Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 Y_RNA.374-201ENST00000365606 101 ntBASIC0.13□□□□□ -2.39
CD44P16070 AC023932.2-201ENST00000603176 175 ntBASIC0.13□□□□□ -2.39
CD44P16070 MIR371B-201ENST00000638082 66 ntBASIC0.09□□□□□ -2.4
CD44P16070 RNU6-576P-201ENST00000390854 102 ntBASIC0.08□□□□□ -2.4
CD44P16070 SNORA3B-201ENST00000391305 131 ntBASIC0.08□□□□□ -2.4
CD44P16070 Y_RNA.68-201ENST00000362881 102 ntBASIC0.07□□□□□ -2.4
CD44P16070 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
CD44P16070 MIR6718-201ENST00000616153 80 ntBASIC0.07□□□□□ -2.4
CD44P16070 RNA5SP285-201ENST00000516619 119 ntBASIC0.04□□□□□ -2.4
CD44P16070 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.04□□□□□ -2.4
CD44P16070 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
CD44P16070 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
CD44P16070 SNORD114-14-201ENST00000362723 75 ntBASIC0□□□□□ -2.41
CD44P16070 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0□□□□□ -2.41
CD44P16070 MIR5190-201ENST00000581537 80 ntBASIC0□□□□□ -2.41
CD44P16070 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
CD44P16070 AC097484.2-201ENST00000509147 251 ntBASIC-0.01□□□□□ -2.41
CD44P16070 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.01□□□□□ -2.41
CD44P16070 SNORD114-25-201ENST00000363742 72 ntBASIC-0.02□□□□□ -2.41
CD44P16070 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.02□□□□□ -2.41
CD44P16070 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.02□□□□□ -2.41
CD44P16070 AP001180.6-201ENST00000584918 159 ntBASIC-0.02□□□□□ -2.41
CD44P16070 MIR4436A-201ENST00000585278 85 ntBASIC-0.02□□□□□ -2.41
CD44P16070 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.03□□□□□ -2.41
CD44P16070 MIR2909-201ENST00000617113 69 ntBASIC-0.03□□□□□ -2.41
CD44P16070 MIRLET7A2-201ENST00000362105 72 ntBASIC-0.04□□□□□ -2.42
CD44P16070 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.04□□□□□ -2.42
CD44P16070 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.04□□□□□ -2.42
CD44P16070 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.04□□□□□ -2.42
CD44P16070 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.04□□□□□ -2.42
CD44P16070 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.04□□□□□ -2.42
CD44P16070 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.04□□□□□ -2.42
CD44P16070 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.08□□□□□ -2.42
CD44P16070 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.08□□□□□ -2.42
CD44P16070 SNORD114-31-201ENST00000363219 75 ntBASIC-0.09□□□□□ -2.42
CD44P16070 MIR6759-201ENST00000638110 65 ntBASIC-0.09□□□□□ -2.42
CD44P16070 RNU6-841P-201ENST00000383872 107 ntBASIC-0.1□□□□□ -2.43
CD44P16070 MIR5589-201ENST00000579442 60 ntBASIC-0.1□□□□□ -2.43
CD44P16070 RNU6-737P-201ENST00000365370 107 ntBASIC-0.11□□□□□ -2.43
CD44P16070 MIR124-1-201ENST00000385275 85 ntBASIC-0.11□□□□□ -2.43
CD44P16070 IGLVI-20-201ENST00000519296 130 ntBASIC-0.11□□□□□ -2.43
CD44P16070 MIR4636-201ENST00000582271 80 ntBASIC-0.11□□□□□ -2.43
CD44P16070 MIR4802-201ENST00000581881 80 ntBASIC-0.12□□□□□ -2.43
CD44P16070 RNU6-892P-201ENST00000410335 99 ntBASIC-0.13□□□□□ -2.43
CD44P16070 MIR6086-201ENST00000638065 55 ntBASIC-0.13□□□□□ -2.43
CD44P16070 MIR214-201ENST00000385214 110 ntBASIC-0.15□□□□□ -2.43
CD44P16070 MIR196A2-201ENST00000385189 110 ntBASIC-0.17□□□□□ -2.44
CD44P16070 RNA5SP368-201ENST00000364298 116 ntBASIC-0.18□□□□□ -2.44
CD44P16070 SNORD126-201ENST00000459475 77 ntBASIC-0.18□□□□□ -2.44
CD44P16070 MIR548AM-201ENST00000584298 74 ntBASIC-0.18□□□□□ -2.44
CD44P16070 RNU6-30P-201ENST00000384561 107 ntBASIC-0.2□□□□□ -2.44
CD44P16070 SNORD14C-201ENST00000365382 88 ntBASIC-0.21□□□□□ -2.44
CD44P16070 HAR1A.1-201ENST00000459583 118 ntBASIC-0.22□□□□□ -2.44
CD44P16070 RNU6-758P-201ENST00000516292 89 ntBASIC-0.22□□□□□ -2.44
CD44P16070 MIR8064-201ENST00000612863 90 ntBASIC-0.22□□□□□ -2.44
CD44P16070 SNORD114-28-201ENST00000363610 72 ntBASIC-0.23□□□□□ -2.45
CD44P16070 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.23□□□□□ -2.45
CD44P16070 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.24□□□□□ -2.45
CD44P16070 MIR4493-201ENST00000584016 73 ntBASIC-0.24□□□□□ -2.45
CD44P16070 MIR604-201ENST00000384880 94 ntBASIC-0.25□□□□□ -2.45
CD44P16070 snoU13.19-201ENST00000459148 104 ntBASIC-0.25□□□□□ -2.45
CD44P16070 RNA5SP476-201ENST00000516613 103 ntBASIC-0.25□□□□□ -2.45
CD44P16070 MIR101-1-201ENST00000362265 75 ntBASIC-0.28□□□□□ -2.45
CD44P16070 RNU6-1161P-201ENST00000516176 102 ntBASIC-0.29□□□□□ -2.46
CD44P16070 MIR548AH-201ENST00000637109 76 ntBASIC-0.3□□□□□ -2.46
CD44P16070 MIR8485-201ENST00000401372 91 ntBASIC-0.31□□□□□ -2.46
CD44P16070 RNA5SP451-201ENST00000410588 110 ntBASIC-0.32□□□□□ -2.46
CD44P16070 RNA5SP25-201ENST00000410815 110 ntBASIC-0.32□□□□□ -2.46
CD44P16070 RNA5SP275-201ENST00000363936 118 ntBASIC-0.33□□□□□ -2.46
CD44P16070 MIR224-201ENST00000384889 81 ntBASIC-0.33□□□□□ -2.46
CD44P16070 RNU6-320P-201ENST00000516511 106 ntBASIC-0.33□□□□□ -2.46
CD44P16070 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.33□□□□□ -2.46
CD44P16070 MIR6502-201ENST00000617296 76 ntBASIC-0.33□□□□□ -2.46
CD44P16070 RPS29P8-201ENST00000445109 171 ntBASIC-0.34□□□□□ -2.46
CD44P16070 SNORD114-15-201ENST00000364687 72 ntBASIC-0.35□□□□□ -2.47
CD44P16070 SNORA32.3-201ENST00000384772 121 ntBASIC-0.39□□□□□ -2.47
CD44P16070 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.39□□□□□ -2.47
CD44P16070 RNU4-63P-201ENST00000411313 118 ntBASIC-0.39□□□□□ -2.47
CD44P16070 SNORD95.1-201ENST00000364099 68 ntBASIC-0.4□□□□□ -2.47
CD44P16070 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.4□□□□□ -2.47
CD44P16070 MIR548AZ-201ENST00000616567 95 ntBASIC-0.4□□□□□ -2.47
CD44P16070 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.42□□□□□ -2.48
CD44P16070 MIR3681-201ENST00000580089 72 ntBASIC-0.44□□□□□ -2.48
CD44P16070 MIR4499-201ENST00000584834 69 ntBASIC-0.45□□□□□ -2.48
CD44P16070 Y_RNA.137-201ENST00000363455 112 ntBASIC-0.46□□□□□ -2.48
CD44P16070 Y_RNA.663-201ENST00000516043 101 ntBASIC-0.46□□□□□ -2.48
CD44P16070 AL731768.1-201ENST00000603124 139 ntBASIC-0.46□□□□□ -2.48
CD44P16070 uc_338.19-201ENST00000616808 99 ntBASIC-0.47□□□□□ -2.48
CD44P16070 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.49□□□□□ -2.49
CD44P16070 MIR487B-201ENST00000385021 84 ntBASIC-0.5□□□□□ -2.49
CD44P16070 MIR548AX-201ENST00000580117 73 ntBASIC-0.52□□□□□ -2.49
CD44P16070 AL627230.5-201ENST00000619807 58 ntBASIC-0.52□□□□□ -2.49
CD44P16070 MIR409-201ENST00000362237 79 ntBASIC-0.53□□□□□ -2.49
CD44P16070 RNA5SP266-201ENST00000410273 108 ntBASIC-0.54□□□□□ -2.5
CD44P16070 MT-TQ-201ENST00000387372 72 ntBASIC-0.55□□□□□ -2.5
CD44P16070 SNORD115-45-201ENST00000391078 81 ntBASIC-0.57□□□□□ -2.5
CD44P16070 MIR4520-1-201ENST00000582609 70 ntBASIC-0.57□□□□□ -2.5
CD44P16070 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.58□□□□□ -2.5
CD44P16070 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.6□□□□□ -2.51
CD44P16070 MIR196A1-201ENST00000388006 70 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms