Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AL353691.2-201ENST00000443795 59 ntBASIC-0.35□□□□□ -2.47
FOXD3Q9UJU5 AC021146.6-201ENST00000514659 117 ntBASIC-0.35□□□□□ -2.47
FOXD3Q9UJU5 AP000533.3-201ENST00000447704 118 ntBASIC-0.36□□□□□ -2.47
FOXD3Q9UJU5 RNA5SP169-201ENST00000517268 117 ntBASIC-0.36□□□□□ -2.47
FOXD3Q9UJU5 RNU6-247P-201ENST00000362636 107 ntBASIC-0.37□□□□□ -2.47
FOXD3Q9UJU5 RNU6-980P-201ENST00000516925 103 ntBASIC-0.37□□□□□ -2.47
FOXD3Q9UJU5 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.38□□□□□ -2.47
FOXD3Q9UJU5 SNORD14C-201ENST00000365382 88 ntBASIC-0.39□□□□□ -2.47
FOXD3Q9UJU5 SNORA32.3-201ENST00000384772 121 ntBASIC-0.39□□□□□ -2.47
FOXD3Q9UJU5 RNU4-33P-201ENST00000364316 85 ntBASIC-0.4□□□□□ -2.47
FOXD3Q9UJU5 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.4□□□□□ -2.47
FOXD3Q9UJU5 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.41□□□□□ -2.48
FOXD3Q9UJU5 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.41□□□□□ -2.48
FOXD3Q9UJU5 MIR548AX-201ENST00000580117 73 ntBASIC-0.41□□□□□ -2.48
FOXD3Q9UJU5 SNORD114-17-201ENST00000364699 75 ntBASIC-0.42□□□□□ -2.48
FOXD3Q9UJU5 RNA5SP266-201ENST00000410273 108 ntBASIC-0.42□□□□□ -2.48
FOXD3Q9UJU5 MIR5683-201ENST00000636514 76 ntBASIC-0.42□□□□□ -2.48
FOXD3Q9UJU5 SNORD45.2-201ENST00000363552 72 ntBASIC-0.43□□□□□ -2.48
FOXD3Q9UJU5 RNU6-721P-201ENST00000410155 105 ntBASIC-0.43□□□□□ -2.48
FOXD3Q9UJU5 AL451105.1-201ENST00000450005 189 ntBASIC-0.43□□□□□ -2.48
FOXD3Q9UJU5 SNORD126-201ENST00000459475 77 ntBASIC-0.43□□□□□ -2.48
FOXD3Q9UJU5 SNORD63.2-201ENST00000516303 64 ntBASIC-0.43□□□□□ -2.48
FOXD3Q9UJU5 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.44□□□□□ -2.48
FOXD3Q9UJU5 MIR548AZ-201ENST00000616567 95 ntBASIC-0.44□□□□□ -2.48
FOXD3Q9UJU5 MIR196A2-201ENST00000385189 110 ntBASIC-0.45□□□□□ -2.48
FOXD3Q9UJU5 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.46□□□□□ -2.48
FOXD3Q9UJU5 SNORD114-14-201ENST00000362723 75 ntBASIC-0.48□□□□□ -2.49
FOXD3Q9UJU5 RNU4-63P-201ENST00000411313 118 ntBASIC-0.48□□□□□ -2.49
FOXD3Q9UJU5 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.49□□□□□ -2.49
FOXD3Q9UJU5 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.49□□□□□ -2.49
FOXD3Q9UJU5 MIR520D-201ENST00000385002 87 ntBASIC-0.49□□□□□ -2.49
FOXD3Q9UJU5 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.49□□□□□ -2.49
FOXD3Q9UJU5 AP002795.1-201ENST00000534879 84 ntBASIC-0.49□□□□□ -2.49
FOXD3Q9UJU5 MT-TQ-201ENST00000387372 72 ntBASIC-0.5□□□□□ -2.49
FOXD3Q9UJU5 SNORA27.2-201ENST00000363365 126 ntBASIC-0.51□□□□□ -2.49
FOXD3Q9UJU5 MIR1468-201ENST00000410600 86 ntBASIC-0.51□□□□□ -2.49
FOXD3Q9UJU5 RNU6-284P-201ENST00000411105 106 ntBASIC-0.51□□□□□ -2.49
FOXD3Q9UJU5 RNY1P9-201ENST00000532431 109 ntBASIC-0.51□□□□□ -2.49
FOXD3Q9UJU5 RNU6-753P-201ENST00000363926 107 ntBASIC-0.53□□□□□ -2.49
FOXD3Q9UJU5 MIR3681-201ENST00000580089 72 ntBASIC-0.53□□□□□ -2.49
FOXD3Q9UJU5 RNU6-974P-201ENST00000384099 108 ntBASIC-0.54□□□□□ -2.5
FOXD3Q9UJU5 SNORA3B-201ENST00000391305 131 ntBASIC-0.54□□□□□ -2.5
FOXD3Q9UJU5 SNX3P1X-201ENST00000414887 175 ntBASIC-0.56□□□□□ -2.5
FOXD3Q9UJU5 RNU6-258P-201ENST00000390884 101 ntBASIC-0.58□□□□□ -2.5
FOXD3Q9UJU5 MIR4436A-201ENST00000585278 85 ntBASIC-0.58□□□□□ -2.5
FOXD3Q9UJU5 RNU6-608P-201ENST00000383927 104 ntBASIC-0.59□□□□□ -2.5
FOXD3Q9UJU5 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.59□□□□□ -2.5
FOXD3Q9UJU5 MIR147A-201ENST00000385079 72 ntBASIC-0.63□□□□□ -2.51
FOXD3Q9UJU5 MIR507-201ENST00000385234 94 ntBASIC-0.63□□□□□ -2.51
FOXD3Q9UJU5 RNU4-88P-201ENST00000411220 86 ntBASIC-0.64□□□□□ -2.51
FOXD3Q9UJU5 MIR4723-201ENST00000585070 81 ntBASIC-0.64□□□□□ -2.51
FOXD3Q9UJU5 RNU6-838P-201ENST00000363399 108 ntBASIC-0.65□□□□□ -2.51
FOXD3Q9UJU5 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.65□□□□□ -2.51
FOXD3Q9UJU5 MIR23C-201ENST00000579846 100 ntBASIC-0.65□□□□□ -2.51
FOXD3Q9UJU5 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.65□□□□□ -2.51
FOXD3Q9UJU5 MIR29B1-201ENST00000385015 81 ntBASIC-0.66□□□□□ -2.52
FOXD3Q9UJU5 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.66□□□□□ -2.52
FOXD3Q9UJU5 RNU6-530P-201ENST00000391180 107 ntBASIC-0.67□□□□□ -2.52
FOXD3Q9UJU5 RNU6-930P-201ENST00000390938 100 ntBASIC-0.69□□□□□ -2.52
FOXD3Q9UJU5 SCARNA17-201ENST00000516183 144 ntBASIC-0.71□□□□□ -2.52
FOXD3Q9UJU5 MIR587-201ENST00000384845 96 ntBASIC-0.72□□□□□ -2.52
FOXD3Q9UJU5 MIR548AL-201ENST00000578416 97 ntBASIC-0.72□□□□□ -2.52
FOXD3Q9UJU5 RNU6-431P-201ENST00000383874 107 ntBASIC-0.73□□□□□ -2.53
FOXD3Q9UJU5 RPL35AP4-201ENST00000412007 102 ntBASIC-0.73□□□□□ -2.53
FOXD3Q9UJU5 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.74□□□□□ -2.53
FOXD3Q9UJU5 MIR601-201ENST00000385256 79 ntBASIC-0.75□□□□□ -2.53
FOXD3Q9UJU5 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.75□□□□□ -2.53
FOXD3Q9UJU5 SNORD64-201ENST00000386683 67 ntBASIC-0.76□□□□□ -2.53
FOXD3Q9UJU5 MIR196A1-201ENST00000388006 70 ntBASIC-0.76□□□□□ -2.53
FOXD3Q9UJU5 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
FOXD3Q9UJU5 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.76□□□□□ -2.53
FOXD3Q9UJU5 MIR198-201ENST00000637333 62 ntBASIC-0.76□□□□□ -2.53
FOXD3Q9UJU5 RNA5SP26-201ENST00000362406 119 ntBASIC-0.77□□□□□ -2.53
FOXD3Q9UJU5 RNU6-361P-201ENST00000364454 107 ntBASIC-0.77□□□□□ -2.53
FOXD3Q9UJU5 MIR548F3-201ENST00000408509 87 ntBASIC-0.78□□□□□ -2.53
FOXD3Q9UJU5 AC090616.4-201ENST00000448026 115 ntBASIC-0.79□□□□□ -2.54
FOXD3Q9UJU5 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.79□□□□□ -2.54
FOXD3Q9UJU5 MIR4324-201ENST00000584846 72 ntBASIC-0.8□□□□□ -2.54
FOXD3Q9UJU5 MIR4320-201ENST00000636981 65 ntBASIC-0.8□□□□□ -2.54
FOXD3Q9UJU5 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.81□□□□□ -2.54
FOXD3Q9UJU5 RNY3P8-201ENST00000411366 126 ntBASIC-0.82□□□□□ -2.54
FOXD3Q9UJU5 snoU83B.1-201ENST00000517136 88 ntBASIC-0.82□□□□□ -2.54
FOXD3Q9UJU5 MIR6738-201ENST00000619620 64 ntBASIC-0.82□□□□□ -2.54
FOXD3Q9UJU5 MIR4426-201ENST00000640330 63 ntBASIC-0.82□□□□□ -2.54
FOXD3Q9UJU5 RNU6-10P-201ENST00000384036 107 ntBASIC-0.83□□□□□ -2.54
FOXD3Q9UJU5 MIR382-201ENST00000637119 76 ntBASIC-0.83□□□□□ -2.54
FOXD3Q9UJU5 SNORD83B-201ENST00000386745 93 ntBASIC-0.84□□□□□ -2.54
FOXD3Q9UJU5 AL500527.2-201ENST00000454105 95 ntBASIC-0.84□□□□□ -2.54
FOXD3Q9UJU5 MIR6818-201ENST00000621576 65 ntBASIC-0.84□□□□□ -2.54
FOXD3Q9UJU5 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.85□□□□□ -2.55
FOXD3Q9UJU5 RNU6-742P-201ENST00000365289 107 ntBASIC-0.85□□□□□ -2.55
FOXD3Q9UJU5 SNORD60-201ENST00000383903 83 ntBASIC-0.86□□□□□ -2.55
FOXD3Q9UJU5 SNORA17.4-201ENST00000391287 132 ntBASIC-0.86□□□□□ -2.55
FOXD3Q9UJU5 MIR202-201ENST00000362219 110 ntBASIC-0.87□□□□□ -2.55
FOXD3Q9UJU5 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.87□□□□□ -2.55
FOXD3Q9UJU5 SNORD114-25-201ENST00000363742 72 ntBASIC-0.88□□□□□ -2.55
FOXD3Q9UJU5 RNU6-176P-201ENST00000517196 105 ntBASIC-0.89□□□□□ -2.55
FOXD3Q9UJU5 MIR378F-201ENST00000578143 78 ntBASIC-0.9□□□□□ -2.55
FOXD3Q9UJU5 MIR3115-201ENST00000577915 68 ntBASIC-0.91□□□□□ -2.56
FOXD3Q9UJU5 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.91□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms