Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RNA5SP275-201ENST00000363936 118 ntBASIC-0.23□□□□□ -2.45
RNF39Q9H2S5 RNU6-706P-201ENST00000517229 104 ntBASIC-0.25□□□□□ -2.45
RNF39Q9H2S5 uc_338.19-201ENST00000616808 99 ntBASIC-0.25□□□□□ -2.45
RNF39Q9H2S5 MIR4520-1-201ENST00000582609 70 ntBASIC-0.26□□□□□ -2.45
RNF39Q9H2S5 MIR4499-201ENST00000584834 69 ntBASIC-0.26□□□□□ -2.45
RNF39Q9H2S5 MT-TQ-201ENST00000387372 72 ntBASIC-0.27□□□□□ -2.45
RNF39Q9H2S5 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.29□□□□□ -2.46
RNF39Q9H2S5 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.29□□□□□ -2.46
RNF39Q9H2S5 MIR548AZ-201ENST00000616567 95 ntBASIC-0.3□□□□□ -2.46
RNF39Q9H2S5 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.32□□□□□ -2.46
RNF39Q9H2S5 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
RNF39Q9H2S5 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.32□□□□□ -2.46
RNF39Q9H2S5 MIRLET7A3-201ENST00000362116 74 ntBASIC-0.33□□□□□ -2.46
RNF39Q9H2S5 MIR3681-201ENST00000580089 72 ntBASIC-0.33□□□□□ -2.46
RNF39Q9H2S5 SNX3P1X-201ENST00000414887 175 ntBASIC-0.34□□□□□ -2.46
RNF39Q9H2S5 RNA5SP449-201ENST00000516871 130 ntBASIC-0.34□□□□□ -2.46
RNF39Q9H2S5 MIR4320-201ENST00000636981 65 ntBASIC-0.35□□□□□ -2.47
RNF39Q9H2S5 MIR4723-201ENST00000585070 81 ntBASIC-0.37□□□□□ -2.47
RNF39Q9H2S5 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.37□□□□□ -2.47
RNF39Q9H2S5 MIR587-201ENST00000384845 96 ntBASIC-0.38□□□□□ -2.47
RNF39Q9H2S5 MIR601-201ENST00000385256 79 ntBASIC-0.38□□□□□ -2.47
RNF39Q9H2S5 MIR4748-201ENST00000578076 82 ntBASIC-0.38□□□□□ -2.47
RNF39Q9H2S5 MIR198-201ENST00000637333 62 ntBASIC-0.38□□□□□ -2.47
RNF39Q9H2S5 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.39□□□□□ -2.47
RNF39Q9H2S5 SCARNA17-201ENST00000516183 144 ntBASIC-0.39□□□□□ -2.47
RNF39Q9H2S5 U4.2-201ENST00000618561 85 ntBASIC-0.39□□□□□ -2.47
RNF39Q9H2S5 RNA5SP86-201ENST00000390869 98 ntBASIC-0.4□□□□□ -2.47
RNF39Q9H2S5 RNY4P9-201ENST00000363194 97 ntBASIC-0.41□□□□□ -2.48
RNF39Q9H2S5 MIR196A1-201ENST00000388006 70 ntBASIC-0.41□□□□□ -2.48
RNF39Q9H2S5 SNX3P1Y-201ENST00000615757 176 ntBASIC-0.42□□□□□ -2.48
RNF39Q9H2S5 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.46□□□□□ -2.48
RNF39Q9H2S5 RNU6-10P-201ENST00000384036 107 ntBASIC-0.46□□□□□ -2.48
RNF39Q9H2S5 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.46□□□□□ -2.48
RNF39Q9H2S5 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.46□□□□□ -2.48
RNF39Q9H2S5 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.46□□□□□ -2.48
RNF39Q9H2S5 RNU6-118P-201ENST00000516552 102 ntBASIC-0.47□□□□□ -2.48
RNF39Q9H2S5 MIR4324-201ENST00000584846 72 ntBASIC-0.47□□□□□ -2.48
RNF39Q9H2S5 MIR6738-201ENST00000619620 64 ntBASIC-0.47□□□□□ -2.48
RNF39Q9H2S5 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.53□□□□□ -2.49
RNF39Q9H2S5 RNA5SP461-201ENST00000516451 104 ntBASIC-0.53□□□□□ -2.49
RNF39Q9H2S5 MIR3115-201ENST00000577915 68 ntBASIC-0.53□□□□□ -2.49
RNF39Q9H2S5 SNORD114-3-201ENST00000364969 75 ntBASIC-0.54□□□□□ -2.5
RNF39Q9H2S5 SNORD83B-201ENST00000386745 93 ntBASIC-0.54□□□□□ -2.5
RNF39Q9H2S5 MIR1207-201ENST00000408249 87 ntBASIC-0.54□□□□□ -2.5
RNF39Q9H2S5 RNY4P25-201ENST00000459254 96 ntBASIC-0.54□□□□□ -2.5
RNF39Q9H2S5 RNA5SP180-201ENST00000516181 101 ntBASIC-0.54□□□□□ -2.5
RNF39Q9H2S5 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.55□□□□□ -2.5
RNF39Q9H2S5 RNY4P27-201ENST00000363341 96 ntBASIC-0.58□□□□□ -2.5
RNF39Q9H2S5 MIR378F-201ENST00000578143 78 ntBASIC-0.58□□□□□ -2.5
RNF39Q9H2S5 AC108019.1-201ENST00000512540 175 ntBASIC-0.59□□□□□ -2.5
RNF39Q9H2S5 MIR365A-201ENST00000362260 87 ntBASIC-0.6□□□□□ -2.51
RNF39Q9H2S5 MIR4441-201ENST00000582623 100 ntBASIC-0.6□□□□□ -2.51
RNF39Q9H2S5 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.61□□□□□ -2.51
RNF39Q9H2S5 MIR4756-201ENST00000577874 78 ntBASIC-0.61□□□□□ -2.51
RNF39Q9H2S5 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.63□□□□□ -2.51
RNF39Q9H2S5 MIR3165-201ENST00000579874 75 ntBASIC-0.65□□□□□ -2.51
RNF39Q9H2S5 MIR1285-2-201ENST00000408311 88 ntBASIC-0.66□□□□□ -2.52
RNF39Q9H2S5 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.67□□□□□ -2.52
RNF39Q9H2S5 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.69□□□□□ -2.52
RNF39Q9H2S5 MIR4306-201ENST00000583390 91 ntBASIC-0.71□□□□□ -2.52
RNF39Q9H2S5 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.71□□□□□ -2.52
RNF39Q9H2S5 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.73□□□□□ -2.53
RNF39Q9H2S5 MIR5591-201ENST00000578248 65 ntBASIC-0.74□□□□□ -2.53
RNF39Q9H2S5 MIR4770-201ENST00000579149 58 ntBASIC-0.74□□□□□ -2.53
RNF39Q9H2S5 Y_RNA.266-201ENST00000364678 96 ntBASIC-0.75□□□□□ -2.53
RNF39Q9H2S5 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.76□□□□□ -2.53
RNF39Q9H2S5 Y_RNA.513-201ENST00000384522 100 ntBASIC-0.77□□□□□ -2.53
RNF39Q9H2S5 MIR1246-201ENST00000636535 73 ntBASIC-0.78□□□□□ -2.53
RNF39Q9H2S5 SNORD114-13-201ENST00000364377 74 ntBASIC-0.8□□□□□ -2.54
RNF39Q9H2S5 RNY4P7-201ENST00000364600 96 ntBASIC-0.81□□□□□ -2.54
RNF39Q9H2S5 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.82□□□□□ -2.54
RNF39Q9H2S5 RNU6-1044P-201ENST00000384755 107 ntBASIC-0.83□□□□□ -2.54
RNF39Q9H2S5 HLA-S-202ENST00000425174 53 ntBASIC-0.83□□□□□ -2.54
RNF39Q9H2S5 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.84□□□□□ -2.54
RNF39Q9H2S5 MIR5693-201ENST00000577722 73 ntBASIC-0.84□□□□□ -2.54
RNF39Q9H2S5 RNU6-194P-201ENST00000363862 105 ntBASIC-0.86□□□□□ -2.55
RNF39Q9H2S5 MIR664B-201ENST00000626756 61 ntBASIC-0.87□□□□□ -2.55
RNF39Q9H2S5 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.88□□□□□ -2.55
RNF39Q9H2S5 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.88□□□□□ -2.55
RNF39Q9H2S5 RNU6-119P-201ENST00000364882 107 ntBASIC-0.89□□□□□ -2.55
RNF39Q9H2S5 MIR496-201ENST00000385226 102 ntBASIC-0.89□□□□□ -2.55
RNF39Q9H2S5 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.9□□□□□ -2.55
RNF39Q9H2S5 Y_RNA.79-201ENST00000362992 113 ntBASIC-0.93□□□□□ -2.56
RNF39Q9H2S5 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.94□□□□□ -2.56
RNF39Q9H2S5 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.94□□□□□ -2.56
RNF39Q9H2S5 SNORD18.1-201ENST00000363807 70 ntBASIC-0.96□□□□□ -2.56
RNF39Q9H2S5 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.96□□□□□ -2.56
RNF39Q9H2S5 RNY4-201ENST00000516507 96 ntBASIC-1□□□□□ -2.57
RNF39Q9H2S5 RNA5SP405-201ENST00000363059 114 ntBASIC-1.01□□□□□ -2.57
RNF39Q9H2S5 SNORD54-201ENST00000459159 67 ntBASIC-1.02□□□□□ -2.57
RNF39Q9H2S5 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.02□□□□□ -2.57
RNF39Q9H2S5 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.03□□□□□ -2.57
RNF39Q9H2S5 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.04□□□□□ -2.58
RNF39Q9H2S5 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.04□□□□□ -2.58
RNF39Q9H2S5 RNA5SP93-201ENST00000362525 114 ntBASIC-1.06□□□□□ -2.58
RNF39Q9H2S5 RNY4P19-201ENST00000362530 96 ntBASIC-1.09□□□□□ -2.58
RNF39Q9H2S5 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.11□□□□□ -2.59
RNF39Q9H2S5 RNU6-230P-201ENST00000362457 104 ntBASIC-1.12□□□□□ -2.59
RNF39Q9H2S5 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.13□□□□□ -2.59
RNF39Q9H2S5 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms