Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.66□□□□□ -2.51
CACNA1FO60840 RNU6-742P-201ENST00000365289 107 ntBASIC-0.66□□□□□ -2.52
CACNA1FO60840 MIR4499-201ENST00000584834 69 ntBASIC-0.66□□□□□ -2.52
CACNA1FO60840 MIR4320-201ENST00000636981 65 ntBASIC-0.66□□□□□ -2.52
CACNA1FO60840 MIR379-201ENST00000362218 67 ntBASIC-0.67□□□□□ -2.52
CACNA1FO60840 MIR545-201ENST00000385085 106 ntBASIC-0.67□□□□□ -2.52
CACNA1FO60840 RNU6-141P-201ENST00000410499 105 ntBASIC-0.67□□□□□ -2.52
CACNA1FO60840 AC013734.1-201ENST00000619329 111 ntBASIC-0.68□□□□□ -2.52
CACNA1FO60840 RNU6-300P-201ENST00000459080 104 ntBASIC-0.68□□□□□ -2.52
CACNA1FO60840 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.68□□□□□ -2.52
CACNA1FO60840 SNORA17.4-201ENST00000391287 132 ntBASIC-0.69□□□□□ -2.52
CACNA1FO60840 SCARNA17-201ENST00000516183 144 ntBASIC-0.69□□□□□ -2.52
CACNA1FO60840 RNU6-79P-201ENST00000362511 107 ntBASIC-0.7□□□□□ -2.52
CACNA1FO60840 SNORD18C-201ENST00000362704 69 ntBASIC-0.7□□□□□ -2.52
CACNA1FO60840 MIR548H4-201ENST00000408689 111 ntBASIC-0.7□□□□□ -2.52
CACNA1FO60840 MIR587-201ENST00000384845 96 ntBASIC-0.71□□□□□ -2.52
CACNA1FO60840 AL500527.2-201ENST00000454105 95 ntBASIC-0.71□□□□□ -2.52
CACNA1FO60840 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.71□□□□□ -2.52
CACNA1FO60840 MIR1285-2-201ENST00000408311 88 ntBASIC-0.72□□□□□ -2.52
CACNA1FO60840 RNU6-176P-201ENST00000517196 105 ntBASIC-0.72□□□□□ -2.52
CACNA1FO60840 U4.2-201ENST00000618561 85 ntBASIC-0.72□□□□□ -2.52
CACNA1FO60840 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.72□□□□□ -2.53
CACNA1FO60840 AC138207.3-201ENST00000585289 166 ntBASIC-0.72□□□□□ -2.53
CACNA1FO60840 RNU6-695P-201ENST00000391157 104 ntBASIC-0.73□□□□□ -2.53
CACNA1FO60840 MIR6738-201ENST00000619620 64 ntBASIC-0.73□□□□□ -2.53
CACNA1FO60840 uc_338.19-201ENST00000616808 99 ntBASIC-0.74□□□□□ -2.53
CACNA1FO60840 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.75□□□□□ -2.53
CACNA1FO60840 RNU6-706P-201ENST00000517229 104 ntBASIC-0.75□□□□□ -2.53
CACNA1FO60840 MIR3165-201ENST00000579874 75 ntBASIC-0.75□□□□□ -2.53
CACNA1FO60840 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.75□□□□□ -2.53
CACNA1FO60840 RNU6-838P-201ENST00000363399 108 ntBASIC-0.77□□□□□ -2.53
CACNA1FO60840 MIR581-201ENST00000384895 96 ntBASIC-0.77□□□□□ -2.53
CACNA1FO60840 MIR8485-201ENST00000401372 91 ntBASIC-0.77□□□□□ -2.53
CACNA1FO60840 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.78□□□□□ -2.53
CACNA1FO60840 AC091912.2-201ENST00000624798 167 ntBASIC-0.78□□□□□ -2.53
CACNA1FO60840 RNA5SP461-201ENST00000516451 104 ntBASIC-0.79□□□□□ -2.54
CACNA1FO60840 RNU6-930P-201ENST00000390938 100 ntBASIC-0.8□□□□□ -2.54
CACNA1FO60840 RNU6-400P-201ENST00000391173 106 ntBASIC-0.8□□□□□ -2.54
CACNA1FO60840 MIR4520-1-201ENST00000582609 70 ntBASIC-0.8□□□□□ -2.54
CACNA1FO60840 MIR6874-201ENST00000635894 71 ntBASIC-0.8□□□□□ -2.54
CACNA1FO60840 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.81□□□□□ -2.54
CACNA1FO60840 MIR4441-201ENST00000582623 100 ntBASIC-0.81□□□□□ -2.54
CACNA1FO60840 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.82□□□□□ -2.54
CACNA1FO60840 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.83□□□□□ -2.54
CACNA1FO60840 MIR4324-201ENST00000584846 72 ntBASIC-0.84□□□□□ -2.54
CACNA1FO60840 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.84□□□□□ -2.54
CACNA1FO60840 RNU6-912P-201ENST00000363800 104 ntBASIC-0.85□□□□□ -2.55
CACNA1FO60840 HLA-S-202ENST00000425174 53 ntBASIC-0.85□□□□□ -2.55
CACNA1FO60840 RNU6-68P-201ENST00000516576 104 ntBASIC-0.85□□□□□ -2.55
CACNA1FO60840 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.86□□□□□ -2.55
CACNA1FO60840 MIR4770-201ENST00000579149 58 ntBASIC-0.86□□□□□ -2.55
CACNA1FO60840 MIR548F3-201ENST00000408509 87 ntBASIC-0.87□□□□□ -2.55
CACNA1FO60840 RNU6-986P-201ENST00000363133 102 ntBASIC-0.87□□□□□ -2.55
CACNA1FO60840 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.87□□□□□ -2.55
CACNA1FO60840 RNU6-822P-201ENST00000362707 106 ntBASIC-0.88□□□□□ -2.55
CACNA1FO60840 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.88□□□□□ -2.55
CACNA1FO60840 MIR5591-201ENST00000578248 65 ntBASIC-0.88□□□□□ -2.55
CACNA1FO60840 MIR3123-201ENST00000583417 75 ntBASIC-0.88□□□□□ -2.55
CACNA1FO60840 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.89□□□□□ -2.55
CACNA1FO60840 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.89□□□□□ -2.55
CACNA1FO60840 snoU13.10-201ENST00000459301 103 ntBASIC-0.9□□□□□ -2.55
CACNA1FO60840 Y_RNA.206-201ENST00000364136 102 ntBASIC-0.9□□□□□ -2.55
CACNA1FO60840 Y_RNA.382-201ENST00000365672 114 ntBASIC-0.9□□□□□ -2.55
CACNA1FO60840 MIR548H1-201ENST00000408610 102 ntBASIC-0.9□□□□□ -2.55
CACNA1FO60840 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.9□□□□□ -2.55
CACNA1FO60840 MIR6502-201ENST00000617296 76 ntBASIC-0.91□□□□□ -2.56
CACNA1FO60840 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.92□□□□□ -2.56
CACNA1FO60840 MIR3115-201ENST00000577915 68 ntBASIC-0.94□□□□□ -2.56
CACNA1FO60840 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.94□□□□□ -2.56
CACNA1FO60840 RNU6-841P-201ENST00000383872 107 ntBASIC-0.94□□□□□ -2.56
CACNA1FO60840 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.96□□□□□ -2.56
CACNA1FO60840 MIR548W-201ENST00000581970 74 ntBASIC-0.96□□□□□ -2.56
CACNA1FO60840 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.96□□□□□ -2.56
CACNA1FO60840 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.97□□□□□ -2.56
CACNA1FO60840 RNU6-59P-201ENST00000384787 107 ntBASIC-0.97□□□□□ -2.56
CACNA1FO60840 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.98□□□□□ -2.57
CACNA1FO60840 MIR548AM-201ENST00000584298 74 ntBASIC-0.99□□□□□ -2.57
CACNA1FO60840 RNY4P27-201ENST00000363341 96 ntBASIC-0.99□□□□□ -2.57
CACNA1FO60840 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.99□□□□□ -2.57
CACNA1FO60840 RNU6-119P-201ENST00000364882 107 ntBASIC-0.99□□□□□ -2.57
CACNA1FO60840 RNA5SP224-201ENST00000365069 126 ntBASIC-0.99□□□□□ -2.57
CACNA1FO60840 Y_RNA.320-201ENST00000365144 102 ntBASIC-1□□□□□ -2.57
CACNA1FO60840 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1□□□□□ -2.57
CACNA1FO60840 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.01□□□□□ -2.57
CACNA1FO60840 U6.103-201ENST00000637085 61 ntBASIC-1.01□□□□□ -2.57
CACNA1FO60840 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.02□□□□□ -2.57
CACNA1FO60840 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.02□□□□□ -2.57
CACNA1FO60840 RNU6-345P-201ENST00000517001 107 ntBASIC-1.03□□□□□ -2.57
CACNA1FO60840 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.03□□□□□ -2.57
CACNA1FO60840 SNORD115.2-201ENST00000391126 59 ntBASIC-1.04□□□□□ -2.58
CACNA1FO60840 SNORD113-3-201ENST00000364830 72 ntBASIC-1.05□□□□□ -2.58
CACNA1FO60840 MIR1246-201ENST00000636535 73 ntBASIC-1.07□□□□□ -2.58
CACNA1FO60840 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.07□□□□□ -2.58
CACNA1FO60840 MIR487B-201ENST00000385021 84 ntBASIC-1.07□□□□□ -2.58
CACNA1FO60840 FTX_4.1-201ENST00000616291 147 ntBASIC-1.07□□□□□ -2.58
CACNA1FO60840 RNU6-226P-201ENST00000363778 107 ntBASIC-1.08□□□□□ -2.58
CACNA1FO60840 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.08□□□□□ -2.58
CACNA1FO60840 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.08□□□□□ -2.58
CACNA1FO60840 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.08□□□□□ -2.58
CACNA1FO60840 MIR664B-201ENST00000626756 61 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 312.7 ms