Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 MIR1246-201ENST00000636535 73 ntBASIC-0.43□□□□□ -2.48
CCDC61Q9Y6R9 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.44□□□□□ -2.48
CCDC61Q9Y6R9 RNA5SP93-201ENST00000362525 114 ntBASIC-0.45□□□□□ -2.48
CCDC61Q9Y6R9 RNU6-1024P-201ENST00000384199 107 ntBASIC-0.46□□□□□ -2.48
CCDC61Q9Y6R9 RNU6-983P-201ENST00000516004 103 ntBASIC-0.47□□□□□ -2.48
CCDC61Q9Y6R9 RNY4P7-201ENST00000364600 96 ntBASIC-0.48□□□□□ -2.49
CCDC61Q9Y6R9 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.49□□□□□ -2.49
CCDC61Q9Y6R9 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.49□□□□□ -2.49
CCDC61Q9Y6R9 RNU6-1043P-201ENST00000410355 99 ntBASIC-0.5□□□□□ -2.49
CCDC61Q9Y6R9 SNORD83B-201ENST00000386745 93 ntBASIC-0.52□□□□□ -2.49
CCDC61Q9Y6R9 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.52□□□□□ -2.49
CCDC61Q9Y6R9 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.53□□□□□ -2.49
CCDC61Q9Y6R9 MIR3165-201ENST00000579874 75 ntBASIC-0.53□□□□□ -2.49
CCDC61Q9Y6R9 RNY4-201ENST00000516507 96 ntBASIC-0.54□□□□□ -2.5
CCDC61Q9Y6R9 MIR4499-201ENST00000584834 69 ntBASIC-0.54□□□□□ -2.5
CCDC61Q9Y6R9 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.55□□□□□ -2.5
CCDC61Q9Y6R9 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.55□□□□□ -2.5
CCDC61Q9Y6R9 RNU6-841P-201ENST00000383872 107 ntBASIC-0.56□□□□□ -2.5
CCDC61Q9Y6R9 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.56□□□□□ -2.5
CCDC61Q9Y6R9 RNU6-854P-201ENST00000364036 107 ntBASIC-0.57□□□□□ -2.5
CCDC61Q9Y6R9 AC097484.2-201ENST00000509147 251 ntBASIC-0.57□□□□□ -2.5
CCDC61Q9Y6R9 Y_RNA.63-201ENST00000362841 102 ntBASIC-0.58□□□□□ -2.5
CCDC61Q9Y6R9 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.6□□□□□ -2.51
CCDC61Q9Y6R9 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.6□□□□□ -2.51
CCDC61Q9Y6R9 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.6□□□□□ -2.51
CCDC61Q9Y6R9 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.6□□□□□ -2.51
CCDC61Q9Y6R9 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.6□□□□□ -2.51
CCDC61Q9Y6R9 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.6□□□□□ -2.51
CCDC61Q9Y6R9 RNU6-118P-201ENST00000516552 102 ntBASIC-0.61□□□□□ -2.51
CCDC61Q9Y6R9 MIR4306-201ENST00000583390 91 ntBASIC-0.61□□□□□ -2.51
CCDC61Q9Y6R9 uc_338.19-201ENST00000616808 99 ntBASIC-0.62□□□□□ -2.51
CCDC61Q9Y6R9 RNU6-119P-201ENST00000364882 107 ntBASIC-0.63□□□□□ -2.51
CCDC61Q9Y6R9 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.66□□□□□ -2.52
CCDC61Q9Y6R9 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.67□□□□□ -2.52
CCDC61Q9Y6R9 MIR548AM-201ENST00000584298 74 ntBASIC-0.67□□□□□ -2.52
CCDC61Q9Y6R9 MIR8485-201ENST00000401372 91 ntBASIC-0.68□□□□□ -2.52
CCDC61Q9Y6R9 HLA-S-202ENST00000425174 53 ntBASIC-0.68□□□□□ -2.52
CCDC61Q9Y6R9 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.68□□□□□ -2.52
CCDC61Q9Y6R9 RNU6-627P-201ENST00000364032 102 ntBASIC-0.69□□□□□ -2.52
CCDC61Q9Y6R9 RNU6-706P-201ENST00000517229 104 ntBASIC-0.69□□□□□ -2.52
CCDC61Q9Y6R9 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.7□□□□□ -2.52
CCDC61Q9Y6R9 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.7□□□□□ -2.52
CCDC61Q9Y6R9 SNORD54-201ENST00000459159 67 ntBASIC-0.72□□□□□ -2.52
CCDC61Q9Y6R9 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.73□□□□□ -2.53
CCDC61Q9Y6R9 MIR5591-201ENST00000578248 65 ntBASIC-0.74□□□□□ -2.53
CCDC61Q9Y6R9 Y_RNA.59-201ENST00000362828 102 ntBASIC-0.75□□□□□ -2.53
CCDC61Q9Y6R9 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.75□□□□□ -2.53
CCDC61Q9Y6R9 MIR6502-201ENST00000617296 76 ntBASIC-0.76□□□□□ -2.53
CCDC61Q9Y6R9 MIRLET7A2-201ENST00000362105 72 ntBASIC-0.8□□□□□ -2.54
CCDC61Q9Y6R9 MIR3139-201ENST00000579145 76 ntBASIC-0.8□□□□□ -2.54
CCDC61Q9Y6R9 SNORD18.1-201ENST00000363807 70 ntBASIC-0.83□□□□□ -2.54
CCDC61Q9Y6R9 RNU6-1121P-201ENST00000516802 109 ntBASIC-0.83□□□□□ -2.54
CCDC61Q9Y6R9 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.84□□□□□ -2.54
CCDC61Q9Y6R9 MT-TM-201ENST00000387377 68 ntBASIC-0.85□□□□□ -2.55
CCDC61Q9Y6R9 RNU6-737P-201ENST00000365370 107 ntBASIC-0.86□□□□□ -2.55
CCDC61Q9Y6R9 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.86□□□□□ -2.55
CCDC61Q9Y6R9 MIR4520-1-201ENST00000582609 70 ntBASIC-0.86□□□□□ -2.55
CCDC61Q9Y6R9 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.87□□□□□ -2.55
CCDC61Q9Y6R9 MIR4770-201ENST00000579149 58 ntBASIC-0.88□□□□□ -2.55
CCDC61Q9Y6R9 RNA5SP86-201ENST00000390869 98 ntBASIC-0.89□□□□□ -2.55
CCDC61Q9Y6R9 MIR487B-201ENST00000385021 84 ntBASIC-0.9□□□□□ -2.55
CCDC61Q9Y6R9 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.9□□□□□ -2.55
CCDC61Q9Y6R9 MIR4756-201ENST00000577874 78 ntBASIC-0.9□□□□□ -2.55
CCDC61Q9Y6R9 Y_RNA.566-201ENST00000384735 101 ntBASIC-0.91□□□□□ -2.56
CCDC61Q9Y6R9 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.95□□□□□ -2.56
CCDC61Q9Y6R9 Y_RNA.186-201ENST00000363899 92 ntBASIC-0.96□□□□□ -2.56
CCDC61Q9Y6R9 AC108019.1-201ENST00000512540 175 ntBASIC-0.96□□□□□ -2.56
CCDC61Q9Y6R9 MIR664B-201ENST00000626756 61 ntBASIC-0.99□□□□□ -2.57
CCDC61Q9Y6R9 RNU6-803P-201ENST00000516034 102 ntBASIC-1.01□□□□□ -2.57
CCDC61Q9Y6R9 RNA5SP405-201ENST00000363059 114 ntBASIC-1.03□□□□□ -2.57
CCDC61Q9Y6R9 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.04□□□□□ -2.58
CCDC61Q9Y6R9 MIR124-1-201ENST00000385275 85 ntBASIC-1.04□□□□□ -2.58
CCDC61Q9Y6R9 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.06□□□□□ -2.58
CCDC61Q9Y6R9 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.07□□□□□ -2.58
CCDC61Q9Y6R9 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.07□□□□□ -2.58
CCDC61Q9Y6R9 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.14□□□□□ -2.59
CCDC61Q9Y6R9 RNU6-230P-201ENST00000362457 104 ntBASIC-1.15□□□□□ -2.59
CCDC61Q9Y6R9 Y_RNA.137-201ENST00000363455 112 ntBASIC-1.15□□□□□ -2.59
CCDC61Q9Y6R9 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.15□□□□□ -2.59
CCDC61Q9Y6R9 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.15□□□□□ -2.59
CCDC61Q9Y6R9 AL731768.1-201ENST00000603124 139 ntBASIC-1.16□□□□□ -2.6
CCDC61Q9Y6R9 RNU6-194P-201ENST00000363862 105 ntBASIC-1.18□□□□□ -2.6
CCDC61Q9Y6R9 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.21□□□□□ -2.6
CCDC61Q9Y6R9 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.22□□□□□ -2.6
CCDC61Q9Y6R9 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.25□□□□□ -2.61
CCDC61Q9Y6R9 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.25□□□□□ -2.61
CCDC61Q9Y6R9 MIR548AH-201ENST00000637109 76 ntBASIC-1.28□□□□□ -2.61
CCDC61Q9Y6R9 MIR4748-201ENST00000578076 82 ntBASIC-1.29□□□□□ -2.62
CCDC61Q9Y6R9 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.3□□□□□ -2.62
CCDC61Q9Y6R9 RNA5SP106-201ENST00000517274 100 ntBASIC-1.3□□□□□ -2.62
CCDC61Q9Y6R9 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
CCDC61Q9Y6R9 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.37□□□□□ -2.63
CCDC61Q9Y6R9 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.38□□□□□ -2.63
CCDC61Q9Y6R9 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.38□□□□□ -2.63
CCDC61Q9Y6R9 RNU6-892P-201ENST00000410335 99 ntBASIC-1.39□□□□□ -2.63
CCDC61Q9Y6R9 RNY4P9-201ENST00000363194 97 ntBASIC-1.41□□□□□ -2.64
CCDC61Q9Y6R9 RNY4P10-201ENST00000365571 96 ntBASIC-1.41□□□□□ -2.64
CCDC61Q9Y6R9 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.42□□□□□ -2.64
CCDC61Q9Y6R9 AL359920.1-201ENST00000618332 176 ntBASIC-1.43□□□□□ -2.64
CCDC61Q9Y6R9 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.44□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 307 ms