RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 MTMR3Q13615 1198 aa8.67□□□□□ -1.02
HMGB1P3-201ENST00000502802 PPP1R18Q6NYC8 613 aa8.67□□□□□ -1.02
HMGB1P3-201ENST00000502802 ZNF784Q8NCA9 323 aaPredicted RBP8.67□□□□□ -1.02
HMGB1P3-201ENST00000502802 HELQQ8TDG4 1101 aa8.67□□□□□ -1.02
HMGB1P3-201ENST00000502802 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.67□□□□□ -1.02
HMGB1P3-201ENST00000502802 HCSTQ9UBK5 93 aa8.67□□□□□ -1.02
HMGB1P3-201ENST00000502802 STAU1O95793 577 aaKnown RBP8.66□□□□□ -1.02
HMGB1P3-201ENST00000502802 EPHA4P54764 986 aa8.66□□□□□ -1.02
HMGB1P3-201ENST00000502802 MYT1Q01538 1121 aa8.66□□□□□ -1.02
HMGB1P3-201ENST00000502802 ZNF326Q5BKZ1 582 aaKnown RBP8.66□□□□□ -1.02
HMGB1P3-201ENST00000502802 VTI1AQ96AJ9 217 aa8.66□□□□□ -1.02
HMGB1P3-201ENST00000502802 ASB16Q96NS5 453 aa8.66□□□□□ -1.02
HMGB1P3-201ENST00000502802 SLC4A9Q96Q91 983 aa8.66□□□□□ -1.02
HMGB1P3-201ENST00000502802 ETNK1Q9HBU6 452 aa8.66□□□□□ -1.02
HMGB1P3-201ENST00000502802 KIAA1522Q9P206 1035 aaPredicted RBP8.66□□□□□ -1.02
HMGB1P3-201ENST00000502802 SERTAD1Q9UHV2 236 aa8.66□□□□□ -1.02
HMGB1P3-201ENST00000502802 FAM13AO94988 1023 aa8.65□□□□□ -1.02
HMGB1P3-201ENST00000502802 GNRH1P01148 92 aa8.65□□□□□ -1.02
HMGB1P3-201ENST00000502802 NPR3P17342 541 aa8.65□□□□□ -1.02
HMGB1P3-201ENST00000502802 CYP2U1Q7Z449 544 aa8.65□□□□□ -1.02
HMGB1P3-201ENST00000502802 ZSCAN29Q8IWY8 852 aaPredicted RBP8.65□□□□□ -1.02
HMGB1P3-201ENST00000502802 CCDC116Q8IYX3 515 aa8.65□□□□□ -1.02
HMGB1P3-201ENST00000502802 TSPAN10Q9H1Z9 355 aaPredicted RBP8.65□□□□□ -1.02
HMGB1P3-201ENST00000502802 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.65□□□□□ -1.02
HMGB1P3-201ENST00000502802 TLL2Q9Y6L7 1015 aa8.65□□□□□ -1.02
HMGB1P3-201ENST00000502802 SIAH2O43255 324 aa8.64□□□□□ -1.03
HMGB1P3-201ENST00000502802 LILRA1O75019 489 aa8.64□□□□□ -1.03
HMGB1P3-201ENST00000502802 ADH1CP00326 375 aa8.64□□□□□ -1.03
HMGB1P3-201ENST00000502802 NR5A1Q13285 461 aa8.64□□□□□ -1.03
HMGB1P3-201ENST00000502802 ESCO1Q5FWF5 840 aa8.64□□□□□ -1.03
HMGB1P3-201ENST00000502802 PPP1R26Q5T8A7 1209 aaPredicted RBP8.64□□□□□ -1.03
HMGB1P3-201ENST00000502802 CHMP7Q8WUX9 453 aaPredicted RBP8.64□□□□□ -1.03
HMGB1P3-201ENST00000502802 IGSF5Q9NSI5 407 aa8.63□□□□□ -1.03
HMGB1P3-201ENST00000502802 PPP1R12BO60237 982 aaPredicted RBP8.62□□□□□ -1.03
HMGB1P3-201ENST00000502802 FBXO33Q7Z6M2 555 aa8.62□□□□□ -1.03
HMGB1P3-201ENST00000502802 STAG2Q8N3U4 1231 aa8.62□□□□□ -1.03
HMGB1P3-201ENST00000502802 A0A1W2PRU2 124 aa8.61□□□□□ -1.03
HMGB1P3-201ENST00000502802 A6NJY4 79 aa8.61□□□□□ -1.03
HMGB1P3-201ENST00000502802 ADD1P35611 737 aaKnown RBP8.61□□□□□ -1.03
HMGB1P3-201ENST00000502802 SMTNP53814 917 aa8.61□□□□□ -1.03
HMGB1P3-201ENST00000502802 FOXK2Q01167 660 aa8.61□□□□□ -1.03
HMGB1P3-201ENST00000502802 COL19A1Q14993 1142 aa8.61□□□□□ -1.03
HMGB1P3-201ENST00000502802 C16orf46Q6P387 395 aa8.61□□□□□ -1.03
HMGB1P3-201ENST00000502802 LIAT1Q6ZQX7 453 aa8.61□□□□□ -1.03
HMGB1P3-201ENST00000502802 RGL4Q8IZJ4 473 aa8.61□□□□□ -1.03
HMGB1P3-201ENST00000502802 PGPEP1Q9NXJ5 209 aa8.61□□□□□ -1.03
HMGB1P3-201ENST00000502802 SCHIP1Q9P0W5 487 aaPredicted RBP8.61□□□□□ -1.03
HMGB1P3-201ENST00000502802 MPSTP25325 297 aa8.6□□□□□ -1.03
HMGB1P3-201ENST00000502802 MTFR1Q15390 333 aa8.6□□□□□ -1.03
HMGB1P3-201ENST00000502802 POTEGQ6S5H5 508 aa8.6□□□□□ -1.03
HMGB1P3-201ENST00000502802 SLC9A9Q8IVB4 645 aa8.6□□□□□ -1.03
HMGB1P3-201ENST00000502802 C2orf49Q9BVC5 232 aaPredicted RBP8.6□□□□□ -1.03
HMGB1P3-201ENST00000502802 WNT7AO00755 349 aa8.59□□□□□ -1.03
HMGB1P3-201ENST00000502802 TBCELQ5QJ74 424 aa8.59□□□□□ -1.03
HMGB1P3-201ENST00000502802 XAGE2Q96GT9 111 aa8.59□□□□□ -1.03
HMGB1P3-201ENST00000502802 RBCK1Q9BYM8 510 aa8.59□□□□□ -1.03
HMGB1P3-201ENST00000502802 SAP130Q9H0E3 1048 aa8.59□□□□□ -1.03
HMGB1P3-201ENST00000502802 RAB6BQ9NRW1 208 aa8.59□□□□□ -1.03
HMGB1P3-201ENST00000502802 EMILIN1Q9Y6C2 1016 aa8.59□□□□□ -1.03
HMGB1P3-201ENST00000502802 IGSF3O75054 1194 aa8.58□□□□□ -1.04
HMGB1P3-201ENST00000502802 NR3C2P08235 984 aa8.58□□□□□ -1.04
HMGB1P3-201ENST00000502802 ARHGEF10LQ9HCE6 1279 aa8.58□□□□□ -1.04
HMGB1P3-201ENST00000502802 CHMP3Q9Y3E7 222 aa8.58□□□□□ -1.04
HMGB1P3-201ENST00000502802 CDK2AP1O14519 115 aa8.57□□□□□ -1.04
HMGB1P3-201ENST00000502802 NDUFB5O43674 189 aa8.57□□□□□ -1.04
HMGB1P3-201ENST00000502802 IL2RAP01589 272 aa8.57□□□□□ -1.04
HMGB1P3-201ENST00000502802 VAMP1P23763 118 aa8.57□□□□□ -1.04
HMGB1P3-201ENST00000502802 PSMA6P60900 246 aaKnown RBP8.57□□□□□ -1.04
HMGB1P3-201ENST00000502802 TAGLNQ01995 201 aaKnown RBP8.57□□□□□ -1.04
HMGB1P3-201ENST00000502802 EAPPQ56P03 285 aaPredicted RBP8.57□□□□□ -1.04
HMGB1P3-201ENST00000502802 COX20Q5RI15 118 aa8.57□□□□□ -1.04
HMGB1P3-201ENST00000502802 ALKBH2Q6NS38 261 aa8.57□□□□□ -1.04
HMGB1P3-201ENST00000502802 RNF166Q96A37 237 aaPredicted RBP8.57□□□□□ -1.04
HMGB1P3-201ENST00000502802 MRGPRX2Q96LB1 330 aa8.57□□□□□ -1.04
HMGB1P3-201ENST00000502802 BRPF3Q9ULD4 1205 aa8.57□□□□□ -1.04
HMGB1P3-201ENST00000502802 TMC7Q7Z402 723 aa8.56□□□□□ -1.04
HMGB1P3-201ENST00000502802 EMID1Q96A84 441 aaPredicted RBP8.56□□□□□ -1.04
HMGB1P3-201ENST00000502802 CITED4Q96RK1 184 aa8.56□□□□□ -1.04
HMGB1P3-201ENST00000502802 BCL11AQ9H165 835 aa8.56□□□□□ -1.04
HMGB1P3-201ENST00000502802 STIM2Q9P246 746 aa8.56□□□□□ -1.04
HMGB1P3-201ENST00000502802 EIF1AXP47813 144 aaKnown RBP8.55□□□□□ -1.04
HMGB1P3-201ENST00000502802 TLR1Q15399 786 aa8.55□□□□□ -1.04
HMGB1P3-201ENST00000502802 CNKSR1Q969H4 720 aa8.55□□□□□ -1.04
HMGB1P3-201ENST00000502802 ESYT1Q9BSJ8 1104 aa8.55□□□□□ -1.04
HMGB1P3-201ENST00000502802 TNFRSF10BO14763 440 aa8.54□□□□□ -1.04
HMGB1P3-201ENST00000502802 ADH1AP07327 375 aa8.54□□□□□ -1.04
HMGB1P3-201ENST00000502802 SLC19A1P41440 591 aa8.54□□□□□ -1.04
HMGB1P3-201ENST00000502802 AAMPQ13685 434 aa8.54□□□□□ -1.04
HMGB1P3-201ENST00000502802 POTEAQ6S8J7 498 aa8.54□□□□□ -1.04
HMGB1P3-201ENST00000502802 MYO19Q96H55 970 aa8.54□□□□□ -1.04
HMGB1P3-201ENST00000502802 QTRT2Q9H974 415 aaKnown RBP8.54□□□□□ -1.04
HMGB1P3-201ENST00000502802 IQSEC3Q9UPP2 1182 aaPredicted RBP8.54□□□□□ -1.04
HMGB1P3-201ENST00000502802 HRH3Q9Y5N1 445 aa8.54□□□□□ -1.04
HMGB1P3-201ENST00000502802 TCF3P15923 654 aa8.53□□□□□ -1.04
HMGB1P3-201ENST00000502802 NBPF15Q8N660 670 aa8.53□□□□□ -1.04
HMGB1P3-201ENST00000502802 ABTB2Q8N961 1025 aa8.53□□□□□ -1.04
HMGB1P3-201ENST00000502802 TMC1Q8TDI8 760 aa8.53□□□□□ -1.04
HMGB1P3-201ENST00000502802 LRFN2Q9ULH4 789 aa8.53□□□□□ -1.04
HMGB1P3-201ENST00000502802 USP3Q9Y6I4 520 aa8.53□□□□□ -1.04
HMGB1P3-201ENST00000502802 TREHO43280 583 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms