Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 Y_RNA.374-201ENST00000365606 101 ntBASIC0.13□□□□□ -2.39
CD44P16070 AC023932.2-201ENST00000603176 175 ntBASIC0.13□□□□□ -2.39
CD44P16070 MIR371B-201ENST00000638082 66 ntBASIC0.09□□□□□ -2.4
CD44P16070 RNU6-576P-201ENST00000390854 102 ntBASIC0.08□□□□□ -2.4
CD44P16070 SNORA3B-201ENST00000391305 131 ntBASIC0.08□□□□□ -2.4
CD44P16070 Y_RNA.68-201ENST00000362881 102 ntBASIC0.07□□□□□ -2.4
CD44P16070 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
CD44P16070 MIR6718-201ENST00000616153 80 ntBASIC0.07□□□□□ -2.4
CD44P16070 RNA5SP285-201ENST00000516619 119 ntBASIC0.04□□□□□ -2.4
CD44P16070 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.04□□□□□ -2.4
CD44P16070 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
CD44P16070 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
CD44P16070 SNORD114-14-201ENST00000362723 75 ntBASIC0□□□□□ -2.41
CD44P16070 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0□□□□□ -2.41
CD44P16070 MIR5190-201ENST00000581537 80 ntBASIC0□□□□□ -2.41
CD44P16070 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
CD44P16070 AC097484.2-201ENST00000509147 251 ntBASIC-0.01□□□□□ -2.41
CD44P16070 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.01□□□□□ -2.41
CD44P16070 SNORD114-25-201ENST00000363742 72 ntBASIC-0.02□□□□□ -2.41
CD44P16070 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.02□□□□□ -2.41
CD44P16070 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.02□□□□□ -2.41
CD44P16070 AP001180.6-201ENST00000584918 159 ntBASIC-0.02□□□□□ -2.41
CD44P16070 MIR4436A-201ENST00000585278 85 ntBASIC-0.02□□□□□ -2.41
CD44P16070 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.03□□□□□ -2.41
CD44P16070 MIR2909-201ENST00000617113 69 ntBASIC-0.03□□□□□ -2.41
CD44P16070 MIRLET7A2-201ENST00000362105 72 ntBASIC-0.04□□□□□ -2.42
CD44P16070 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.04□□□□□ -2.42
CD44P16070 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.04□□□□□ -2.42
CD44P16070 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.04□□□□□ -2.42
CD44P16070 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.04□□□□□ -2.42
CD44P16070 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.04□□□□□ -2.42
CD44P16070 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.04□□□□□ -2.42
CD44P16070 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.08□□□□□ -2.42
CD44P16070 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.08□□□□□ -2.42
CD44P16070 SNORD114-31-201ENST00000363219 75 ntBASIC-0.09□□□□□ -2.42
CD44P16070 MIR6759-201ENST00000638110 65 ntBASIC-0.09□□□□□ -2.42
CD44P16070 RNU6-841P-201ENST00000383872 107 ntBASIC-0.1□□□□□ -2.43
CD44P16070 MIR5589-201ENST00000579442 60 ntBASIC-0.1□□□□□ -2.43
CD44P16070 RNU6-737P-201ENST00000365370 107 ntBASIC-0.11□□□□□ -2.43
CD44P16070 MIR124-1-201ENST00000385275 85 ntBASIC-0.11□□□□□ -2.43
CD44P16070 IGLVI-20-201ENST00000519296 130 ntBASIC-0.11□□□□□ -2.43
CD44P16070 MIR4636-201ENST00000582271 80 ntBASIC-0.11□□□□□ -2.43
CD44P16070 MIR4802-201ENST00000581881 80 ntBASIC-0.12□□□□□ -2.43
CD44P16070 RNU6-892P-201ENST00000410335 99 ntBASIC-0.13□□□□□ -2.43
CD44P16070 MIR6086-201ENST00000638065 55 ntBASIC-0.13□□□□□ -2.43
CD44P16070 MIR214-201ENST00000385214 110 ntBASIC-0.15□□□□□ -2.43
CD44P16070 MIR196A2-201ENST00000385189 110 ntBASIC-0.17□□□□□ -2.44
CD44P16070 RNA5SP368-201ENST00000364298 116 ntBASIC-0.18□□□□□ -2.44
CD44P16070 SNORD126-201ENST00000459475 77 ntBASIC-0.18□□□□□ -2.44
CD44P16070 MIR548AM-201ENST00000584298 74 ntBASIC-0.18□□□□□ -2.44
CD44P16070 RNU6-30P-201ENST00000384561 107 ntBASIC-0.2□□□□□ -2.44
CD44P16070 SNORD14C-201ENST00000365382 88 ntBASIC-0.21□□□□□ -2.44
CD44P16070 HAR1A.1-201ENST00000459583 118 ntBASIC-0.22□□□□□ -2.44
CD44P16070 RNU6-758P-201ENST00000516292 89 ntBASIC-0.22□□□□□ -2.44
CD44P16070 MIR8064-201ENST00000612863 90 ntBASIC-0.22□□□□□ -2.44
CD44P16070 SNORD114-28-201ENST00000363610 72 ntBASIC-0.23□□□□□ -2.45
CD44P16070 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.23□□□□□ -2.45
CD44P16070 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.24□□□□□ -2.45
CD44P16070 MIR4493-201ENST00000584016 73 ntBASIC-0.24□□□□□ -2.45
CD44P16070 MIR604-201ENST00000384880 94 ntBASIC-0.25□□□□□ -2.45
CD44P16070 snoU13.19-201ENST00000459148 104 ntBASIC-0.25□□□□□ -2.45
CD44P16070 RNA5SP476-201ENST00000516613 103 ntBASIC-0.25□□□□□ -2.45
CD44P16070 MIR101-1-201ENST00000362265 75 ntBASIC-0.28□□□□□ -2.45
CD44P16070 RNU6-1161P-201ENST00000516176 102 ntBASIC-0.29□□□□□ -2.46
CD44P16070 MIR548AH-201ENST00000637109 76 ntBASIC-0.3□□□□□ -2.46
CD44P16070 MIR8485-201ENST00000401372 91 ntBASIC-0.31□□□□□ -2.46
CD44P16070 RNA5SP451-201ENST00000410588 110 ntBASIC-0.32□□□□□ -2.46
CD44P16070 RNA5SP25-201ENST00000410815 110 ntBASIC-0.32□□□□□ -2.46
CD44P16070 RNA5SP275-201ENST00000363936 118 ntBASIC-0.33□□□□□ -2.46
CD44P16070 MIR224-201ENST00000384889 81 ntBASIC-0.33□□□□□ -2.46
CD44P16070 RNU6-320P-201ENST00000516511 106 ntBASIC-0.33□□□□□ -2.46
CD44P16070 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.33□□□□□ -2.46
CD44P16070 MIR6502-201ENST00000617296 76 ntBASIC-0.33□□□□□ -2.46
CD44P16070 RPS29P8-201ENST00000445109 171 ntBASIC-0.34□□□□□ -2.46
CD44P16070 SNORD114-15-201ENST00000364687 72 ntBASIC-0.35□□□□□ -2.47
CD44P16070 SNORA32.3-201ENST00000384772 121 ntBASIC-0.39□□□□□ -2.47
CD44P16070 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.39□□□□□ -2.47
CD44P16070 RNU4-63P-201ENST00000411313 118 ntBASIC-0.39□□□□□ -2.47
CD44P16070 SNORD95.1-201ENST00000364099 68 ntBASIC-0.4□□□□□ -2.47
CD44P16070 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.4□□□□□ -2.47
CD44P16070 MIR548AZ-201ENST00000616567 95 ntBASIC-0.4□□□□□ -2.47
CD44P16070 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.42□□□□□ -2.48
CD44P16070 MIR3681-201ENST00000580089 72 ntBASIC-0.44□□□□□ -2.48
CD44P16070 MIR4499-201ENST00000584834 69 ntBASIC-0.45□□□□□ -2.48
CD44P16070 Y_RNA.137-201ENST00000363455 112 ntBASIC-0.46□□□□□ -2.48
CD44P16070 Y_RNA.663-201ENST00000516043 101 ntBASIC-0.46□□□□□ -2.48
CD44P16070 AL731768.1-201ENST00000603124 139 ntBASIC-0.46□□□□□ -2.48
CD44P16070 uc_338.19-201ENST00000616808 99 ntBASIC-0.47□□□□□ -2.48
CD44P16070 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.49□□□□□ -2.49
CD44P16070 MIR487B-201ENST00000385021 84 ntBASIC-0.5□□□□□ -2.49
CD44P16070 MIR548AX-201ENST00000580117 73 ntBASIC-0.52□□□□□ -2.49
CD44P16070 AL627230.5-201ENST00000619807 58 ntBASIC-0.52□□□□□ -2.49
CD44P16070 MIR409-201ENST00000362237 79 ntBASIC-0.53□□□□□ -2.49
CD44P16070 RNA5SP266-201ENST00000410273 108 ntBASIC-0.54□□□□□ -2.5
CD44P16070 MT-TQ-201ENST00000387372 72 ntBASIC-0.55□□□□□ -2.5
CD44P16070 SNORD115-45-201ENST00000391078 81 ntBASIC-0.57□□□□□ -2.5
CD44P16070 MIR4520-1-201ENST00000582609 70 ntBASIC-0.57□□□□□ -2.5
CD44P16070 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.58□□□□□ -2.5
CD44P16070 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.6□□□□□ -2.51
CD44P16070 MIR196A1-201ENST00000388006 70 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms