00000532872 SLC39A10Q9ULF5 831 aa12.34□□□□□ -0.43
RPS3-218ENST00000532872 MRFAP1Q9Y605 127 aa12.34□□□□□ -0.43
RPS3-218ENST00000532872 CLEC18AA5D8T8 446 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 RASGRF2O14827 1237 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 ZNF185O15231 689 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 DPM1O60762 260 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 NDUFS3O75489 264 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 CTSBP07858 339 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 RPS3P23396 243 aaKnown RBP eCLIP12.33□□□□□ -0.447e-13■■□□□ 13.6
RPS3-218ENST00000532872 NMBRP28336 390 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 OTX2P32243 289 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 FOLR3P41439 243 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 CDK16Q00536 496 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 GRB7Q14451 532 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 NADK2Q4G0N4 442 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 NKAIN1Q4KMZ8 207 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 TTC23LQ6PF05 361 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 CLEC18BQ6UXF7 455 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 OTOAQ7RTW8 1153 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 MRGPREQ86SM8 312 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 FAM20CQ8IXL6 584 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 FAM26EQ8N5C1 309 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 EFCAB3Q8N7B9 438 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 CLEC18CQ8NCF0 446 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 OR2L8Q8NGY9 312 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 CPT1CQ8TCG5 803 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 DENND1AQ8TEH3 1009 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 DLG3Q92796 817 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 IL17FQ96PD4 163 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 KIFC1Q9BW19 673 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 NUDT9Q9BW91 350 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 MRM3Q9HC36 420 aaKnown RBP12.33□□□□□ -0.44
RPS3-218ENST00000532872 HOMER3Q9NSC5 361 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 INTS7Q9NVH2 962 aaKnown RBP12.33□□□□□ -0.44
RPS3-218ENST00000532872 EURLQ9NYK6 297 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 GPR83Q9NYM4 423 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.33□□□□□ -0.44
RPS3-218ENST00000532872 ANKMY1Q9P2S6 941 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 CIDEBQ9UHD4 219 aa12.33□□□□□ -0.44
RPS3-218ENST00000532872 PTRH2Q9Y3E5 179 aaKnown RBP12.33□□□□□ -0.44
RPS3-218ENST00000532872 MAST4O15021 2626 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 A6NL46 340 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 VPS4BO75351 444 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 SORBS2O94875 1100 aaKnown RBP12.32□□□□□ -0.44
RPS3-218ENST00000532872 FKBP9O95302 570 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 IGHEP01854 428 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 TPSB2P20231 275 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 MGAT1P26572 445 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 ARNTP27540 789 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 KCNJ1P48048 391 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 ARSFP54793 590 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 EIF3BP55884 814 aaKnown RBP12.32□□□□□ -0.44
RPS3-218ENST00000532872 TPSAB1Q15661 275 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 ZC3H12BQ5HYM0 836 aaKnown RBP12.32□□□□□ -0.44
RPS3-218ENST00000532872 MRNIPQ6NTE8 343 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 MRPL14Q6P1L8 145 aaKnown RBP12.32□□□□□ -0.44
RPS3-218ENST00000532872 LRRC8BQ6P9F7 803 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 SDCCAG8Q86SQ7 713 aaPredicted RBP12.32□□□□□ -0.44
RPS3-218ENST00000532872 TAX1BP1Q86VP1 789 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 C2orf73Q8N5S3 287 aaPredicted RBP12.32□□□□□ -0.44
RPS3-218ENST00000532872 OTUD6BQ8N6M0 293 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 OR2Y1Q8NGV0 311 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 SKA2Q8WVK7 121 aaPredicted RBP12.32□□□□□ -0.44
RPS3-218ENST00000532872 RAD51AP1Q96B01 352 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 MFSD3Q96ES6 412 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 FER1L6-AS2Q96M78 137 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 SMAD5Q99717 465 aaKnown RBP12.32□□□□□ -0.44
RPS3-218ENST00000532872 SYBUQ9NX95 663 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 VPS4AQ9UN37 437 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 KLHL20Q9Y2M5 609 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 CCDC88CQ9P219 2028 aa12.32□□□□□ -0.44
RPS3-218ENST00000532872 ANKRD12Q6UB98 2062 aa12.31□□□□□ -0.44
RPS3-218ENST00000532872 NAV2Q8IVL1 2488 aa12.31□□□□□ -0.44
RPS3-218ENST00000532872 A0A1B0GX78 115 aa12.31□□□□□ -0.44
RPS3-218ENST00000532872 CYSRT1A8MQ03 144 aa12.31□□□□□ -0.44
RPS3-218ENST00000532872 PEX12O00623 359 aa12.31□□□□□ -0.44
RPS3-218ENST00000532872 PFDN6O15212 129 aa12.31□□□□□ -0.44
RPS3-218ENST00000532872 CEP104O60308 925 aa12.31□□□□□ -0.44
RPS3-218ENST00000532872 VAPBO95292 243 aa12.31□□□□□ -0.44
RPS3-218ENST00000532872 C1orf105O95561 183 aa12.31□□□□□ -0.44
RPS3-218ENST00000532872 ATXN8OSP0DMR3 200 aa12.31□□□□□ -0.44
RPS3-218ENST00000532872 ALAS2P22557 587 aa12.31□□□□□ -0.44
RPS3-218ENST00000532872 CCNFP41002 786 aa12.31□□□□□ -0.44
RPS3-218ENST00000532872 GCGRP47871 477 aa12.31□□□□□ -0.44
RPS3-218ENST00000532872 SRSF1Q07955 248 aaKnown RBP eCLIP12.31□□□□□ -0.44
RPS3-218ENST00000532872 SLC9A5Q14940 896 aa12.31□□□□□ -0.44
RPS3-218ENST00000532872 SF1Q15637 639 aaKnown RBP12.31□□□□□ -0.44
RPS3-218ENST00000532872 TYSND1Q2T9J0 566 aa12.31□□□□□ -0.44
RPS3-218ENST00000532872 CTSL3PQ5NE16 218 aa12.31□□□□□ -0.44
RPS3-218ENST00000532872 RNF187Q5TA31 235 aaPredicted RBP12.31□□□□□ -0.44
RPS3-218ENST00000532872 VWA5B1Q5TIE3 1220 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms