Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 MIRLET7A2-201ENST00000362105 72 ntBASIC-0.41□□□□□ -2.48
CNTNAP3BQ96NU0 MIR4441-201ENST00000582623 100 ntBASIC-0.41□□□□□ -2.48
CNTNAP3BQ96NU0 MIR548AM-201ENST00000584298 74 ntBASIC-0.41□□□□□ -2.48
CNTNAP3BQ96NU0 MIR6502-201ENST00000617296 76 ntBASIC-0.41□□□□□ -2.48
CNTNAP3BQ96NU0 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.42□□□□□ -2.48
CNTNAP3BQ96NU0 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.43□□□□□ -2.48
CNTNAP3BQ96NU0 MIR8485-201ENST00000401372 91 ntBASIC-0.43□□□□□ -2.48
CNTNAP3BQ96NU0 MIR6738-201ENST00000619620 64 ntBASIC-0.43□□□□□ -2.48
CNTNAP3BQ96NU0 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.44□□□□□ -2.48
CNTNAP3BQ96NU0 RNY4P7-201ENST00000364600 96 ntBASIC-0.44□□□□□ -2.48
CNTNAP3BQ96NU0 MIR4499-201ENST00000584834 69 ntBASIC-0.47□□□□□ -2.48
CNTNAP3BQ96NU0 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.49□□□□□ -2.49
CNTNAP3BQ96NU0 MIR1285-2-201ENST00000408311 88 ntBASIC-0.5□□□□□ -2.49
CNTNAP3BQ96NU0 RNA5SP461-201ENST00000516451 104 ntBASIC-0.51□□□□□ -2.49
CNTNAP3BQ96NU0 MIR124-1-201ENST00000385275 85 ntBASIC-0.52□□□□□ -2.49
CNTNAP3BQ96NU0 MIR4324-201ENST00000584846 72 ntBASIC-0.52□□□□□ -2.49
CNTNAP3BQ96NU0 uc_338.19-201ENST00000616808 99 ntBASIC-0.52□□□□□ -2.49
CNTNAP3BQ96NU0 RNA5SP180-201ENST00000516181 101 ntBASIC-0.53□□□□□ -2.49
CNTNAP3BQ96NU0 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.54□□□□□ -2.5
CNTNAP3BQ96NU0 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.54□□□□□ -2.5
CNTNAP3BQ96NU0 MIR196A1-201ENST00000388006 70 ntBASIC-0.55□□□□□ -2.5
CNTNAP3BQ96NU0 RNU6-627P-201ENST00000364032 102 ntBASIC-0.56□□□□□ -2.5
CNTNAP3BQ96NU0 RNU6-737P-201ENST00000365370 107 ntBASIC-0.57□□□□□ -2.5
CNTNAP3BQ96NU0 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.59□□□□□ -2.5
CNTNAP3BQ96NU0 MIR487B-201ENST00000385021 84 ntBASIC-0.61□□□□□ -2.51
CNTNAP3BQ96NU0 SCARNA17-201ENST00000516183 144 ntBASIC-0.61□□□□□ -2.51
CNTNAP3BQ96NU0 SNORD83B-201ENST00000386745 93 ntBASIC-0.64□□□□□ -2.51
CNTNAP3BQ96NU0 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.65□□□□□ -2.51
CNTNAP3BQ96NU0 RNU6-1161P-201ENST00000516176 102 ntBASIC-0.65□□□□□ -2.51
CNTNAP3BQ96NU0 MIR4520-1-201ENST00000582609 70 ntBASIC-0.65□□□□□ -2.51
CNTNAP3BQ96NU0 RNA5SP86-201ENST00000390869 98 ntBASIC-0.67□□□□□ -2.52
CNTNAP3BQ96NU0 MIR548AH-201ENST00000637109 76 ntBASIC-0.68□□□□□ -2.52
CNTNAP3BQ96NU0 AL731768.1-201ENST00000603124 139 ntBASIC-0.7□□□□□ -2.52
CNTNAP3BQ96NU0 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.71□□□□□ -2.52
CNTNAP3BQ96NU0 MIR3115-201ENST00000577915 68 ntBASIC-0.71□□□□□ -2.52
CNTNAP3BQ96NU0 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.71□□□□□ -2.52
CNTNAP3BQ96NU0 MIR3165-201ENST00000579874 75 ntBASIC-0.74□□□□□ -2.53
CNTNAP3BQ96NU0 MIR4306-201ENST00000583390 91 ntBASIC-0.76□□□□□ -2.53
CNTNAP3BQ96NU0 Y_RNA.663-201ENST00000516043 101 ntBASIC-0.77□□□□□ -2.53
CNTNAP3BQ96NU0 RNU6-706P-201ENST00000517229 104 ntBASIC-0.8□□□□□ -2.54
CNTNAP3BQ96NU0 Y_RNA.137-201ENST00000363455 112 ntBASIC-0.82□□□□□ -2.54
CNTNAP3BQ96NU0 RNU6-119P-201ENST00000364882 107 ntBASIC-0.82□□□□□ -2.54
CNTNAP3BQ96NU0 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.82□□□□□ -2.54
CNTNAP3BQ96NU0 MIR4748-201ENST00000578076 82 ntBASIC-0.82□□□□□ -2.54
CNTNAP3BQ96NU0 RNY4-201ENST00000516507 96 ntBASIC-0.84□□□□□ -2.54
CNTNAP3BQ96NU0 RNU6-1277P-201ENST00000364561 107 ntBASIC-0.85□□□□□ -2.55
CNTNAP3BQ96NU0 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.85□□□□□ -2.55
CNTNAP3BQ96NU0 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
CNTNAP3BQ96NU0 RNU6-892P-201ENST00000410335 99 ntBASIC-0.85□□□□□ -2.55
CNTNAP3BQ96NU0 AC108019.1-201ENST00000512540 175 ntBASIC-0.85□□□□□ -2.55
CNTNAP3BQ96NU0 SNORD115-45-201ENST00000391078 81 ntBASIC-0.86□□□□□ -2.55
CNTNAP3BQ96NU0 MIR4770-201ENST00000579149 58 ntBASIC-0.86□□□□□ -2.55
CNTNAP3BQ96NU0 MIR5591-201ENST00000578248 65 ntBASIC-0.87□□□□□ -2.55
CNTNAP3BQ96NU0 MIR4756-201ENST00000577874 78 ntBASIC-0.89□□□□□ -2.55
CNTNAP3BQ96NU0 AL359920.1-201ENST00000618332 176 ntBASIC-0.89□□□□□ -2.55
CNTNAP3BQ96NU0 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.9□□□□□ -2.55
CNTNAP3BQ96NU0 MIR1246-201ENST00000636535 73 ntBASIC-0.91□□□□□ -2.56
CNTNAP3BQ96NU0 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.96□□□□□ -2.56
CNTNAP3BQ96NU0 RNU6-118P-201ENST00000516552 102 ntBASIC-0.96□□□□□ -2.56
CNTNAP3BQ96NU0 MIR496-201ENST00000385226 102 ntBASIC-0.98□□□□□ -2.57
CNTNAP3BQ96NU0 HLA-S-202ENST00000425174 53 ntBASIC-0.98□□□□□ -2.57
CNTNAP3BQ96NU0 Y_RNA.612-201ENST00000410717 95 ntBASIC-1□□□□□ -2.57
CNTNAP3BQ96NU0 Y_RNA.652-201ENST00000458902 102 ntBASIC-1□□□□□ -2.57
CNTNAP3BQ96NU0 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1□□□□□ -2.57
CNTNAP3BQ96NU0 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.01□□□□□ -2.57
CNTNAP3BQ96NU0 RNY4P9-201ENST00000363194 97 ntBASIC-1.02□□□□□ -2.57
CNTNAP3BQ96NU0 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.03□□□□□ -2.57
CNTNAP3BQ96NU0 MIR664B-201ENST00000626756 61 ntBASIC-1.03□□□□□ -2.57
CNTNAP3BQ96NU0 RNU6-226P-201ENST00000363778 107 ntBASIC-1.04□□□□□ -2.58
CNTNAP3BQ96NU0 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.05□□□□□ -2.58
CNTNAP3BQ96NU0 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.07□□□□□ -2.58
CNTNAP3BQ96NU0 SNORD18.1-201ENST00000363807 70 ntBASIC-1.08□□□□□ -2.58
CNTNAP3BQ96NU0 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.08□□□□□ -2.58
CNTNAP3BQ96NU0 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.11□□□□□ -2.59
CNTNAP3BQ96NU0 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.11□□□□□ -2.59
CNTNAP3BQ96NU0 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.15□□□□□ -2.59
CNTNAP3BQ96NU0 SNORD54-201ENST00000459159 67 ntBASIC-1.15□□□□□ -2.59
CNTNAP3BQ96NU0 RNA5SP93-201ENST00000362525 114 ntBASIC-1.17□□□□□ -2.6
CNTNAP3BQ96NU0 RNA5SP405-201ENST00000363059 114 ntBASIC-1.17□□□□□ -2.6
CNTNAP3BQ96NU0 RNU4-85P-201ENST00000364675 123 ntBASIC-1.17□□□□□ -2.6
CNTNAP3BQ96NU0 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.17□□□□□ -2.6
CNTNAP3BQ96NU0 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-1.17□□□□□ -2.6
CNTNAP3BQ96NU0 RNU6-194P-201ENST00000363862 105 ntBASIC-1.19□□□□□ -2.6
CNTNAP3BQ96NU0 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.19□□□□□ -2.6
CNTNAP3BQ96NU0 RNY4P25-201ENST00000459254 96 ntBASIC-1.19□□□□□ -2.6
CNTNAP3BQ96NU0 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.2□□□□□ -2.6
CNTNAP3BQ96NU0 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.24□□□□□ -2.61
CNTNAP3BQ96NU0 Y_RNA.165-201ENST00000363721 102 ntBASIC-1.29□□□□□ -2.62
CNTNAP3BQ96NU0 MIR5693-201ENST00000577722 73 ntBASIC-1.29□□□□□ -2.62
CNTNAP3BQ96NU0 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.3□□□□□ -2.62
CNTNAP3BQ96NU0 SNORD114-13-201ENST00000364377 74 ntBASIC-1.31□□□□□ -2.62
CNTNAP3BQ96NU0 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.34□□□□□ -2.62
CNTNAP3BQ96NU0 RNA5SP449-201ENST00000516871 130 ntBASIC-1.35□□□□□ -2.63
CNTNAP3BQ96NU0 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.37□□□□□ -2.63
CNTNAP3BQ96NU0 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.38□□□□□ -2.63
CNTNAP3BQ96NU0 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.43□□□□□ -2.64
CNTNAP3BQ96NU0 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.43□□□□□ -2.64
CNTNAP3BQ96NU0 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.48□□□□□ -2.65
CNTNAP3BQ96NU0 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.49□□□□□ -2.65
CNTNAP3BQ96NU0 MIR3139-201ENST00000579145 76 ntBASIC-1.5□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms