Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 RNA5SP266-201ENST00000410273 108 ntBASIC-0.03□□□□□ -2.41
SH3RF1Q7Z6J0 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.03□□□□□ -2.41
SH3RF1Q7Z6J0 Y_RNA.406-201ENST00000383984 100 ntBASIC-0.05□□□□□ -2.42
SH3RF1Q7Z6J0 MIR214-201ENST00000385214 110 ntBASIC-0.05□□□□□ -2.42
SH3RF1Q7Z6J0 RNU6-164P-201ENST00000364604 103 ntBASIC-0.07□□□□□ -2.42
SH3RF1Q7Z6J0 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.07□□□□□ -2.42
SH3RF1Q7Z6J0 SNORD64-201ENST00000386683 67 ntBASIC-0.07□□□□□ -2.42
SH3RF1Q7Z6J0 MIR548T-201ENST00000408369 74 ntBASIC-0.07□□□□□ -2.42
SH3RF1Q7Z6J0 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
SH3RF1Q7Z6J0 RPS29P8-201ENST00000445109 171 ntBASIC-0.09□□□□□ -2.42
SH3RF1Q7Z6J0 SNORD114-28-201ENST00000363610 72 ntBASIC-0.11□□□□□ -2.43
SH3RF1Q7Z6J0 MIR656-201ENST00000385224 78 ntBASIC-0.12□□□□□ -2.43
SH3RF1Q7Z6J0 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-0.12□□□□□ -2.43
SH3RF1Q7Z6J0 SNORD114-14-201ENST00000362723 75 ntBASIC-0.13□□□□□ -2.43
SH3RF1Q7Z6J0 RNA5SP451-201ENST00000410588 110 ntBASIC-0.13□□□□□ -2.43
SH3RF1Q7Z6J0 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.13□□□□□ -2.43
SH3RF1Q7Z6J0 MIR224-201ENST00000384889 81 ntBASIC-0.14□□□□□ -2.43
SH3RF1Q7Z6J0 AL500527.2-201ENST00000454105 95 ntBASIC-0.14□□□□□ -2.43
SH3RF1Q7Z6J0 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.14□□□□□ -2.43
SH3RF1Q7Z6J0 MIR4723-201ENST00000585070 81 ntBASIC-0.14□□□□□ -2.43
SH3RF1Q7Z6J0 SNORA3B-201ENST00000391305 131 ntBASIC-0.15□□□□□ -2.43
SH3RF1Q7Z6J0 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.15□□□□□ -2.43
SH3RF1Q7Z6J0 MIR382-201ENST00000637119 76 ntBASIC-0.15□□□□□ -2.43
SH3RF1Q7Z6J0 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.16□□□□□ -2.44
SH3RF1Q7Z6J0 RNU6-345P-201ENST00000517001 107 ntBASIC-0.16□□□□□ -2.44
SH3RF1Q7Z6J0 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.18□□□□□ -2.44
SH3RF1Q7Z6J0 MIR4436A-201ENST00000585278 85 ntBASIC-0.18□□□□□ -2.44
SH3RF1Q7Z6J0 SNX3P1X-201ENST00000414887 175 ntBASIC-0.19□□□□□ -2.44
SH3RF1Q7Z6J0 RNU7-134P-201ENST00000458997 64 ntBASIC-0.2□□□□□ -2.44
SH3RF1Q7Z6J0 MIR548AX-201ENST00000580117 73 ntBASIC-0.2□□□□□ -2.44
SH3RF1Q7Z6J0 MIR8064-201ENST00000612863 90 ntBASIC-0.2□□□□□ -2.44
SH3RF1Q7Z6J0 MIR1254-1-201ENST00000408257 97 ntBASIC-0.21□□□□□ -2.44
SH3RF1Q7Z6J0 SNORD14C-201ENST00000365382 88 ntBASIC-0.22□□□□□ -2.44
SH3RF1Q7Z6J0 snoU83B.1-201ENST00000517136 88 ntBASIC-0.22□□□□□ -2.44
SH3RF1Q7Z6J0 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.23□□□□□ -2.45
SH3RF1Q7Z6J0 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.23□□□□□ -2.45
SH3RF1Q7Z6J0 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.23□□□□□ -2.45
SH3RF1Q7Z6J0 MIR196A2-201ENST00000385189 110 ntBASIC-0.23□□□□□ -2.45
SH3RF1Q7Z6J0 MIR548H1-201ENST00000408610 102 ntBASIC-0.23□□□□□ -2.45
SH3RF1Q7Z6J0 SNORD126-201ENST00000459475 77 ntBASIC-0.23□□□□□ -2.45
SH3RF1Q7Z6J0 RNU6-284P-201ENST00000411105 106 ntBASIC-0.25□□□□□ -2.45
SH3RF1Q7Z6J0 SNORD114-25-201ENST00000363742 72 ntBASIC-0.27□□□□□ -2.45
SH3RF1Q7Z6J0 RNU6-400P-201ENST00000391173 106 ntBASIC-0.27□□□□□ -2.45
SH3RF1Q7Z6J0 AC091912.2-201ENST00000624798 167 ntBASIC-0.27□□□□□ -2.45
SH3RF1Q7Z6J0 MIR6874-201ENST00000635894 71 ntBASIC-0.27□□□□□ -2.45
SH3RF1Q7Z6J0 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.29□□□□□ -2.46
SH3RF1Q7Z6J0 RNU6-320P-201ENST00000516511 106 ntBASIC-0.29□□□□□ -2.46
SH3RF1Q7Z6J0 RNU6-576P-201ENST00000390854 102 ntBASIC-0.3□□□□□ -2.46
SH3RF1Q7Z6J0 MIR3681-201ENST00000580089 72 ntBASIC-0.31□□□□□ -2.46
SH3RF1Q7Z6J0 RNA5SP275-201ENST00000363936 118 ntBASIC-0.32□□□□□ -2.46
SH3RF1Q7Z6J0 RNU6-1340P-201ENST00000384438 107 ntBASIC-0.32□□□□□ -2.46
SH3RF1Q7Z6J0 RNU4-63P-201ENST00000411313 118 ntBASIC-0.32□□□□□ -2.46
SH3RF1Q7Z6J0 SNORD113-3-201ENST00000364830 72 ntBASIC-0.35□□□□□ -2.47
SH3RF1Q7Z6J0 MIR548W-201ENST00000581970 74 ntBASIC-0.35□□□□□ -2.47
SH3RF1Q7Z6J0 MIR3123-201ENST00000583417 75 ntBASIC-0.35□□□□□ -2.47
SH3RF1Q7Z6J0 MIR548AZ-201ENST00000616567 95 ntBASIC-0.35□□□□□ -2.47
SH3RF1Q7Z6J0 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.37□□□□□ -2.47
SH3RF1Q7Z6J0 snoU13.10-201ENST00000459301 103 ntBASIC-0.37□□□□□ -2.47
SH3RF1Q7Z6J0 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.39□□□□□ -2.47
SH3RF1Q7Z6J0 SNORA32.3-201ENST00000384772 121 ntBASIC-0.42□□□□□ -2.48
SH3RF1Q7Z6J0 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.43□□□□□ -2.48
SH3RF1Q7Z6J0 MIR601-201ENST00000385256 79 ntBASIC-0.44□□□□□ -2.48
SH3RF1Q7Z6J0 MT-TQ-201ENST00000387372 72 ntBASIC-0.44□□□□□ -2.48
SH3RF1Q7Z6J0 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.44□□□□□ -2.48
SH3RF1Q7Z6J0 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.45□□□□□ -2.48
SH3RF1Q7Z6J0 MIR198-201ENST00000637333 62 ntBASIC-0.45□□□□□ -2.48
SH3RF1Q7Z6J0 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.47□□□□□ -2.48
SH3RF1Q7Z6J0 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.48□□□□□ -2.49
SH3RF1Q7Z6J0 RNU6-854P-201ENST00000364036 107 ntBASIC-0.49□□□□□ -2.49
SH3RF1Q7Z6J0 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.5□□□□□ -2.49
SH3RF1Q7Z6J0 U4.2-201ENST00000618561 85 ntBASIC-0.5□□□□□ -2.49
SH3RF1Q7Z6J0 RNU6-841P-201ENST00000383872 107 ntBASIC-0.51□□□□□ -2.49
SH3RF1Q7Z6J0 MIR587-201ENST00000384845 96 ntBASIC-0.52□□□□□ -2.49
SH3RF1Q7Z6J0 RNU6-620P-201ENST00000384017 96 ntBASIC-0.53□□□□□ -2.49
SH3RF1Q7Z6J0 MIR1207-201ENST00000408249 87 ntBASIC-0.53□□□□□ -2.49
SH3RF1Q7Z6J0 RNU6-1043P-201ENST00000410355 99 ntBASIC-0.53□□□□□ -2.49
SH3RF1Q7Z6J0 AC097484.2-201ENST00000509147 251 ntBASIC-0.54□□□□□ -2.5
SH3RF1Q7Z6J0 RNU6-983P-201ENST00000516004 103 ntBASIC-0.54□□□□□ -2.5
SH3RF1Q7Z6J0 MIR4320-201ENST00000636981 65 ntBASIC-0.54□□□□□ -2.5
SH3RF1Q7Z6J0 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.55□□□□□ -2.5
SH3RF1Q7Z6J0 RNU6-1024P-201ENST00000384199 107 ntBASIC-0.55□□□□□ -2.5
SH3RF1Q7Z6J0 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.55□□□□□ -2.5
SH3RF1Q7Z6J0 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.55□□□□□ -2.5
SH3RF1Q7Z6J0 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.55□□□□□ -2.5
SH3RF1Q7Z6J0 MIR6502-201ENST00000617296 76 ntBASIC-0.55□□□□□ -2.5
SH3RF1Q7Z6J0 MIR4499-201ENST00000584834 69 ntBASIC-0.56□□□□□ -2.5
SH3RF1Q7Z6J0 Y_RNA.63-201ENST00000362841 102 ntBASIC-0.57□□□□□ -2.5
SH3RF1Q7Z6J0 MIR196A1-201ENST00000388006 70 ntBASIC-0.57□□□□□ -2.5
SH3RF1Q7Z6J0 MIR8485-201ENST00000401372 91 ntBASIC-0.58□□□□□ -2.5
SH3RF1Q7Z6J0 MIR548AM-201ENST00000584298 74 ntBASIC-0.58□□□□□ -2.5
SH3RF1Q7Z6J0 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.59□□□□□ -2.5
SH3RF1Q7Z6J0 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.59□□□□□ -2.5
SH3RF1Q7Z6J0 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.59□□□□□ -2.5
SH3RF1Q7Z6J0 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.59□□□□□ -2.5
SH3RF1Q7Z6J0 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.59□□□□□ -2.5
SH3RF1Q7Z6J0 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.59□□□□□ -2.5
SH3RF1Q7Z6J0 uc_338.19-201ENST00000616808 99 ntBASIC-0.6□□□□□ -2.51
SH3RF1Q7Z6J0 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.61□□□□□ -2.51
SH3RF1Q7Z6J0 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.62□□□□□ -2.51
SH3RF1Q7Z6J0 RNU6-422P-201ENST00000384632 107 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 270.7 ms