Protein–RNA interactions for Protein: Q5VXU3

CHIC1, Cysteine-rich hydrophobic domain-containing protein 1, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1Q5VXU3 uc_338.19-201ENST00000616808 99 ntBASIC-0.69□□□□□ -2.52
CHIC1Q5VXU3 MIR487B-201ENST00000385021 84 ntBASIC-0.7□□□□□ -2.52
CHIC1Q5VXU3 MIR4499-201ENST00000584834 69 ntBASIC-0.7□□□□□ -2.52
CHIC1Q5VXU3 MIR1207-201ENST00000408249 87 ntBASIC-0.75□□□□□ -2.53
CHIC1Q5VXU3 MIR4320-201ENST00000636981 65 ntBASIC-0.75□□□□□ -2.53
CHIC1Q5VXU3 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.78□□□□□ -2.53
CHIC1Q5VXU3 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.78□□□□□ -2.53
CHIC1Q5VXU3 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.78□□□□□ -2.53
CHIC1Q5VXU3 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.78□□□□□ -2.53
CHIC1Q5VXU3 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.79□□□□□ -2.54
CHIC1Q5VXU3 U4.2-201ENST00000618561 85 ntBASIC-0.81□□□□□ -2.54
CHIC1Q5VXU3 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.82□□□□□ -2.54
CHIC1Q5VXU3 MIR4520-1-201ENST00000582609 70 ntBASIC-0.82□□□□□ -2.54
CHIC1Q5VXU3 MIR3681-201ENST00000580089 72 ntBASIC-0.83□□□□□ -2.54
CHIC1Q5VXU3 RNU6-10P-201ENST00000384036 107 ntBASIC-0.88□□□□□ -2.55
CHIC1Q5VXU3 SNORD114-3-201ENST00000364969 75 ntBASIC-0.89□□□□□ -2.55
CHIC1Q5VXU3 MIR6738-201ENST00000619620 64 ntBASIC-0.89□□□□□ -2.55
CHIC1Q5VXU3 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.91□□□□□ -2.56
CHIC1Q5VXU3 MIR378F-201ENST00000578143 78 ntBASIC-0.91□□□□□ -2.56
CHIC1Q5VXU3 RNU6-706P-201ENST00000517229 104 ntBASIC-0.92□□□□□ -2.56
CHIC1Q5VXU3 MIR196A1-201ENST00000388006 70 ntBASIC-0.94□□□□□ -2.56
CHIC1Q5VXU3 RNU6-1277P-201ENST00000364561 107 ntBASIC-0.96□□□□□ -2.56
CHIC1Q5VXU3 AL359920.1-201ENST00000618332 176 ntBASIC-1□□□□□ -2.57
CHIC1Q5VXU3 MIR365A-201ENST00000362260 87 ntBASIC-1.04□□□□□ -2.58
CHIC1Q5VXU3 MIR4324-201ENST00000584846 72 ntBASIC-1.05□□□□□ -2.58
CHIC1Q5VXU3 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-1.06□□□□□ -2.58
CHIC1Q5VXU3 RNA5SP86-201ENST00000390869 98 ntBASIC-1.08□□□□□ -2.58
CHIC1Q5VXU3 SCARNA17-201ENST00000516183 144 ntBASIC-1.08□□□□□ -2.58
CHIC1Q5VXU3 SNORD83B-201ENST00000386745 93 ntBASIC-1.12□□□□□ -2.59
CHIC1Q5VXU3 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.12□□□□□ -2.59
CHIC1Q5VXU3 MIR3165-201ENST00000579874 75 ntBASIC-1.12□□□□□ -2.59
CHIC1Q5VXU3 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.14□□□□□ -2.59
CHIC1Q5VXU3 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.14□□□□□ -2.59
CHIC1Q5VXU3 MIR4441-201ENST00000582623 100 ntBASIC-1.14□□□□□ -2.59
CHIC1Q5VXU3 RNU6-226P-201ENST00000363778 107 ntBASIC-1.17□□□□□ -2.6
CHIC1Q5VXU3 MIR1285-2-201ENST00000408311 88 ntBASIC-1.17□□□□□ -2.6
CHIC1Q5VXU3 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.2□□□□□ -2.6
CHIC1Q5VXU3 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.2□□□□□ -2.6
CHIC1Q5VXU3 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.23□□□□□ -2.61
CHIC1Q5VXU3 RNA5SP180-201ENST00000516181 101 ntBASIC-1.25□□□□□ -2.61
CHIC1Q5VXU3 RNA5SP461-201ENST00000516451 104 ntBASIC-1.28□□□□□ -2.61
CHIC1Q5VXU3 MIR4748-201ENST00000578076 82 ntBASIC-1.28□□□□□ -2.61
CHIC1Q5VXU3 RNY4P27-201ENST00000363341 96 ntBASIC-1.29□□□□□ -2.62
CHIC1Q5VXU3 MIR3115-201ENST00000577915 68 ntBASIC-1.3□□□□□ -2.62
CHIC1Q5VXU3 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.32□□□□□ -2.62
CHIC1Q5VXU3 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.32□□□□□ -2.62
CHIC1Q5VXU3 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.36□□□□□ -2.63
CHIC1Q5VXU3 RNU6-118P-201ENST00000516552 102 ntBASIC-1.36□□□□□ -2.63
CHIC1Q5VXU3 RNU4-85P-201ENST00000364675 123 ntBASIC-1.37□□□□□ -2.63
CHIC1Q5VXU3 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.37□□□□□ -2.63
CHIC1Q5VXU3 Y_RNA.165-201ENST00000363721 102 ntBASIC-1.39□□□□□ -2.63
CHIC1Q5VXU3 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.39□□□□□ -2.63
CHIC1Q5VXU3 RNY4P9-201ENST00000363194 97 ntBASIC-1.4□□□□□ -2.63
CHIC1Q5VXU3 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.41□□□□□ -2.64
CHIC1Q5VXU3 AC108019.1-201ENST00000512540 175 ntBASIC-1.41□□□□□ -2.64
CHIC1Q5VXU3 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.43□□□□□ -2.64
CHIC1Q5VXU3 MIR4756-201ENST00000577874 78 ntBASIC-1.44□□□□□ -2.64
CHIC1Q5VXU3 MIR4306-201ENST00000583390 91 ntBASIC-1.44□□□□□ -2.64
CHIC1Q5VXU3 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.53□□□□□ -2.65
CHIC1Q5VXU3 RNA5SP449-201ENST00000516871 130 ntBASIC-1.55□□□□□ -2.66
CHIC1Q5VXU3 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.56□□□□□ -2.66
CHIC1Q5VXU3 MIR5591-201ENST00000578248 65 ntBASIC-1.57□□□□□ -2.66
CHIC1Q5VXU3 RNY4P7-201ENST00000364600 96 ntBASIC-1.58□□□□□ -2.66
CHIC1Q5VXU3 MIR1246-201ENST00000636535 73 ntBASIC-1.58□□□□□ -2.66
CHIC1Q5VXU3 RNU6-119P-201ENST00000364882 107 ntBASIC-1.62□□□□□ -2.67
CHIC1Q5VXU3 MIR4770-201ENST00000579149 58 ntBASIC-1.63□□□□□ -2.67
CHIC1Q5VXU3 RNY4P25-201ENST00000459254 96 ntBASIC-1.66□□□□□ -2.68
CHIC1Q5VXU3 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.73□□□□□ -2.69
CHIC1Q5VXU3 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.74□□□□□ -2.69
CHIC1Q5VXU3 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.75□□□□□ -2.69
CHIC1Q5VXU3 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.76□□□□□ -2.69
CHIC1Q5VXU3 HLA-S-202ENST00000425174 53 ntBASIC-1.77□□□□□ -2.69
CHIC1Q5VXU3 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.82□□□□□ -2.7
CHIC1Q5VXU3 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.85□□□□□ -2.71
CHIC1Q5VXU3 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.88□□□□□ -2.71
CHIC1Q5VXU3 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.89□□□□□ -2.71
CHIC1Q5VXU3 MIR664B-201ENST00000626756 61 ntBASIC-1.9□□□□□ -2.71
CHIC1Q5VXU3 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.93□□□□□ -2.72
CHIC1Q5VXU3 RNU6-194P-201ENST00000363862 105 ntBASIC-1.96□□□□□ -2.72
CHIC1Q5VXU3 MIR496-201ENST00000385226 102 ntBASIC-1.97□□□□□ -2.72
CHIC1Q5VXU3 SNORD18.1-201ENST00000363807 70 ntBASIC-1.99□□□□□ -2.73
CHIC1Q5VXU3 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.99□□□□□ -2.73
CHIC1Q5VXU3 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.05□□□□□ -2.74
CHIC1Q5VXU3 SNORD54-201ENST00000459159 67 ntBASIC-2.05□□□□□ -2.74
CHIC1Q5VXU3 MIR5693-201ENST00000577722 73 ntBASIC-2.05□□□□□ -2.74
CHIC1Q5VXU3 RNY4-201ENST00000516507 96 ntBASIC-2.06□□□□□ -2.74
CHIC1Q5VXU3 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.1□□□□□ -2.75
CHIC1Q5VXU3 SNORD114-13-201ENST00000364377 74 ntBASIC-2.14□□□□□ -2.75
CHIC1Q5VXU3 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.14□□□□□ -2.75
CHIC1Q5VXU3 RNA5SP405-201ENST00000363059 114 ntBASIC-2.15□□□□□ -2.75
CHIC1Q5VXU3 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.18□□□□□ -2.76
CHIC1Q5VXU3 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.2□□□□□ -2.76
CHIC1Q5VXU3 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.24□□□□□ -2.77
CHIC1Q5VXU3 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.25□□□□□ -2.77
CHIC1Q5VXU3 RNA5SP93-201ENST00000362525 114 ntBASIC-2.27□□□□□ -2.77
CHIC1Q5VXU3 RNU6-230P-201ENST00000362457 104 ntBASIC-2.52□□□□□ -2.81
CHIC1Q5VXU3 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.53□□□□□ -2.81
CHIC1Q5VXU3 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.54□□□□□ -2.82
CHIC1Q5VXU3 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.55□□□□□ -2.82
CHIC1Q5VXU3 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.59□□□□□ -2.82
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms