Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 SNORD18C-201ENST00000362704 69 ntBASIC-0.78□□□□□ -2.53
HMX3A6NHT5 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.78□□□□□ -2.53
HMX3A6NHT5 snoU13.10-201ENST00000459301 103 ntBASIC-0.78□□□□□ -2.53
HMX3A6NHT5 RNA5SP67-201ENST00000516422 131 ntBASIC-0.78□□□□□ -2.53
HMX3A6NHT5 SNORD45.2-201ENST00000363552 72 ntBASIC-0.79□□□□□ -2.54
HMX3A6NHT5 SNORD95.1-201ENST00000364099 68 ntBASIC-0.79□□□□□ -2.54
HMX3A6NHT5 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.79□□□□□ -2.54
HMX3A6NHT5 RNU6-300P-201ENST00000459080 104 ntBASIC-0.79□□□□□ -2.54
HMX3A6NHT5 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.8□□□□□ -2.54
HMX3A6NHT5 RNU6-936P-201ENST00000384005 107 ntBASIC-0.8□□□□□ -2.54
HMX3A6NHT5 HLA-S-202ENST00000425174 53 ntBASIC-0.8□□□□□ -2.54
HMX3A6NHT5 MIR548AL-201ENST00000578416 97 ntBASIC-0.8□□□□□ -2.54
HMX3A6NHT5 MIR4770-201ENST00000579149 58 ntBASIC-0.8□□□□□ -2.54
HMX3A6NHT5 MIR548AM-201ENST00000584298 74 ntBASIC-0.8□□□□□ -2.54
HMX3A6NHT5 RNU6-912P-201ENST00000363800 104 ntBASIC-0.81□□□□□ -2.54
HMX3A6NHT5 RNU6-841P-201ENST00000383872 107 ntBASIC-0.81□□□□□ -2.54
HMX3A6NHT5 RNU6-30P-201ENST00000384561 107 ntBASIC-0.81□□□□□ -2.54
HMX3A6NHT5 MIR548H1-201ENST00000408610 102 ntBASIC-0.81□□□□□ -2.54
HMX3A6NHT5 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.81□□□□□ -2.54
HMX3A6NHT5 RNU6-986P-201ENST00000363133 102 ntBASIC-0.82□□□□□ -2.54
HMX3A6NHT5 RNU6-753P-201ENST00000363926 107 ntBASIC-0.82□□□□□ -2.54
HMX3A6NHT5 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.82□□□□□ -2.54
HMX3A6NHT5 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.82□□□□□ -2.54
HMX3A6NHT5 MIR548F3-201ENST00000408509 87 ntBASIC-0.82□□□□□ -2.54
HMX3A6NHT5 RNU6-838P-201ENST00000363399 108 ntBASIC-0.83□□□□□ -2.54
HMX3A6NHT5 RNU6-10P-201ENST00000384036 107 ntBASIC-0.83□□□□□ -2.54
HMX3A6NHT5 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.83□□□□□ -2.54
HMX3A6NHT5 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.84□□□□□ -2.54
HMX3A6NHT5 AC108019.1-201ENST00000512540 175 ntBASIC-0.84□□□□□ -2.54
HMX3A6NHT5 MIR4756-201ENST00000577874 78 ntBASIC-0.84□□□□□ -2.54
HMX3A6NHT5 SNORD113-3-201ENST00000364830 72 ntBASIC-0.85□□□□□ -2.55
HMX3A6NHT5 RNU4-88P-201ENST00000411220 86 ntBASIC-0.85□□□□□ -2.55
HMX3A6NHT5 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.86□□□□□ -2.55
HMX3A6NHT5 RNU6-614P-201ENST00000384369 107 ntBASIC-0.86□□□□□ -2.55
HMX3A6NHT5 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.86□□□□□ -2.55
HMX3A6NHT5 U6.59-201ENST00000615686 107 ntBASIC-0.86□□□□□ -2.55
HMX3A6NHT5 MIRLET7A2-201ENST00000362105 72 ntBASIC-0.88□□□□□ -2.55
HMX3A6NHT5 MIR379-201ENST00000362218 67 ntBASIC-0.88□□□□□ -2.55
HMX3A6NHT5 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.88□□□□□ -2.55
HMX3A6NHT5 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.88□□□□□ -2.55
HMX3A6NHT5 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.88□□□□□ -2.55
HMX3A6NHT5 MTND4LP19-201ENST00000403051 166 ntBASIC-0.88□□□□□ -2.55
HMX3A6NHT5 RNU6-176P-201ENST00000517196 105 ntBASIC-0.88□□□□□ -2.55
HMX3A6NHT5 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-0.88□□□□□ -2.55
HMX3A6NHT5 Y_RNA.382-201ENST00000365672 114 ntBASIC-0.89□□□□□ -2.55
HMX3A6NHT5 RNU6-808P-201ENST00000391233 108 ntBASIC-0.89□□□□□ -2.55
HMX3A6NHT5 SNORD18.1-201ENST00000363807 70 ntBASIC-0.9□□□□□ -2.55
HMX3A6NHT5 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.9□□□□□ -2.55
HMX3A6NHT5 RNU6-930P-201ENST00000390938 100 ntBASIC-0.9□□□□□ -2.55
HMX3A6NHT5 MIR3165-201ENST00000579874 75 ntBASIC-0.9□□□□□ -2.55
HMX3A6NHT5 RNU6-59P-201ENST00000384787 107 ntBASIC-0.91□□□□□ -2.56
HMX3A6NHT5 RNA5SP461-201ENST00000516451 104 ntBASIC-0.91□□□□□ -2.56
HMX3A6NHT5 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.92□□□□□ -2.56
HMX3A6NHT5 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.92□□□□□ -2.56
HMX3A6NHT5 MIR1254-1-201ENST00000408257 97 ntBASIC-0.92□□□□□ -2.56
HMX3A6NHT5 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.92□□□□□ -2.56
HMX3A6NHT5 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.93□□□□□ -2.56
HMX3A6NHT5 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.93□□□□□ -2.56
HMX3A6NHT5 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.93□□□□□ -2.56
HMX3A6NHT5 MIR545-201ENST00000385085 106 ntBASIC-0.93□□□□□ -2.56
HMX3A6NHT5 AC097484.2-201ENST00000509147 251 ntBASIC-0.93□□□□□ -2.56
HMX3A6NHT5 MIR548AX-201ENST00000580117 73 ntBASIC-0.94□□□□□ -2.56
HMX3A6NHT5 MIR664B-201ENST00000626756 61 ntBASIC-0.94□□□□□ -2.56
HMX3A6NHT5 MIR4317-201ENST00000637586 65 ntBASIC-0.94□□□□□ -2.56
HMX3A6NHT5 RNA5SP224-201ENST00000365069 126 ntBASIC-0.95□□□□□ -2.56
HMX3A6NHT5 MIR587-201ENST00000384845 96 ntBASIC-0.95□□□□□ -2.56
HMX3A6NHT5 FTX_4.1-201ENST00000616291 147 ntBASIC-0.95□□□□□ -2.56
HMX3A6NHT5 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.95□□□□□ -2.56
HMX3A6NHT5 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.96□□□□□ -2.56
HMX3A6NHT5 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.96□□□□□ -2.56
HMX3A6NHT5 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.96□□□□□ -2.56
HMX3A6NHT5 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.96□□□□□ -2.56
HMX3A6NHT5 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.96□□□□□ -2.56
HMX3A6NHT5 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.96□□□□□ -2.56
HMX3A6NHT5 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.96□□□□□ -2.56
HMX3A6NHT5 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.97□□□□□ -2.56
HMX3A6NHT5 Y_RNA.206-201ENST00000364136 102 ntBASIC-0.97□□□□□ -2.56
HMX3A6NHT5 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.97□□□□□ -2.56
HMX3A6NHT5 HAR1A.1-201ENST00000459583 118 ntBASIC-0.98□□□□□ -2.57
HMX3A6NHT5 RNU6-983P-201ENST00000516004 103 ntBASIC-0.98□□□□□ -2.57
HMX3A6NHT5 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.98□□□□□ -2.57
HMX3A6NHT5 RNU6-822P-201ENST00000362707 106 ntBASIC-0.99□□□□□ -2.57
HMX3A6NHT5 Y_RNA.63-201ENST00000362841 102 ntBASIC-0.99□□□□□ -2.57
HMX3A6NHT5 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.99□□□□□ -2.57
HMX3A6NHT5 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-0.99□□□□□ -2.57
HMX3A6NHT5 RNU6-141P-201ENST00000410499 105 ntBASIC-1□□□□□ -2.57
HMX3A6NHT5 RNA5SP476-201ENST00000516613 103 ntBASIC-1□□□□□ -2.57
HMX3A6NHT5 MIR4748-201ENST00000578076 82 ntBASIC-1□□□□□ -2.57
HMX3A6NHT5 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.01□□□□□ -2.57
HMX3A6NHT5 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.01□□□□□ -2.57
HMX3A6NHT5 RNU6-987P-201ENST00000384759 104 ntBASIC-1.01□□□□□ -2.57
HMX3A6NHT5 RNU4-37P-201ENST00000410214 84 ntBASIC-1.01□□□□□ -2.57
HMX3A6NHT5 RNU6-345P-201ENST00000517001 107 ntBASIC-1.01□□□□□ -2.57
HMX3A6NHT5 MIR1246-201ENST00000636535 73 ntBASIC-1.01□□□□□ -2.57
HMX3A6NHT5 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.02□□□□□ -2.57
HMX3A6NHT5 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.02□□□□□ -2.57
HMX3A6NHT5 RNA5SP405-201ENST00000363059 114 ntBASIC-1.03□□□□□ -2.57
HMX3A6NHT5 RNU6-854P-201ENST00000364036 107 ntBASIC-1.03□□□□□ -2.57
HMX3A6NHT5 RNU6-118P-201ENST00000516552 102 ntBASIC-1.03□□□□□ -2.57
HMX3A6NHT5 RNU6-836P-201ENST00000362920 107 ntBASIC-1.04□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 334.5 ms