Protein–RNA interactions for Protein: P04264

KRT1, Keratin, type II cytoskeletal 1, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1P04264 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.27□□□□□ -2.45
KRT1P04264 RNU6-576P-201ENST00000390854 102 ntBASIC-0.28□□□□□ -2.45
KRT1P04264 MIR8485-201ENST00000401372 91 ntBASIC-0.28□□□□□ -2.45
KRT1P04264 RNU6-118P-201ENST00000516552 102 ntBASIC-0.28□□□□□ -2.45
KRT1P04264 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.28□□□□□ -2.45
KRT1P04264 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-0.28□□□□□ -2.45
KRT1P04264 Y_RNA.186-201ENST00000363899 92 ntBASIC-0.29□□□□□ -2.46
KRT1P04264 Y_RNA.406-201ENST00000383984 100 ntBASIC-0.29□□□□□ -2.46
KRT1P04264 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.3□□□□□ -2.46
KRT1P04264 RNU6-345P-201ENST00000517001 107 ntBASIC-0.3□□□□□ -2.46
KRT1P04264 RNU6-706P-201ENST00000517229 104 ntBASIC-0.3□□□□□ -2.46
KRT1P04264 MIR6502-201ENST00000617296 76 ntBASIC-0.3□□□□□ -2.46
KRT1P04264 RNU6-400P-201ENST00000391173 106 ntBASIC-0.31□□□□□ -2.46
KRT1P04264 RNU6-983P-201ENST00000516004 103 ntBASIC-0.31□□□□□ -2.46
KRT1P04264 MIR6874-201ENST00000635894 71 ntBASIC-0.31□□□□□ -2.46
KRT1P04264 HLA-S-202ENST00000425174 53 ntBASIC-0.32□□□□□ -2.46
KRT1P04264 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.32□□□□□ -2.46
KRT1P04264 MIR5591-201ENST00000578248 65 ntBASIC-0.32□□□□□ -2.46
KRT1P04264 MIR4520-1-201ENST00000582609 70 ntBASIC-0.32□□□□□ -2.46
KRT1P04264 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.33□□□□□ -2.46
KRT1P04264 MIR656-201ENST00000385224 78 ntBASIC-0.33□□□□□ -2.46
KRT1P04264 MIR4770-201ENST00000579149 58 ntBASIC-0.33□□□□□ -2.46
KRT1P04264 RNA5SP86-201ENST00000390869 98 ntBASIC-0.34□□□□□ -2.46
KRT1P04264 MIR487B-201ENST00000385021 84 ntBASIC-0.36□□□□□ -2.47
KRT1P04264 MIR548H1-201ENST00000408610 102 ntBASIC-0.36□□□□□ -2.47
KRT1P04264 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.36□□□□□ -2.47
KRT1P04264 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.38□□□□□ -2.47
KRT1P04264 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.38□□□□□ -2.47
KRT1P04264 SNORD18.1-201ENST00000363807 70 ntBASIC-0.38□□□□□ -2.47
KRT1P04264 MIR1254-1-201ENST00000408257 97 ntBASIC-0.38□□□□□ -2.47
KRT1P04264 AC108019.1-201ENST00000512540 175 ntBASIC-0.38□□□□□ -2.47
KRT1P04264 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.39□□□□□ -2.47
KRT1P04264 MIR4756-201ENST00000577874 78 ntBASIC-0.39□□□□□ -2.47
KRT1P04264 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.4□□□□□ -2.47
KRT1P04264 MIR3123-201ENST00000583417 75 ntBASIC-0.4□□□□□ -2.47
KRT1P04264 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.41□□□□□ -2.48
KRT1P04264 RNU6-1340P-201ENST00000384438 107 ntBASIC-0.41□□□□□ -2.48
KRT1P04264 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.41□□□□□ -2.48
KRT1P04264 MIR548AM-201ENST00000584298 74 ntBASIC-0.41□□□□□ -2.48
KRT1P04264 MIR664B-201ENST00000626756 61 ntBASIC-0.41□□□□□ -2.48
KRT1P04264 RNU6-841P-201ENST00000383872 107 ntBASIC-0.42□□□□□ -2.48
KRT1P04264 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.42□□□□□ -2.48
KRT1P04264 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.44□□□□□ -2.48
KRT1P04264 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.44□□□□□ -2.48
KRT1P04264 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.44□□□□□ -2.48
KRT1P04264 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.44□□□□□ -2.48
KRT1P04264 MIR3139-201ENST00000579145 76 ntBASIC-0.44□□□□□ -2.48
KRT1P04264 MIR548W-201ENST00000581970 74 ntBASIC-0.44□□□□□ -2.48
KRT1P04264 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.44□□□□□ -2.48
KRT1P04264 RNA5SP405-201ENST00000363059 114 ntBASIC-0.45□□□□□ -2.48
KRT1P04264 snoU13.10-201ENST00000459301 103 ntBASIC-0.45□□□□□ -2.48
KRT1P04264 RNU6-803P-201ENST00000516034 102 ntBASIC-0.46□□□□□ -2.48
KRT1P04264 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.46□□□□□ -2.48
KRT1P04264 RNU6-194P-201ENST00000363862 105 ntBASIC-0.47□□□□□ -2.48
KRT1P04264 MT-TM-201ENST00000387377 68 ntBASIC-0.47□□□□□ -2.48
KRT1P04264 MIR548T-201ENST00000408369 74 ntBASIC-0.47□□□□□ -2.48
KRT1P04264 MIR4748-201ENST00000578076 82 ntBASIC-0.47□□□□□ -2.48
KRT1P04264 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
KRT1P04264 AC097484.2-201ENST00000509147 251 ntBASIC-0.49□□□□□ -2.49
KRT1P04264 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.49□□□□□ -2.49
KRT1P04264 TARS-215ENST00000626210 201 ntTSL 5 BASIC-0.49□□□□□ -2.49
KRT1P04264 MIRLET7A2-201ENST00000362105 72 ntBASIC-0.5□□□□□ -2.49
KRT1P04264 SNORD113-3-201ENST00000364830 72 ntBASIC-0.5□□□□□ -2.49
KRT1P04264 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.5□□□□□ -2.49
KRT1P04264 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.5□□□□□ -2.49
KRT1P04264 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.5□□□□□ -2.49
KRT1P04264 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.5□□□□□ -2.49
KRT1P04264 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.5□□□□□ -2.49
KRT1P04264 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.5□□□□□ -2.49
KRT1P04264 RNU6-1306P-201ENST00000365219 99 ntBASIC-0.51□□□□□ -2.49
KRT1P04264 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.52□□□□□ -2.49
KRT1P04264 RNY4P9-201ENST00000363194 97 ntBASIC-0.53□□□□□ -2.49
KRT1P04264 Y_RNA.513-201ENST00000384522 100 ntBASIC-0.54□□□□□ -2.5
KRT1P04264 SNX3P1Y-201ENST00000615757 176 ntBASIC-0.54□□□□□ -2.5
KRT1P04264 Y_RNA.397-201ENST00000383950 98 ntBASIC-0.55□□□□□ -2.5
KRT1P04264 Y_RNA.63-201ENST00000362841 102 ntBASIC-0.56□□□□□ -2.5
KRT1P04264 RNU6-1277P-201ENST00000364561 107 ntBASIC-0.56□□□□□ -2.5
KRT1P04264 RNU6-230P-201ENST00000362457 104 ntBASIC-0.57□□□□□ -2.5
KRT1P04264 Y_RNA.59-201ENST00000362828 102 ntBASIC-0.57□□□□□ -2.5
KRT1P04264 MIR5693-201ENST00000577722 73 ntBASIC-0.57□□□□□ -2.5
KRT1P04264 AL731768.1-201ENST00000603124 139 ntBASIC-0.57□□□□□ -2.5
KRT1P04264 RNU6-1128P-201ENST00000362825 109 ntBASIC-0.59□□□□□ -2.5
KRT1P04264 Y_RNA.79-201ENST00000362992 113 ntBASIC-0.59□□□□□ -2.5
KRT1P04264 RNY4P25-201ENST00000459254 96 ntBASIC-0.6□□□□□ -2.51
KRT1P04264 MIRLET7A3-201ENST00000362116 74 ntBASIC-0.61□□□□□ -2.51
KRT1P04264 Y_RNA.658-201ENST00000515990 97 ntBASIC-0.61□□□□□ -2.51
KRT1P04264 RNU6-854P-201ENST00000364036 107 ntBASIC-0.62□□□□□ -2.51
KRT1P04264 AL359920.1-201ENST00000618332 176 ntBASIC-0.62□□□□□ -2.51
KRT1P04264 SNORD114-13-201ENST00000364377 74 ntBASIC-0.63□□□□□ -2.51
KRT1P04264 RNU6-737P-201ENST00000365370 107 ntBASIC-0.63□□□□□ -2.51
KRT1P04264 Y_RNA.520-201ENST00000384556 102 ntBASIC-0.63□□□□□ -2.51
KRT1P04264 Y_RNA.612-201ENST00000410717 95 ntBASIC-0.63□□□□□ -2.51
KRT1P04264 Y_RNA.652-201ENST00000458902 102 ntBASIC-0.63□□□□□ -2.51
KRT1P04264 Y_RNA.663-201ENST00000516043 101 ntBASIC-0.63□□□□□ -2.51
KRT1P04264 Y_RNA.830-201ENST00000628531 96 ntBASIC-0.63□□□□□ -2.51
KRT1P04264 Y_RNA.266-201ENST00000364678 96 ntBASIC-0.64□□□□□ -2.51
KRT1P04264 Y_RNA.511-201ENST00000384514 103 ntBASIC-0.65□□□□□ -2.51
KRT1P04264 RNU6-1044P-201ENST00000384755 107 ntBASIC-0.65□□□□□ -2.51
KRT1P04264 MIR124-1-201ENST00000385275 85 ntBASIC-0.65□□□□□ -2.51
KRT1P04264 SNORD115-45-201ENST00000391078 81 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms