RNA–Protein interactions for RNA: ENST00000530820.5

CAPRIN1-209, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-209ENST00000530820 SPTLC3Q9NUV7 552 aa10.42□□□□□ -0.74
CAPRIN1-209ENST00000530820 KIF1CO43896 1103 aaKnown RBP10.41□□□□□ -0.74
CAPRIN1-209ENST00000530820 LIG1P18858 919 aa10.41□□□□□ -0.74
CAPRIN1-209ENST00000530820 OTUD6BQ8N6M0 293 aa10.41□□□□□ -0.74
CAPRIN1-209ENST00000530820 KAT2BQ92831 832 aa10.41□□□□□ -0.74
CAPRIN1-209ENST00000530820 SYAP1Q96A49 352 aaPredicted RBP10.41□□□□□ -0.74
CAPRIN1-209ENST00000530820 CEP164Q9UPV0 1460 aa10.41□□□□□ -0.74
CAPRIN1-209ENST00000530820 ROCK2O75116 1388 aaKnown RBP10.41□□□□□ -0.74
CAPRIN1-209ENST00000530820 ERLIN2O94905 339 aa10.41□□□□□ -0.74
CAPRIN1-209ENST00000530820 IPO7O95373 1038 aaKnown RBP10.41□□□□□ -0.74
CAPRIN1-209ENST00000530820 SLU7O95391 586 aaKnown RBP10.41□□□□□ -0.74
CAPRIN1-209ENST00000530820 INHBEP58166 350 aa10.41□□□□□ -0.74
CAPRIN1-209ENST00000530820 CCDC30Q5VVM6 783 aa10.41□□□□□ -0.74
CAPRIN1-209ENST00000530820 CNPY2Q9Y2B0 182 aa10.41□□□□□ -0.74
CAPRIN1-209ENST00000530820 CACTINQ8WUQ7 758 aaKnown RBP10.41□□□□□ -0.74
CAPRIN1-209ENST00000530820 SUGCTQ9HAC7 445 aa10.41□□□□□ -0.74
CAPRIN1-209ENST00000530820 SAMM50Q9Y512 469 aa10.41□□□□□ -0.74
CAPRIN1-209ENST00000530820 MAP3K1Q13233 1512 aa10.4□□□□□ -0.74
CAPRIN1-209ENST00000530820 PES1O00541 588 aaKnown RBP10.4□□□□□ -0.74
CAPRIN1-209ENST00000530820 ZRSR1Q15695 479 aaKnown RBP10.4□□□□□ -0.74
CAPRIN1-209ENST00000530820 INF2Q27J81 1249 aa10.4□□□□□ -0.74
CAPRIN1-209ENST00000530820 MYSM1Q5VVJ2 828 aa10.4□□□□□ -0.74
CAPRIN1-209ENST00000530820 WDR63Q8IWG1 891 aa10.4□□□□□ -0.74
CAPRIN1-209ENST00000530820 SCLT1Q96NL6 688 aa10.4□□□□□ -0.74
CAPRIN1-209ENST00000530820 FMNL2Q96PY5 1086 aa10.4□□□□□ -0.74
CAPRIN1-209ENST00000530820 ZDHHC9Q9Y397 364 aa10.4□□□□□ -0.74
CAPRIN1-209ENST00000530820 USP16Q9Y5T5 823 aa10.4□□□□□ -0.74
CAPRIN1-209ENST00000530820 MYL6BP14649 208 aa10.4□□□□□ -0.74
CAPRIN1-209ENST00000530820 CCDC181Q5TID7 509 aa10.4□□□□□ -0.74
CAPRIN1-209ENST00000530820 KIAA0825Q8IV33 1275 aa10.4□□□□□ -0.74
CAPRIN1-209ENST00000530820 CEP120Q8N960 986 aa10.4□□□□□ -0.74
CAPRIN1-209ENST00000530820 BICC1Q9H694 974 aaKnown RBP10.4□□□□□ -0.74
CAPRIN1-209ENST00000530820 MYO1FO00160 1098 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 SASH3O75995 380 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 HNRNPH1P31943 449 aaKnown RBP10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 ACTN2P35609 894 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 MTRQ99707 1265 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 CENPOQ9BU64 300 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 VEZTQ9HBM0 779 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 PLEKHH1Q9ULM0 1364 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 FAM160A1Q05DH4 1040 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 UPF3BQ9BZI7 483 aaKnown RBP10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 TRIM6Q9C030 488 aaPredicted RBP10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 FAM107BQ9H098 131 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 GOLGA6L4A6NEF3 574 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 MYBL2P10244 700 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 NEK4P51957 841 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 LRRC31Q6UY01 552 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 GOLGA5Q8TBA6 731 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 MIEF2Q96C03 454 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 KIF1BPQ96EK5 621 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 CARD6Q9BX69 1037 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 KDM4CQ9H3R0 1056 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 PDE11AQ9HCR9 933 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 CLIP2Q9UDT6 1046 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 DNAI1Q9UI46 699 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 DISP3Q9P2K9 1392 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 NLRP1Q9C000 1473 aa10.39□□□□□ -0.75
CAPRIN1-209ENST00000530820 RAPGEF2Q9Y4G8 1499 aa10.38□□□□□ -0.75
CAPRIN1-209ENST00000530820 DDX54Q8TDD1 881 aaKnown RBP10.38□□□□□ -0.75
CAPRIN1-209ENST00000530820 RBM28Q9NW13 759 aaKnown RBP10.38□□□□□ -0.75
CAPRIN1-209ENST00000530820 CAPN7Q9Y6W3 813 aa10.38□□□□□ -0.75
CAPRIN1-209ENST00000530820 DHX29Q7Z478 1369 aaKnown RBP10.38□□□□□ -0.75
CAPRIN1-209ENST00000530820 DDIT3P35638 169 aa10.38□□□□□ -0.75
CAPRIN1-209ENST00000530820 THEMIS2Q5TEJ8 643 aa10.38□□□□□ -0.75
CAPRIN1-209ENST00000530820 NBPF10Q6P3W6 841 aaKnown RBP10.38□□□□□ -0.75
CAPRIN1-209ENST00000530820 MYLK4Q86YV6 388 aaPredicted RBP10.38□□□□□ -0.75
CAPRIN1-209ENST00000530820 JMYQ8N9B5 988 aa10.38□□□□□ -0.75
CAPRIN1-209ENST00000530820 YIPF3Q9GZM5 350 aa10.38□□□□□ -0.75
CAPRIN1-209ENST00000530820 ODF2LQ9ULJ1 636 aa10.38□□□□□ -0.75
CAPRIN1-209ENST00000530820 ZNF232Q9UNY5 417 aa10.38□□□□□ -0.75
CAPRIN1-209ENST00000530820 FAN1Q9Y2M0 1017 aa10.38□□□□□ -0.75
CAPRIN1-209ENST00000530820 FCHSD2O94868 740 aa10.38□□□□□ -0.75
CAPRIN1-209ENST00000530820 SKILP12757 684 aa10.38□□□□□ -0.75
CAPRIN1-209ENST00000530820 ERCC4Q92889 916 aaPredicted RBP10.38□□□□□ -0.75
CAPRIN1-209ENST00000530820 CGNL1Q0VF96 1302 aa10.37□□□□□ -0.75
CAPRIN1-209ENST00000530820 CCT5P48643 541 aa10.37□□□□□ -0.75
CAPRIN1-209ENST00000530820 SCNN1BP51168 640 aa10.37□□□□□ -0.75
CAPRIN1-209ENST00000530820 SCRN1Q12765 414 aa10.37□□□□□ -0.75
CAPRIN1-209ENST00000530820 UVSSAQ2YD98 709 aa10.37□□□□□ -0.75
CAPRIN1-209ENST00000530820 CCDC144BQ3MJ40 725 aa10.37□□□□□ -0.75
CAPRIN1-209ENST00000530820 TBC1D9Q6ZT07 1266 aa10.37□□□□□ -0.75
CAPRIN1-209ENST00000530820 CCDC144CPQ8IYA2 1237 aa10.37□□□□□ -0.75
CAPRIN1-209ENST00000530820 RPUSD2Q8IZ73 545 aaKnown RBP10.37□□□□□ -0.75
CAPRIN1-209ENST00000530820 ARGLU1Q9NWB6 273 aaPredicted RBP10.37□□□□□ -0.75
CAPRIN1-209ENST00000530820 H3BQF6 201 aa10.37□□□□□ -0.75
CAPRIN1-209ENST00000530820 ELF1P32519 619 aa10.37□□□□□ -0.75
CAPRIN1-209ENST00000530820 FAM173BQ6P4H8 233 aa10.37□□□□□ -0.75
CAPRIN1-209ENST00000530820 FERMT3Q86UX7 667 aa10.37□□□□□ -0.75
CAPRIN1-209ENST00000530820 CAVIN2O95810 425 aa10.37□□□□□ -0.75
CAPRIN1-209ENST00000530820 TBC1D8BQ0IIM8 1120 aa10.37□□□□□ -0.75
CAPRIN1-209ENST00000530820 REXO1L1PQ8IX06 675 aa10.37□□□□□ -0.75
CAPRIN1-209ENST00000530820 EHD4Q9H223 541 aa10.37□□□□□ -0.75
CAPRIN1-209ENST00000530820 PTPRCP08575 1304 aa10.36□□□□□ -0.75
CAPRIN1-209ENST00000530820 OATP04181 439 aa10.36□□□□□ -0.75
CAPRIN1-209ENST00000530820 ZSCAN25Q6NSZ9 544 aa10.36□□□□□ -0.75
CAPRIN1-209ENST00000530820 CASC1Q6TDU7 716 aa10.36□□□□□ -0.75
CAPRIN1-209ENST00000530820 TADA2BQ86TJ2 420 aa10.36□□□□□ -0.75
CAPRIN1-209ENST00000530820 SPDL1Q96EA4 605 aa10.36□□□□□ -0.75
CAPRIN1-209ENST00000530820 FAXDC2Q96IV6 333 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms