Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AC013734.1-201ENST00000619329 111 ntBASIC-0.74□□□□□ -2.53
TRIM56Q9BRZ2 RNU6-164P-201ENST00000364604 103 ntBASIC-0.75□□□□□ -2.53
TRIM56Q9BRZ2 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.75□□□□□ -2.53
TRIM56Q9BRZ2 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.75□□□□□ -2.53
TRIM56Q9BRZ2 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.76□□□□□ -2.53
TRIM56Q9BRZ2 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.77□□□□□ -2.53
TRIM56Q9BRZ2 RNU6-563P-201ENST00000364872 108 ntBASIC-0.78□□□□□ -2.53
TRIM56Q9BRZ2 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.78□□□□□ -2.53
TRIM56Q9BRZ2 RNA5SP461-201ENST00000516451 104 ntBASIC-0.78□□□□□ -2.53
TRIM56Q9BRZ2 MIR4723-201ENST00000585070 81 ntBASIC-0.78□□□□□ -2.53
TRIM56Q9BRZ2 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.79□□□□□ -2.54
TRIM56Q9BRZ2 RNU6-576P-201ENST00000390854 102 ntBASIC-0.8□□□□□ -2.54
TRIM56Q9BRZ2 MIR3115-201ENST00000577915 68 ntBASIC-0.8□□□□□ -2.54
TRIM56Q9BRZ2 U6.97-201ENST00000636904 101 ntBASIC-0.8□□□□□ -2.54
TRIM56Q9BRZ2 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.81□□□□□ -2.54
TRIM56Q9BRZ2 SNORD18C-201ENST00000362704 69 ntBASIC-0.82□□□□□ -2.54
TRIM56Q9BRZ2 RNU6-59P-201ENST00000384787 107 ntBASIC-0.82□□□□□ -2.54
TRIM56Q9BRZ2 MIR198-201ENST00000637333 62 ntBASIC-0.82□□□□□ -2.54
TRIM56Q9BRZ2 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.83□□□□□ -2.54
TRIM56Q9BRZ2 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.84□□□□□ -2.54
TRIM56Q9BRZ2 SNORD83B-201ENST00000386745 93 ntBASIC-0.84□□□□□ -2.54
TRIM56Q9BRZ2 RNU6-79P-201ENST00000362511 107 ntBASIC-0.85□□□□□ -2.55
TRIM56Q9BRZ2 MIR378F-201ENST00000578143 78 ntBASIC-0.85□□□□□ -2.55
TRIM56Q9BRZ2 MIR601-201ENST00000385256 79 ntBASIC-0.86□□□□□ -2.55
TRIM56Q9BRZ2 AL500527.2-201ENST00000454105 95 ntBASIC-0.86□□□□□ -2.55
TRIM56Q9BRZ2 MIR379-201ENST00000362218 67 ntBASIC-0.89□□□□□ -2.55
TRIM56Q9BRZ2 MIR581-201ENST00000384895 96 ntBASIC-0.89□□□□□ -2.55
TRIM56Q9BRZ2 U4.2-201ENST00000618561 85 ntBASIC-0.91□□□□□ -2.56
TRIM56Q9BRZ2 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.93□□□□□ -2.56
TRIM56Q9BRZ2 MIR4499-201ENST00000584834 69 ntBASIC-0.93□□□□□ -2.56
TRIM56Q9BRZ2 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.93□□□□□ -2.56
TRIM56Q9BRZ2 RNU7-134P-201ENST00000458997 64 ntBASIC-0.94□□□□□ -2.56
TRIM56Q9BRZ2 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.94□□□□□ -2.56
TRIM56Q9BRZ2 RNU6-400P-201ENST00000391173 106 ntBASIC-0.95□□□□□ -2.56
TRIM56Q9BRZ2 RNA5SP180-201ENST00000516181 101 ntBASIC-0.95□□□□□ -2.56
TRIM56Q9BRZ2 uc_338.19-201ENST00000616808 99 ntBASIC-0.95□□□□□ -2.56
TRIM56Q9BRZ2 RNU6-695P-201ENST00000391157 104 ntBASIC-0.97□□□□□ -2.56
TRIM56Q9BRZ2 MIR3165-201ENST00000579874 75 ntBASIC-0.97□□□□□ -2.56
TRIM56Q9BRZ2 AC091912.2-201ENST00000624798 167 ntBASIC-0.97□□□□□ -2.56
TRIM56Q9BRZ2 U6.103-201ENST00000637085 61 ntBASIC-0.98□□□□□ -2.57
TRIM56Q9BRZ2 MIR4306-201ENST00000583390 91 ntBASIC-0.99□□□□□ -2.57
TRIM56Q9BRZ2 MIR6874-201ENST00000635894 71 ntBASIC-0.99□□□□□ -2.57
TRIM56Q9BRZ2 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.01□□□□□ -2.57
TRIM56Q9BRZ2 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.01□□□□□ -2.57
TRIM56Q9BRZ2 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.01□□□□□ -2.57
TRIM56Q9BRZ2 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.01□□□□□ -2.57
TRIM56Q9BRZ2 RNU6-68P-201ENST00000516576 104 ntBASIC-1.01□□□□□ -2.57
TRIM56Q9BRZ2 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.01□□□□□ -2.57
TRIM56Q9BRZ2 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.01□□□□□ -2.57
TRIM56Q9BRZ2 MIR1285-2-201ENST00000408311 88 ntBASIC-1.02□□□□□ -2.57
TRIM56Q9BRZ2 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.04□□□□□ -2.58
TRIM56Q9BRZ2 MIR365A-201ENST00000362260 87 ntBASIC-1.05□□□□□ -2.58
TRIM56Q9BRZ2 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.06□□□□□ -2.58
TRIM56Q9BRZ2 MIR4441-201ENST00000582623 100 ntBASIC-1.06□□□□□ -2.58
TRIM56Q9BRZ2 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.07□□□□□ -2.58
TRIM56Q9BRZ2 RNU6-226P-201ENST00000363778 107 ntBASIC-1.07□□□□□ -2.58
TRIM56Q9BRZ2 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.07□□□□□ -2.58
TRIM56Q9BRZ2 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.08□□□□□ -2.58
TRIM56Q9BRZ2 MIR1207-201ENST00000408249 87 ntBASIC-1.08□□□□□ -2.58
TRIM56Q9BRZ2 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.08□□□□□ -2.58
TRIM56Q9BRZ2 MIR1246-201ENST00000636535 73 ntBASIC-1.08□□□□□ -2.58
TRIM56Q9BRZ2 RNU6-724P-201ENST00000390958 105 ntBASIC-1.1□□□□□ -2.59
TRIM56Q9BRZ2 RNU6-706P-201ENST00000517229 104 ntBASIC-1.1□□□□□ -2.59
TRIM56Q9BRZ2 SNORD114-3-201ENST00000364969 75 ntBASIC-1.11□□□□□ -2.59
TRIM56Q9BRZ2 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.11□□□□□ -2.59
TRIM56Q9BRZ2 SNORD115.2-201ENST00000391126 59 ntBASIC-1.12□□□□□ -2.59
TRIM56Q9BRZ2 RNY4P27-201ENST00000363341 96 ntBASIC-1.13□□□□□ -2.59
TRIM56Q9BRZ2 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.16□□□□□ -2.6
TRIM56Q9BRZ2 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.17□□□□□ -2.6
TRIM56Q9BRZ2 RNU6-912P-201ENST00000363800 104 ntBASIC-1.18□□□□□ -2.6
TRIM56Q9BRZ2 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.18□□□□□ -2.6
TRIM56Q9BRZ2 HLA-S-202ENST00000425174 53 ntBASIC-1.19□□□□□ -2.6
TRIM56Q9BRZ2 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.2□□□□□ -2.6
TRIM56Q9BRZ2 MIR8485-201ENST00000401372 91 ntBASIC-1.21□□□□□ -2.6
TRIM56Q9BRZ2 MIR6502-201ENST00000617296 76 ntBASIC-1.21□□□□□ -2.6
TRIM56Q9BRZ2 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-1.22□□□□□ -2.6
TRIM56Q9BRZ2 MIR3123-201ENST00000583417 75 ntBASIC-1.22□□□□□ -2.6
TRIM56Q9BRZ2 AC138207.3-201ENST00000585289 166 ntBASIC-1.22□□□□□ -2.6
TRIM56Q9BRZ2 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.23□□□□□ -2.61
TRIM56Q9BRZ2 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.23□□□□□ -2.61
TRIM56Q9BRZ2 RNU6-836P-201ENST00000362920 107 ntBASIC-1.24□□□□□ -2.61
TRIM56Q9BRZ2 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.24□□□□□ -2.61
TRIM56Q9BRZ2 MIR548H1-201ENST00000408610 102 ntBASIC-1.25□□□□□ -2.61
TRIM56Q9BRZ2 MIR5591-201ENST00000578248 65 ntBASIC-1.25□□□□□ -2.61
TRIM56Q9BRZ2 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.27□□□□□ -2.61
TRIM56Q9BRZ2 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.27□□□□□ -2.61
TRIM56Q9BRZ2 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.28□□□□□ -2.61
TRIM56Q9BRZ2 FTX_4.1-201ENST00000616291 147 ntBASIC-1.28□□□□□ -2.61
TRIM56Q9BRZ2 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.29□□□□□ -2.62
TRIM56Q9BRZ2 RNA5SP224-201ENST00000365069 126 ntBASIC-1.3□□□□□ -2.62
TRIM56Q9BRZ2 RNU6-841P-201ENST00000383872 107 ntBASIC-1.31□□□□□ -2.62
TRIM56Q9BRZ2 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.31□□□□□ -2.62
TRIM56Q9BRZ2 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.31□□□□□ -2.62
TRIM56Q9BRZ2 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.32□□□□□ -2.62
TRIM56Q9BRZ2 MIR496-201ENST00000385226 102 ntBASIC-1.32□□□□□ -2.62
TRIM56Q9BRZ2 RNU6-983P-201ENST00000516004 103 ntBASIC-1.32□□□□□ -2.62
TRIM56Q9BRZ2 RNU6-345P-201ENST00000517001 107 ntBASIC-1.32□□□□□ -2.62
TRIM56Q9BRZ2 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.33□□□□□ -2.62
TRIM56Q9BRZ2 MIR4770-201ENST00000579149 58 ntBASIC-1.35□□□□□ -2.63
TRIM56Q9BRZ2 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.36□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms