RNA–Protein interactions for RNA: ENST00000518585.1

CTNNA1-209, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-209ENST00000518585 EPS8L1Q8TE68 723 aa6.96□□□□□ -1.3
CTNNA1-209ENST00000518585 KLRG1Q96E93 195 aa6.96□□□□□ -1.3
CTNNA1-209ENST00000518585 GRIP2Q9C0E4 1043 aa6.96□□□□□ -1.3
CTNNA1-209ENST00000518585 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-209ENST00000518585 CLN3Q13286 438 aa6.95□□□□□ -1.3
CTNNA1-209ENST00000518585 SKIV2LQ15477 1246 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-209ENST00000518585 KRTAP9-2Q9BYQ4 174 aa6.95□□□□□ -1.3
CTNNA1-209ENST00000518585 WIZO95785 1651 aa6.94□□□□□ -1.3
CTNNA1-209ENST00000518585 C1QTNF9BB2RNN3 333 aa6.94□□□□□ -1.3
CTNNA1-209ENST00000518585 GNB5O14775 395 aa6.94□□□□□ -1.3
CTNNA1-209ENST00000518585 ERVK-9P63128 1117 aa6.94□□□□□ -1.3
CTNNA1-209ENST00000518585 ESF1Q9H501 851 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-209ENST00000518585 GPAMQ9HCL2 828 aa6.94□□□□□ -1.3
CTNNA1-209ENST00000518585 NOP53Q9NZM5 478 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-209ENST00000518585 PCDHB9Q9Y5E1 797 aa6.94□□□□□ -1.3
CTNNA1-209ENST00000518585 TTBK1Q5TCY1 1321 aaPredicted RBP6.94□□□□□ -1.3
CTNNA1-209ENST00000518585 CADPSQ9ULU8 1353 aa6.94□□□□□ -1.3
CTNNA1-209ENST00000518585 GIGYF1O75420 1035 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-209ENST00000518585 RNF20Q5VTR2 975 aa6.93□□□□□ -1.3
CTNNA1-209ENST00000518585 C1orf229Q6ZS94 237 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-209ENST00000518585 SUV39H2Q9H5I1 410 aa6.93□□□□□ -1.3
CTNNA1-209ENST00000518585 USP17L8P0C7I0 530 aa6.92□□□□□ -1.3
CTNNA1-209ENST00000518585 CSB-PGBD3P0DP91 1061 aa6.92□□□□□ -1.3
CTNNA1-209ENST00000518585 BMP4P12644 408 aa6.92□□□□□ -1.3
CTNNA1-209ENST00000518585 LBRQ14739 615 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-209ENST00000518585 SLCO4C1Q6ZQN7 724 aa6.92□□□□□ -1.3
CTNNA1-209ENST00000518585 PGBD3Q8N328 593 aa6.92□□□□□ -1.3
CTNNA1-209ENST00000518585 ARHGEF10LQ9HCE6 1279 aa6.92□□□□□ -1.3
CTNNA1-209ENST00000518585 HMX1Q9NP08 348 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-209ENST00000518585 KRTAP9-6A0A140TA67 174 aa6.91□□□□□ -1.3
CTNNA1-209ENST00000518585 A0A1B0GTH6 734 aa6.91□□□□□ -1.3
CTNNA1-209ENST00000518585 GTF2E1P29083 439 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-209ENST00000518585 SH3D19Q5HYK7 790 aa6.91□□□□□ -1.3
CTNNA1-209ENST00000518585 ZMYM1Q5SVZ6 1142 aa6.91□□□□□ -1.3
CTNNA1-209ENST00000518585 CD163Q86VB7 1156 aa6.91□□□□□ -1.3
CTNNA1-209ENST00000518585 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.91□□□□□ -1.3
CTNNA1-209ENST00000518585 ATXN7L1Q9ULK2 861 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-209ENST00000518585 TOP2AP11388 1531 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-209ENST00000518585 ZBBXA8MT70 800 aa6.9□□□□□ -1.3
CTNNA1-209ENST00000518585 FBXO31Q5XUX0 539 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-209ENST00000518585 LINC00114Q6XXX2 140 aa6.9□□□□□ -1.3
CTNNA1-209ENST00000518585 SEMA6BQ9H3T3 888 aa6.9□□□□□ -1.3
CTNNA1-209ENST00000518585 PDS5BQ9NTI5 1447 aa6.9□□□□□ -1.31
CTNNA1-209ENST00000518585 CUX2O14529 1486 aa6.9□□□□□ -1.31
CTNNA1-209ENST00000518585 CHRNA4P43681 627 aa6.89□□□□□ -1.31
CTNNA1-209ENST00000518585 EFHC2Q5JST6 749 aa6.89□□□□□ -1.31
CTNNA1-209ENST00000518585 PROCA1Q8NCQ7 364 aaPredicted RBP6.89□□□□□ -1.31
CTNNA1-209ENST00000518585 SLC24A3Q9HC58 644 aa6.89□□□□□ -1.31
CTNNA1-209ENST00000518585 GGA1Q9UJY5 639 aa6.89□□□□□ -1.31
CTNNA1-209ENST00000518585 LAMC3Q9Y6N6 1575 aa6.89□□□□□ -1.31
CTNNA1-209ENST00000518585 THBS1P07996 1170 aa6.88□□□□□ -1.31
CTNNA1-209ENST00000518585 PHKA2P46019 1235 aa6.88□□□□□ -1.31
CTNNA1-209ENST00000518585 ZNF592Q92610 1267 aa6.88□□□□□ -1.31
CTNNA1-209ENST00000518585 SCO2A0A1W2PP80 73 aa6.87□□□□□ -1.31
CTNNA1-209ENST00000518585 HOXB4P17483 251 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-209ENST00000518585 FGFR3P22607 806 aa6.87□□□□□ -1.31
CTNNA1-209ENST00000518585 DOC2BQ14184 412 aa6.87□□□□□ -1.31
CTNNA1-209ENST00000518585 GNASQ5JWF2 1037 aa6.87□□□□□ -1.31
CTNNA1-209ENST00000518585 ZSCAN10Q96SZ4 725 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-209ENST00000518585 RUBCNLQ9H714 662 aa6.87□□□□□ -1.31
CTNNA1-209ENST00000518585 RAB6BQ9NRW1 208 aa6.87□□□□□ -1.31
CTNNA1-209ENST00000518585 PCDHB11Q9Y5F2 797 aa6.87□□□□□ -1.31
CTNNA1-209ENST00000518585 CFTRP13569 1480 aa6.86□□□□□ -1.31
CTNNA1-209ENST00000518585 TRAK2O60296 914 aa6.86□□□□□ -1.31
CTNNA1-209ENST00000518585 EPXP11678 715 aa6.86□□□□□ -1.31
CTNNA1-209ENST00000518585 SCTRP47872 440 aa6.86□□□□□ -1.31
CTNNA1-209ENST00000518585 DGKGP49619 791 aa6.86□□□□□ -1.31
CTNNA1-209ENST00000518585 MCCD1P59942 119 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-209ENST00000518585 TMEM214Q6NUQ4 689 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-209ENST00000518585 KRTAP1-3Q8IUG1 177 aa6.86□□□□□ -1.31
CTNNA1-209ENST00000518585 CNKSR1Q969H4 720 aa6.86□□□□□ -1.31
CTNNA1-209ENST00000518585 ABHD17AQ96GS6 310 aa6.86□□□□□ -1.31
CTNNA1-209ENST00000518585 BTBD6Q96KE9 485 aa6.86□□□□□ -1.31
CTNNA1-209ENST00000518585 ESYT1Q9BSJ8 1104 aa6.86□□□□□ -1.31
CTNNA1-209ENST00000518585 OSBPL3Q9H4L5 887 aa6.86□□□□□ -1.31
CTNNA1-209ENST00000518585 GNRH1P01148 92 aa6.85□□□□□ -1.31
CTNNA1-209ENST00000518585 ITGB7P26010 798 aa6.85□□□□□ -1.31
CTNNA1-209ENST00000518585 GATA4P43694 442 aa6.85□□□□□ -1.31
CTNNA1-209ENST00000518585 CENPCQ03188 943 aa6.85□□□□□ -1.31
CTNNA1-209ENST00000518585 RNF135Q8IUD6 432 aa6.85□□□□□ -1.31
CTNNA1-209ENST00000518585 DDRGK1Q96HY6 314 aa6.85□□□□□ -1.31
CTNNA1-209ENST00000518585 CCDC88BA6NC98 1476 aa6.85□□□□□ -1.31
CTNNA1-209ENST00000518585 NEURL1BA8MQ27 555 aa6.84□□□□□ -1.31
CTNNA1-209ENST00000518585 C2CD2LO14523 706 aa6.84□□□□□ -1.31
CTNNA1-209ENST00000518585 FBXO45P0C2W1 286 aa6.84□□□□□ -1.31
CTNNA1-209ENST00000518585 ARAFP10398 606 aa6.84□□□□□ -1.31
CTNNA1-209ENST00000518585 UBAP2LQ14157 1087 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-209ENST00000518585 FANCD2Q9BXW9 1451 aa6.84□□□□□ -1.31
CTNNA1-209ENST00000518585 THOC2Q8NI27 1593 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-209ENST00000518585 CTBSQ01459 385 aa6.83□□□□□ -1.32
CTNNA1-209ENST00000518585 ZNF330Q9Y3S2 320 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-209ENST00000518585 MRC2Q9UBG0 1479 aa6.83□□□□□ -1.32
CTNNA1-209ENST00000518585 CEP164Q9UPV0 1460 aa6.82□□□□□ -1.32
CTNNA1-209ENST00000518585 SUPT5HO00267 1087 aaKnown RBP6.82□□□□□ -1.32
CTNNA1-209ENST00000518585 BNIP3LO60238 219 aa6.82□□□□□ -1.32
CTNNA1-209ENST00000518585 MYCP01106 439 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-209ENST00000518585 IL2RAP01589 272 aa6.82□□□□□ -1.32
CTNNA1-209ENST00000518585 MSX1P28360 303 aa6.82□□□□□ -1.32
CTNNA1-209ENST00000518585 RFC5P40937 340 aa6.82□□□□□ -1.32
CTNNA1-209ENST00000518585 FIGNL1Q6PIW4 674 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms