RNA–Protein interactions for RNA: ENST00000410720.1

RNU6-248P-201, Transcript of RNA, U6 small nuclear 248, pseudogene, humanhuman

BASIC

Gene RNU6-248P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-248P-201ENST00000410720 GMPRP36959 345 aa7.5□□□□□ -1.21
RNU6-248P-201ENST00000410720 NBPF10Q6P3W6 841 aaKnown RBP7.5□□□□□ -1.21
RNU6-248P-201ENST00000410720 TRIM50Q86XT4 487 aa7.5□□□□□ -1.21
RNU6-248P-201ENST00000410720 NBPF15Q8N660 670 aa7.5□□□□□ -1.21
RNU6-248P-201ENST00000410720 TIMMDC1Q9NPL8 285 aa7.5□□□□□ -1.21
RNU6-248P-201ENST00000410720 MKRN1Q9UHC7 482 aaKnown RBP7.5□□□□□ -1.21
RNU6-248P-201ENST00000410720 PCDHGA11Q9Y5H2 935 aa7.5□□□□□ -1.21
RNU6-248P-201ENST00000410720 PLEKHM2Q8IWE5 1019 aa7.49□□□□□ -1.21
RNU6-248P-201ENST00000410720 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.49□□□□□ -1.21
RNU6-248P-201ENST00000410720 ZNF594Q96JF6 807 aaPredicted RBP7.49□□□□□ -1.21
RNU6-248P-201ENST00000410720 PPP1R12CQ9BZL4 782 aa7.49□□□□□ -1.21
RNU6-248P-201ENST00000410720 TMEM229AB2RXF0 380 aa7.48□□□□□ -1.21
RNU6-248P-201ENST00000410720 LMOD1P29536 600 aaPredicted RBP7.48□□□□□ -1.21
RNU6-248P-201ENST00000410720 ATP1A2P50993 1020 aa7.48□□□□□ -1.21
RNU6-248P-201ENST00000410720 C14orf37Q86TY3 774 aa7.48□□□□□ -1.21
RNU6-248P-201ENST00000410720 VWA5B2Q8N398 1253 aa7.48□□□□□ -1.21
RNU6-248P-201ENST00000410720 TPCN2Q8NHX9 752 aa7.48□□□□□ -1.21
RNU6-248P-201ENST00000410720 FHDC1Q9C0D6 1143 aaPredicted RBP7.48□□□□□ -1.21
RNU6-248P-201ENST00000410720 DNAAF2Q9NVR5 837 aaKnown RBP7.48□□□□□ -1.21
RNU6-248P-201ENST00000410720 RBM19Q9Y4C8 960 aaKnown RBP7.48□□□□□ -1.21
RNU6-248P-201ENST00000410720 MAFBQ9Y5Q3 323 aaPredicted RBP7.48□□□□□ -1.21
RNU6-248P-201ENST00000410720 SPATA31C2B4DYI2 1134 aa7.47□□□□□ -1.21
RNU6-248P-201ENST00000410720 RASA1P20936 1047 aa7.47□□□□□ -1.21
RNU6-248P-201ENST00000410720 PLA2G4AP47712 749 aa7.47□□□□□ -1.21
RNU6-248P-201ENST00000410720 SMTNP53814 917 aa7.47□□□□□ -1.21
RNU6-248P-201ENST00000410720 CLDN10P78369 228 aa7.47□□□□□ -1.21
RNU6-248P-201ENST00000410720 OGFOD1Q8N543 542 aa7.47□□□□□ -1.21
RNU6-248P-201ENST00000410720 GPAMQ9HCL2 828 aa7.47□□□□□ -1.21
RNU6-248P-201ENST00000410720 ZNF358Q9NW07 568 aa7.47□□□□□ -1.21
RNU6-248P-201ENST00000410720 KIAA1024Q9UPX6 916 aa7.47□□□□□ -1.21
RNU6-248P-201ENST00000410720 HRH3Q9Y5N1 445 aa7.47□□□□□ -1.21
RNU6-248P-201ENST00000410720 BACH1O14867 736 aa7.46□□□□□ -1.22
RNU6-248P-201ENST00000410720 RFX1P22670 979 aa7.46□□□□□ -1.22
RNU6-248P-201ENST00000410720 INSM1Q01101 510 aaPredicted RBP7.46□□□□□ -1.22
RNU6-248P-201ENST00000410720 C4orf17Q53FE4 359 aa7.46□□□□□ -1.22
RNU6-248P-201ENST00000410720 CCDC102BQ68D86 513 aa7.46□□□□□ -1.22
RNU6-248P-201ENST00000410720 SV2AQ7L0J3 742 aa7.46□□□□□ -1.22
RNU6-248P-201ENST00000410720 RHBDD1Q8TEB9 315 aa7.46□□□□□ -1.22
RNU6-248P-201ENST00000410720 CUEDC1Q9NWM3 386 aaPredicted RBP7.46□□□□□ -1.22
RNU6-248P-201ENST00000410720 DYRK1BQ9Y463 629 aa7.46□□□□□ -1.22
RNU6-248P-201ENST00000410720 ARID3CA6NKF2 412 aa7.45□□□□□ -1.22
RNU6-248P-201ENST00000410720 PPARGC1BQ86YN6 1023 aaKnown RBP7.45□□□□□ -1.22
RNU6-248P-201ENST00000410720 AIDAQ96BJ3 306 aa7.45□□□□□ -1.22
RNU6-248P-201ENST00000410720 STK17AQ9UEE5 414 aa7.45□□□□□ -1.22
RNU6-248P-201ENST00000410720 A6NJY4 79 aa7.44□□□□□ -1.22
RNU6-248P-201ENST00000410720 CDCA8Q53HL2 280 aa7.44□□□□□ -1.22
RNU6-248P-201ENST00000410720 TBCELQ5QJ74 424 aa7.44□□□□□ -1.22
RNU6-248P-201ENST00000410720 LARP1Q6PKG0 1096 aaKnown RBP7.44□□□□□ -1.22
RNU6-248P-201ENST00000410720 GPR161Q8N6U8 529 aaKnown RBP7.44□□□□□ -1.22
RNU6-248P-201ENST00000410720 CABP1Q9NZU7 370 aa7.44□□□□□ -1.22
RNU6-248P-201ENST00000410720 SFI1A8K8P3 1242 aa7.43□□□□□ -1.22
RNU6-248P-201ENST00000410720 GPR25O00155 361 aa7.43□□□□□ -1.22
RNU6-248P-201ENST00000410720 F11P03951 625 aa7.43□□□□□ -1.22
RNU6-248P-201ENST00000410720 VSIG8P0DPA2 414 aa7.43□□□□□ -1.22
RNU6-248P-201ENST00000410720 TNS4Q8IZW8 715 aa7.43□□□□□ -1.22
RNU6-248P-201ENST00000410720 NIFKQ9BYG3 293 aaKnown RBP7.43□□□□□ -1.22
RNU6-248P-201ENST00000410720 VRTNQ9H8Y1 702 aa7.43□□□□□ -1.22
RNU6-248P-201ENST00000410720 PARP3Q9Y6F1 533 aa7.43□□□□□ -1.22
RNU6-248P-201ENST00000410720 USP3Q9Y6I4 520 aa7.43□□□□□ -1.22
RNU6-248P-201ENST00000410720 A0A1B0GTH6 734 aa7.42□□□□□ -1.22
RNU6-248P-201ENST00000410720 H7C1W4 665 aa7.42□□□□□ -1.22
RNU6-248P-201ENST00000410720 ZBTB7BO15156 539 aaPredicted RBP7.42□□□□□ -1.22
RNU6-248P-201ENST00000410720 CSB-PGBD3P0DP91 1061 aa7.42□□□□□ -1.22
RNU6-248P-201ENST00000410720 DBN1Q16643 649 aa7.42□□□□□ -1.22
RNU6-248P-201ENST00000410720 WDR44Q5JSH3 913 aa7.42□□□□□ -1.22
RNU6-248P-201ENST00000410720 TRIM22Q8IYM9 498 aa7.42□□□□□ -1.22
RNU6-248P-201ENST00000410720 PGBD3Q8N328 593 aa7.42□□□□□ -1.22
RNU6-248P-201ENST00000410720 LARGE2Q8N3Y3 721 aa7.42□□□□□ -1.22
RNU6-248P-201ENST00000410720 GTPBP3Q969Y2 492 aaKnown RBP7.42□□□□□ -1.22
RNU6-248P-201ENST00000410720 CNTNAP3BQ96NU0 1288 aa7.42□□□□□ -1.22
RNU6-248P-201ENST00000410720 SLC4A9Q96Q91 983 aa7.42□□□□□ -1.22
RNU6-248P-201ENST00000410720 COL25A1Q9BXS0 654 aaPredicted RBP7.42□□□□□ -1.22
RNU6-248P-201ENST00000410720 CNTNAP3Q9BZ76 1288 aa7.42□□□□□ -1.22
RNU6-248P-201ENST00000410720 RUBCNLQ9H714 662 aa7.42□□□□□ -1.22
RNU6-248P-201ENST00000410720 MSX1P28360 303 aa7.41□□□□□ -1.22
RNU6-248P-201ENST00000410720 CRTC2Q53ET0 693 aaPredicted RBP7.41□□□□□ -1.22
RNU6-248P-201ENST00000410720 CFAP70Q5T0N1 1121 aa7.41□□□□□ -1.22
RNU6-248P-201ENST00000410720 FOXR1Q6PIV2 292 aa7.41□□□□□ -1.22
RNU6-248P-201ENST00000410720 TSEN2Q8NCE0 465 aaKnown RBP7.41□□□□□ -1.22
RNU6-248P-201ENST00000410720 NANOS1Q8WY41 292 aaKnown RBP7.41□□□□□ -1.22
RNU6-248P-201ENST00000410720 ZNF837Q96EG3 531 aaPredicted RBP7.41□□□□□ -1.22
RNU6-248P-201ENST00000410720 NUCKS1Q9H1E3 243 aaKnown RBP7.41□□□□□ -1.22
RNU6-248P-201ENST00000410720 CDK2AP1O14519 115 aa7.4□□□□□ -1.22
RNU6-248P-201ENST00000410720 LGR5O75473 907 aa7.4□□□□□ -1.22
RNU6-248P-201ENST00000410720 LORP23490 312 aaPredicted RBP7.4□□□□□ -1.22
RNU6-248P-201ENST00000410720 MTFR1Q15390 333 aa7.4□□□□□ -1.22
RNU6-248P-201ENST00000410720 NBPF1Q3BBV0 1214 aa7.4□□□□□ -1.22
RNU6-248P-201ENST00000410720 KANK4Q5T7N3 995 aaPredicted RBP7.4□□□□□ -1.22
RNU6-248P-201ENST00000410720 SLC9A9Q8IVB4 645 aa7.4□□□□□ -1.22
RNU6-248P-201ENST00000410720 CCDC97Q96F63 343 aaPredicted RBP7.4□□□□□ -1.22
RNU6-248P-201ENST00000410720 ZNF232Q9UNY5 417 aa7.4□□□□□ -1.22
RNU6-248P-201ENST00000410720 USP17L15C9J2P7 530 aa7.39□□□□□ -1.23
RNU6-248P-201ENST00000410720 USP17L10C9JJH3 530 aa7.39□□□□□ -1.23
RNU6-248P-201ENST00000410720 USP17L13C9JLJ4 530 aa7.39□□□□□ -1.23
RNU6-248P-201ENST00000410720 USP17L12C9JPN9 530 aa7.39□□□□□ -1.23
RNU6-248P-201ENST00000410720 USP17L11C9JVI0 530 aa7.39□□□□□ -1.23
RNU6-248P-201ENST00000410720 USP17L21D6R901 530 aa7.39□□□□□ -1.23
RNU6-248P-201ENST00000410720 USP17L18D6R9N7 530 aa7.39□□□□□ -1.23
RNU6-248P-201ENST00000410720 USP17L22D6RA61 530 aa7.39□□□□□ -1.23
RNU6-248P-201ENST00000410720 USP17L17D6RBQ6 530 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms