Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.5□□□□□ -2.49
VPS9D1Q9Y2B5 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.5□□□□□ -2.49
VPS9D1Q9Y2B5 MIR4770-201ENST00000579149 58 ntBASIC-0.5□□□□□ -2.49
VPS9D1Q9Y2B5 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.5□□□□□ -2.49
VPS9D1Q9Y2B5 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.5□□□□□ -2.49
VPS9D1Q9Y2B5 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.5□□□□□ -2.49
VPS9D1Q9Y2B5 MIR1246-201ENST00000636535 73 ntBASIC-0.5□□□□□ -2.49
VPS9D1Q9Y2B5 MIR548AH-201ENST00000637109 76 ntBASIC-0.5□□□□□ -2.49
VPS9D1Q9Y2B5 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.5□□□□□ -2.49
VPS9D1Q9Y2B5 RNU6-1277P-201ENST00000364561 107 ntBASIC-0.51□□□□□ -2.49
VPS9D1Q9Y2B5 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.51□□□□□ -2.49
VPS9D1Q9Y2B5 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.51□□□□□ -2.49
VPS9D1Q9Y2B5 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.52□□□□□ -2.49
VPS9D1Q9Y2B5 SNORD115-45-201ENST00000391078 81 ntBASIC-0.52□□□□□ -2.49
VPS9D1Q9Y2B5 MIR664B-201ENST00000626756 61 ntBASIC-0.52□□□□□ -2.49
VPS9D1Q9Y2B5 RNU6-118P-201ENST00000516552 102 ntBASIC-0.53□□□□□ -2.49
VPS9D1Q9Y2B5 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.53□□□□□ -2.49
VPS9D1Q9Y2B5 RNA5SP405-201ENST00000363059 114 ntBASIC-0.54□□□□□ -2.5
VPS9D1Q9Y2B5 RNU6-737P-201ENST00000365370 107 ntBASIC-0.54□□□□□ -2.5
VPS9D1Q9Y2B5 MIR587-201ENST00000384845 96 ntBASIC-0.54□□□□□ -2.5
VPS9D1Q9Y2B5 MIR3139-201ENST00000579145 76 ntBASIC-0.54□□□□□ -2.5
VPS9D1Q9Y2B5 MIR3165-201ENST00000579874 75 ntBASIC-0.54□□□□□ -2.5
VPS9D1Q9Y2B5 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.55□□□□□ -2.5
VPS9D1Q9Y2B5 Y_RNA.79-201ENST00000362992 113 ntBASIC-0.56□□□□□ -2.5
VPS9D1Q9Y2B5 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.56□□□□□ -2.5
VPS9D1Q9Y2B5 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.56□□□□□ -2.5
VPS9D1Q9Y2B5 MIR4748-201ENST00000578076 82 ntBASIC-0.56□□□□□ -2.5
VPS9D1Q9Y2B5 RNU6-1306P-201ENST00000365219 99 ntBASIC-0.57□□□□□ -2.5
VPS9D1Q9Y2B5 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.57□□□□□ -2.5
VPS9D1Q9Y2B5 RNU6-30P-201ENST00000384561 107 ntBASIC-0.57□□□□□ -2.5
VPS9D1Q9Y2B5 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.57□□□□□ -2.5
VPS9D1Q9Y2B5 RNA5SP180-201ENST00000516181 101 ntBASIC-0.57□□□□□ -2.5
VPS9D1Q9Y2B5 Y_RNA.59-201ENST00000362828 102 ntBASIC-0.58□□□□□ -2.5
VPS9D1Q9Y2B5 RNU6-194P-201ENST00000363862 105 ntBASIC-0.58□□□□□ -2.5
VPS9D1Q9Y2B5 RNU6-1161P-201ENST00000516176 102 ntBASIC-0.58□□□□□ -2.5
VPS9D1Q9Y2B5 MIR548AX-201ENST00000580117 73 ntBASIC-0.58□□□□□ -2.5
VPS9D1Q9Y2B5 MIR4320-201ENST00000636981 65 ntBASIC-0.58□□□□□ -2.5
VPS9D1Q9Y2B5 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.59□□□□□ -2.5
VPS9D1Q9Y2B5 AL731768.1-201ENST00000603124 139 ntBASIC-0.59□□□□□ -2.5
VPS9D1Q9Y2B5 MT-TM-201ENST00000387377 68 ntBASIC-0.6□□□□□ -2.51
VPS9D1Q9Y2B5 MIR5693-201ENST00000577722 73 ntBASIC-0.6□□□□□ -2.51
VPS9D1Q9Y2B5 Y_RNA.663-201ENST00000516043 101 ntBASIC-0.61□□□□□ -2.51
VPS9D1Q9Y2B5 AL627230.5-201ENST00000619807 58 ntBASIC-0.61□□□□□ -2.51
VPS9D1Q9Y2B5 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.62□□□□□ -2.51
VPS9D1Q9Y2B5 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.62□□□□□ -2.51
VPS9D1Q9Y2B5 Y_RNA.652-201ENST00000458902 102 ntBASIC-0.62□□□□□ -2.51
VPS9D1Q9Y2B5 SNX3P1Y-201ENST00000615757 176 ntBASIC-0.62□□□□□ -2.51
VPS9D1Q9Y2B5 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.62□□□□□ -2.51
VPS9D1Q9Y2B5 RNU6-230P-201ENST00000362457 104 ntBASIC-0.63□□□□□ -2.51
VPS9D1Q9Y2B5 Y_RNA.513-201ENST00000384522 100 ntBASIC-0.63□□□□□ -2.51
VPS9D1Q9Y2B5 MIR1285-2-201ENST00000408311 88 ntBASIC-0.63□□□□□ -2.51
VPS9D1Q9Y2B5 TARS-215ENST00000626210 201 ntTSL 5 BASIC-0.63□□□□□ -2.51
VPS9D1Q9Y2B5 Y_RNA.397-201ENST00000383950 98 ntBASIC-0.65□□□□□ -2.51
VPS9D1Q9Y2B5 RNU6-627P-201ENST00000364032 102 ntBASIC-0.66□□□□□ -2.52
VPS9D1Q9Y2B5 MIR496-201ENST00000385226 102 ntBASIC-0.66□□□□□ -2.52
VPS9D1Q9Y2B5 MIRLET7A3-201ENST00000362116 74 ntBASIC-0.67□□□□□ -2.52
VPS9D1Q9Y2B5 MIR409-201ENST00000362237 79 ntBASIC-0.67□□□□□ -2.52
VPS9D1Q9Y2B5 RNA5SP449-201ENST00000516871 130 ntBASIC-0.68□□□□□ -2.52
VPS9D1Q9Y2B5 AL359920.1-201ENST00000618332 176 ntBASIC-0.68□□□□□ -2.52
VPS9D1Q9Y2B5 RNY4P9-201ENST00000363194 97 ntBASIC-0.69□□□□□ -2.52
VPS9D1Q9Y2B5 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.69□□□□□ -2.52
VPS9D1Q9Y2B5 RNY4P25-201ENST00000459254 96 ntBASIC-0.71□□□□□ -2.52
VPS9D1Q9Y2B5 MIR4441-201ENST00000582623 100 ntBASIC-0.71□□□□□ -2.52
VPS9D1Q9Y2B5 RNA5SP93-201ENST00000362525 114 ntBASIC-0.72□□□□□ -2.52
VPS9D1Q9Y2B5 RNU6-1044P-201ENST00000384755 107 ntBASIC-0.72□□□□□ -2.52
VPS9D1Q9Y2B5 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.72□□□□□ -2.52
VPS9D1Q9Y2B5 SNORD114-13-201ENST00000364377 74 ntBASIC-0.73□□□□□ -2.53
VPS9D1Q9Y2B5 MIR365A-201ENST00000362260 87 ntBASIC-0.74□□□□□ -2.53
VPS9D1Q9Y2B5 RNA5SP331-201ENST00000364986 107 ntBASIC-0.74□□□□□ -2.53
VPS9D1Q9Y2B5 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.75□□□□□ -2.53
VPS9D1Q9Y2B5 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.76□□□□□ -2.53
VPS9D1Q9Y2B5 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.77□□□□□ -2.53
VPS9D1Q9Y2B5 Y_RNA.612-201ENST00000410717 95 ntBASIC-0.77□□□□□ -2.53
VPS9D1Q9Y2B5 RNY4P27-201ENST00000363341 96 ntBASIC-0.78□□□□□ -2.53
VPS9D1Q9Y2B5 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.79□□□□□ -2.54
VPS9D1Q9Y2B5 U4.2-201ENST00000618561 85 ntBASIC-0.79□□□□□ -2.54
VPS9D1Q9Y2B5 Y_RNA.266-201ENST00000364678 96 ntBASIC-0.81□□□□□ -2.54
VPS9D1Q9Y2B5 MIR601-201ENST00000385256 79 ntBASIC-0.81□□□□□ -2.54
VPS9D1Q9Y2B5 RNA5SP266-201ENST00000410273 108 ntBASIC-0.81□□□□□ -2.54
VPS9D1Q9Y2B5 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.81□□□□□ -2.54
VPS9D1Q9Y2B5 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-0.81□□□□□ -2.54
VPS9D1Q9Y2B5 RNU6-665P-201ENST00000384639 107 ntBASIC-0.82□□□□□ -2.54
VPS9D1Q9Y2B5 Y_RNA.137-201ENST00000363455 112 ntBASIC-0.83□□□□□ -2.54
VPS9D1Q9Y2B5 SNX3P1X-201ENST00000414887 175 ntBASIC-0.84□□□□□ -2.54
VPS9D1Q9Y2B5 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.85□□□□□ -2.55
VPS9D1Q9Y2B5 RNA5SP106-201ENST00000517274 100 ntBASIC-0.85□□□□□ -2.55
VPS9D1Q9Y2B5 Y_RNA.830-201ENST00000628531 96 ntBASIC-0.85□□□□□ -2.55
VPS9D1Q9Y2B5 MIR509-1-201ENST00000385265 94 ntBASIC-0.86□□□□□ -2.55
VPS9D1Q9Y2B5 MIR509-2-201ENST00000390724 91 ntBASIC-0.86□□□□□ -2.55
VPS9D1Q9Y2B5 RNY4P10-201ENST00000365571 96 ntBASIC-0.87□□□□□ -2.55
VPS9D1Q9Y2B5 Y_RNA.511-201ENST00000384514 103 ntBASIC-0.87□□□□□ -2.55
VPS9D1Q9Y2B5 RNU6-803P-201ENST00000516034 102 ntBASIC-0.87□□□□□ -2.55
VPS9D1Q9Y2B5 Y_RNA.165-201ENST00000363721 102 ntBASIC-0.88□□□□□ -2.55
VPS9D1Q9Y2B5 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.89□□□□□ -2.55
VPS9D1Q9Y2B5 RNU6-892P-201ENST00000410335 99 ntBASIC-0.89□□□□□ -2.55
VPS9D1Q9Y2B5 SNORD54-201ENST00000459159 67 ntBASIC-0.89□□□□□ -2.55
VPS9D1Q9Y2B5 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.89□□□□□ -2.55
VPS9D1Q9Y2B5 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.89□□□□□ -2.55
VPS9D1Q9Y2B5 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.89□□□□□ -2.55
VPS9D1Q9Y2B5 RNU4-85P-201ENST00000364675 123 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 198.5 ms