Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.4□□□□□ -2.47
H3BM21 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.4□□□□□ -2.47
H3BM21 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.4□□□□□ -2.47
H3BM21 SCARNA17-201ENST00000516183 144 ntBASIC-0.41□□□□□ -2.48
H3BM21 MIR4499-201ENST00000584834 69 ntBASIC-0.41□□□□□ -2.48
H3BM21 MIR4324-201ENST00000584846 72 ntBASIC-0.41□□□□□ -2.48
H3BM21 SNORD83B-201ENST00000386745 93 ntBASIC-0.43□□□□□ -2.48
H3BM21 MIR196A1-201ENST00000388006 70 ntBASIC-0.43□□□□□ -2.48
H3BM21 MIR1207-201ENST00000408249 87 ntBASIC-0.44□□□□□ -2.48
H3BM21 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.44□□□□□ -2.48
H3BM21 RNA5SP461-201ENST00000516451 104 ntBASIC-0.45□□□□□ -2.48
H3BM21 MIR378F-201ENST00000578143 78 ntBASIC-0.46□□□□□ -2.48
H3BM21 SNORD114-3-201ENST00000364969 75 ntBASIC-0.47□□□□□ -2.48
H3BM21 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.48□□□□□ -2.49
H3BM21 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.48□□□□□ -2.49
H3BM21 MIR365A-201ENST00000362260 87 ntBASIC-0.5□□□□□ -2.49
H3BM21 MIR3115-201ENST00000577915 68 ntBASIC-0.5□□□□□ -2.49
H3BM21 MIR487B-201ENST00000385021 84 ntBASIC-0.51□□□□□ -2.49
H3BM21 RNU6-1161P-201ENST00000516176 102 ntBASIC-0.51□□□□□ -2.49
H3BM21 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.52□□□□□ -2.49
H3BM21 RNA5SP180-201ENST00000516181 101 ntBASIC-0.52□□□□□ -2.49
H3BM21 MIR4520-1-201ENST00000582609 70 ntBASIC-0.53□□□□□ -2.49
H3BM21 MIR4441-201ENST00000582623 100 ntBASIC-0.53□□□□□ -2.49
H3BM21 RNY4P27-201ENST00000363341 96 ntBASIC-0.54□□□□□ -2.5
H3BM21 MIR1285-2-201ENST00000408311 88 ntBASIC-0.54□□□□□ -2.5
H3BM21 MIR548AH-201ENST00000637109 76 ntBASIC-0.54□□□□□ -2.5
H3BM21 RNU6-892P-201ENST00000410335 99 ntBASIC-0.56□□□□□ -2.5
H3BM21 MIR3165-201ENST00000579874 75 ntBASIC-0.57□□□□□ -2.5
H3BM21 MIR4306-201ENST00000583390 91 ntBASIC-0.57□□□□□ -2.5
H3BM21 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.57□□□□□ -2.5
H3BM21 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.58□□□□□ -2.5
H3BM21 AL731768.1-201ENST00000603124 139 ntBASIC-0.6□□□□□ -2.51
H3BM21 Y_RNA.137-201ENST00000363455 112 ntBASIC-0.61□□□□□ -2.51
H3BM21 Y_RNA.663-201ENST00000516043 101 ntBASIC-0.61□□□□□ -2.51
H3BM21 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.62□□□□□ -2.51
H3BM21 RNA5SP86-201ENST00000390869 98 ntBASIC-0.63□□□□□ -2.51
H3BM21 RNU6-706P-201ENST00000517229 104 ntBASIC-0.65□□□□□ -2.51
H3BM21 MIR4770-201ENST00000579149 58 ntBASIC-0.66□□□□□ -2.52
H3BM21 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.67□□□□□ -2.52
H3BM21 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.67□□□□□ -2.52
H3BM21 MIR5591-201ENST00000578248 65 ntBASIC-0.67□□□□□ -2.52
H3BM21 MIR1246-201ENST00000636535 73 ntBASIC-0.67□□□□□ -2.52
H3BM21 SNORD115-45-201ENST00000391078 81 ntBASIC-0.7□□□□□ -2.52
H3BM21 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.71□□□□□ -2.52
H3BM21 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.71□□□□□ -2.52
H3BM21 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.71□□□□□ -2.52
H3BM21 HLA-S-202ENST00000425174 53 ntBASIC-0.71□□□□□ -2.52
H3BM21 RNU6-1277P-201ENST00000364561 107 ntBASIC-0.74□□□□□ -2.53
H3BM21 AC108019.1-201ENST00000512540 175 ntBASIC-0.74□□□□□ -2.53
H3BM21 RNY4P7-201ENST00000364600 96 ntBASIC-0.75□□□□□ -2.53
H3BM21 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.75□□□□□ -2.53
H3BM21 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
H3BM21 RNU6-226P-201ENST00000363778 107 ntBASIC-0.77□□□□□ -2.53
H3BM21 AL359920.1-201ENST00000618332 176 ntBASIC-0.77□□□□□ -2.53
H3BM21 MIR4748-201ENST00000578076 82 ntBASIC-0.78□□□□□ -2.53
H3BM21 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.78□□□□□ -2.53
H3BM21 RNU6-119P-201ENST00000364882 107 ntBASIC-0.79□□□□□ -2.54
H3BM21 MIR496-201ENST00000385226 102 ntBASIC-0.79□□□□□ -2.54
H3BM21 RNU6-118P-201ENST00000516552 102 ntBASIC-0.79□□□□□ -2.54
H3BM21 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.8□□□□□ -2.54
H3BM21 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.8□□□□□ -2.54
H3BM21 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.8□□□□□ -2.54
H3BM21 MIR4756-201ENST00000577874 78 ntBASIC-0.8□□□□□ -2.54
H3BM21 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.81□□□□□ -2.54
H3BM21 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.81□□□□□ -2.54
H3BM21 RNY4P9-201ENST00000363194 97 ntBASIC-0.82□□□□□ -2.54
H3BM21 SNORD18.1-201ENST00000363807 70 ntBASIC-0.82□□□□□ -2.54
H3BM21 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.83□□□□□ -2.54
H3BM21 MIR664B-201ENST00000626756 61 ntBASIC-0.83□□□□□ -2.54
H3BM21 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.84□□□□□ -2.54
H3BM21 Y_RNA.612-201ENST00000410717 95 ntBASIC-0.85□□□□□ -2.55
H3BM21 Y_RNA.652-201ENST00000458902 102 ntBASIC-0.85□□□□□ -2.55
H3BM21 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.88□□□□□ -2.55
H3BM21 SNX3P1Y-201ENST00000615757 176 ntBASIC-0.88□□□□□ -2.55
H3BM21 RNU6-194P-201ENST00000363862 105 ntBASIC-0.89□□□□□ -2.55
H3BM21 MIRLET7A3-201ENST00000362116 74 ntBASIC-0.9□□□□□ -2.55
H3BM21 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.9□□□□□ -2.55
H3BM21 RNY4-201ENST00000516507 96 ntBASIC-0.9□□□□□ -2.55
H3BM21 RNA5SP93-201ENST00000362525 114 ntBASIC-0.91□□□□□ -2.56
H3BM21 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-0.91□□□□□ -2.56
H3BM21 SNORD54-201ENST00000459159 67 ntBASIC-0.92□□□□□ -2.56
H3BM21 RNA5SP405-201ENST00000363059 114 ntBASIC-0.93□□□□□ -2.56
H3BM21 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.94□□□□□ -2.56
H3BM21 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.95□□□□□ -2.56
H3BM21 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.96□□□□□ -2.56
H3BM21 Y_RNA.513-201ENST00000384522 100 ntBASIC-0.98□□□□□ -2.57
H3BM21 RNY4P25-201ENST00000459254 96 ntBASIC-0.99□□□□□ -2.57
H3BM21 RNU4-85P-201ENST00000364675 123 ntBASIC-1.03□□□□□ -2.57
H3BM21 Y_RNA.165-201ENST00000363721 102 ntBASIC-1.08□□□□□ -2.58
H3BM21 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.08□□□□□ -2.58
H3BM21 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.09□□□□□ -2.58
H3BM21 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.1□□□□□ -2.59
H3BM21 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.11□□□□□ -2.59
H3BM21 MIR5693-201ENST00000577722 73 ntBASIC-1.11□□□□□ -2.59
H3BM21 RNA5SP449-201ENST00000516871 130 ntBASIC-1.13□□□□□ -2.59
H3BM21 MIR3139-201ENST00000579145 76 ntBASIC-1.13□□□□□ -2.59
H3BM21 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.13□□□□□ -2.59
H3BM21 SNORD114-13-201ENST00000364377 74 ntBASIC-1.16□□□□□ -2.6
H3BM21 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.16□□□□□ -2.6
H3BM21 MT-TM-201ENST00000387377 68 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms