Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 MIR4317-201ENST00000637586 65 ntBASIC-0.32□□□□□ -2.46
COL2A1P02458 SNORD60-201ENST00000383903 83 ntBASIC-0.33□□□□□ -2.46
COL2A1P02458 snoU83B.1-201ENST00000517136 88 ntBASIC-0.33□□□□□ -2.46
COL2A1P02458 MIR548AZ-201ENST00000616567 95 ntBASIC-0.33□□□□□ -2.46
COL2A1P02458 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.33□□□□□ -2.46
COL2A1P02458 MIR6874-201ENST00000635894 71 ntBASIC-0.33□□□□□ -2.46
COL2A1P02458 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.34□□□□□ -2.46
COL2A1P02458 SNORD114-14-201ENST00000362723 75 ntBASIC-0.35□□□□□ -2.47
COL2A1P02458 AC018880.2-201ENST00000414265 201 ntBASIC-0.35□□□□□ -2.47
COL2A1P02458 MIR6818-201ENST00000621576 65 ntBASIC-0.35□□□□□ -2.47
COL2A1P02458 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.36□□□□□ -2.47
COL2A1P02458 MIR8485-201ENST00000401372 91 ntBASIC-0.36□□□□□ -2.47
COL2A1P02458 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.38□□□□□ -2.47
COL2A1P02458 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.38□□□□□ -2.47
COL2A1P02458 MIR196A1-201ENST00000388006 70 ntBASIC-0.39□□□□□ -2.47
COL2A1P02458 MIR378F-201ENST00000578143 78 ntBASIC-0.39□□□□□ -2.47
COL2A1P02458 RNU6-164P-201ENST00000364604 103 ntBASIC-0.4□□□□□ -2.47
COL2A1P02458 SNORD115.2-201ENST00000391126 59 ntBASIC-0.4□□□□□ -2.47
COL2A1P02458 MIR548N-201ENST00000408742 75 ntBASIC-0.4□□□□□ -2.47
COL2A1P02458 AC091912.2-201ENST00000624798 167 ntBASIC-0.4□□□□□ -2.47
COL2A1P02458 Y_RNA.206-201ENST00000364136 102 ntBASIC-0.41□□□□□ -2.47
COL2A1P02458 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.41□□□□□ -2.47
COL2A1P02458 RNU6-695P-201ENST00000391157 104 ntBASIC-0.41□□□□□ -2.47
COL2A1P02458 MIR365A-201ENST00000362260 87 ntBASIC-0.41□□□□□ -2.48
COL2A1P02458 RNU6-912P-201ENST00000363800 104 ntBASIC-0.41□□□□□ -2.48
COL2A1P02458 RNU6-59P-201ENST00000384787 107 ntBASIC-0.41□□□□□ -2.48
COL2A1P02458 MIR23C-201ENST00000579846 100 ntBASIC-0.41□□□□□ -2.48
COL2A1P02458 RNU6-10P-201ENST00000384036 107 ntBASIC-0.42□□□□□ -2.48
COL2A1P02458 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.42□□□□□ -2.48
COL2A1P02458 RNU6-724P-201ENST00000390958 105 ntBASIC-0.43□□□□□ -2.48
COL2A1P02458 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.43□□□□□ -2.48
COL2A1P02458 MIR4499-201ENST00000584834 69 ntBASIC-0.43□□□□□ -2.48
COL2A1P02458 uc_338.19-201ENST00000616808 99 ntBASIC-0.43□□□□□ -2.48
COL2A1P02458 Y_RNA.382-201ENST00000365672 114 ntBASIC-0.44□□□□□ -2.48
COL2A1P02458 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.44□□□□□ -2.48
COL2A1P02458 RNU6-79P-201ENST00000362511 107 ntBASIC-0.45□□□□□ -2.48
COL2A1P02458 RNU6-176P-201ENST00000517196 105 ntBASIC-0.45□□□□□ -2.48
COL2A1P02458 RNU6-576P-201ENST00000390854 102 ntBASIC-0.46□□□□□ -2.48
COL2A1P02458 RNU6-68P-201ENST00000516576 104 ntBASIC-0.46□□□□□ -2.48
COL2A1P02458 U6.103-201ENST00000637085 61 ntBASIC-0.46□□□□□ -2.48
COL2A1P02458 MIR6738-201ENST00000619620 64 ntBASIC-0.47□□□□□ -2.48
COL2A1P02458 SNORD83B-201ENST00000386745 93 ntBASIC-0.48□□□□□ -2.49
COL2A1P02458 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.48□□□□□ -2.49
COL2A1P02458 SNORD18C-201ENST00000362704 69 ntBASIC-0.49□□□□□ -2.49
COL2A1P02458 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.49□□□□□ -2.49
COL2A1P02458 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.49□□□□□ -2.49
COL2A1P02458 MIR4441-201ENST00000582623 100 ntBASIC-0.49□□□□□ -2.49
COL2A1P02458 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.49□□□□□ -2.49
COL2A1P02458 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.5□□□□□ -2.49
COL2A1P02458 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.5□□□□□ -2.49
COL2A1P02458 RNY4P27-201ENST00000363341 96 ntBASIC-0.51□□□□□ -2.49
COL2A1P02458 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.51□□□□□ -2.49
COL2A1P02458 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.51□□□□□ -2.49
COL2A1P02458 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.52□□□□□ -2.49
COL2A1P02458 MIR4324-201ENST00000584846 72 ntBASIC-0.52□□□□□ -2.49
COL2A1P02458 AC138207.3-201ENST00000585289 166 ntBASIC-0.52□□□□□ -2.49
COL2A1P02458 MIR1285-2-201ENST00000408311 88 ntBASIC-0.53□□□□□ -2.49
COL2A1P02458 RNA5SP461-201ENST00000516451 104 ntBASIC-0.53□□□□□ -2.49
COL2A1P02458 MIR1254-1-201ENST00000408257 97 ntBASIC-0.54□□□□□ -2.5
COL2A1P02458 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.54□□□□□ -2.5
COL2A1P02458 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.55□□□□□ -2.5
COL2A1P02458 snoU13.10-201ENST00000459301 103 ntBASIC-0.55□□□□□ -2.5
COL2A1P02458 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.55□□□□□ -2.5
COL2A1P02458 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.55□□□□□ -2.5
COL2A1P02458 MIR379-201ENST00000362218 67 ntBASIC-0.56□□□□□ -2.5
COL2A1P02458 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.56□□□□□ -2.5
COL2A1P02458 SNORD111B-201ENST00000408587 80 ntBASIC-0.56□□□□□ -2.5
COL2A1P02458 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-0.56□□□□□ -2.5
COL2A1P02458 MIR548H1-201ENST00000408610 102 ntBASIC-0.58□□□□□ -2.5
COL2A1P02458 MIR4520-1-201ENST00000582609 70 ntBASIC-0.58□□□□□ -2.5
COL2A1P02458 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.59□□□□□ -2.5
COL2A1P02458 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.59□□□□□ -2.5
COL2A1P02458 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.59□□□□□ -2.5
COL2A1P02458 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.59□□□□□ -2.5
COL2A1P02458 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.59□□□□□ -2.5
COL2A1P02458 SCARNA17-201ENST00000516183 144 ntBASIC-0.6□□□□□ -2.5
COL2A1P02458 MIR548W-201ENST00000581970 74 ntBASIC-0.6□□□□□ -2.5
COL2A1P02458 MIR3123-201ENST00000583417 75 ntBASIC-0.6□□□□□ -2.5
COL2A1P02458 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-0.6□□□□□ -2.5
COL2A1P02458 RNU6-836P-201ENST00000362920 107 ntBASIC-0.61□□□□□ -2.51
COL2A1P02458 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.61□□□□□ -2.51
COL2A1P02458 FTX_4.1-201ENST00000616291 147 ntBASIC-0.61□□□□□ -2.51
COL2A1P02458 MIRLET7A2-201ENST00000362105 72 ntBASIC-0.62□□□□□ -2.51
COL2A1P02458 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.62□□□□□ -2.51
COL2A1P02458 RNU6-400P-201ENST00000391173 106 ntBASIC-0.62□□□□□ -2.51
COL2A1P02458 MIR6502-201ENST00000617296 76 ntBASIC-0.62□□□□□ -2.51
COL2A1P02458 RNA5SP180-201ENST00000516181 101 ntBASIC-0.63□□□□□ -2.51
COL2A1P02458 RNY4P7-201ENST00000364600 96 ntBASIC-0.64□□□□□ -2.51
COL2A1P02458 MIR487B-201ENST00000385021 84 ntBASIC-0.64□□□□□ -2.51
COL2A1P02458 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.64□□□□□ -2.51
COL2A1P02458 MIR3165-201ENST00000579874 75 ntBASIC-0.64□□□□□ -2.51
COL2A1P02458 Y_RNA.260-201ENST00000364628 101 ntBASIC-0.66□□□□□ -2.51
COL2A1P02458 SNORD113-3-201ENST00000364830 72 ntBASIC-0.66□□□□□ -2.51
COL2A1P02458 RNA5SP224-201ENST00000365069 126 ntBASIC-0.66□□□□□ -2.51
COL2A1P02458 SNORD45C-201ENST00000383893 79 ntBASIC-0.67□□□□□ -2.52
COL2A1P02458 RNU6-706P-201ENST00000517229 104 ntBASIC-0.67□□□□□ -2.52
COL2A1P02458 MIR3115-201ENST00000577915 68 ntBASIC-0.67□□□□□ -2.52
COL2A1P02458 Y_RNA.63-201ENST00000362841 102 ntBASIC-0.68□□□□□ -2.52
COL2A1P02458 RNU6-485P-201ENST00000363475 107 ntBASIC-0.68□□□□□ -2.52
COL2A1P02458 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms