Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.82□□□□□ -2.54
SOX2P48431 SNORD64-201ENST00000386683 67 ntBASIC-0.83□□□□□ -2.54
SOX2P48431 RNU6-231P-201ENST00000517122 103 ntBASIC-0.83□□□□□ -2.54
SOX2P48431 MIR3115-201ENST00000577915 68 ntBASIC-0.83□□□□□ -2.54
SOX2P48431 MIR466-201ENST00000580653 84 ntBASIC-0.83□□□□□ -2.54
SOX2P48431 MIR7110-201ENST00000612638 86 ntBASIC-0.83□□□□□ -2.54
SOX2P48431 SNORD114-25-201ENST00000363742 72 ntBASIC-0.84□□□□□ -2.54
SOX2P48431 RNU6-669P-201ENST00000365575 107 ntBASIC-0.84□□□□□ -2.54
SOX2P48431 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.84□□□□□ -2.54
SOX2P48431 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.84□□□□□ -2.54
SOX2P48431 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.84□□□□□ -2.54
SOX2P48431 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.84□□□□□ -2.54
SOX2P48431 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.84□□□□□ -2.54
SOX2P48431 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.85□□□□□ -2.55
SOX2P48431 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.85□□□□□ -2.55
SOX2P48431 RNU7-151P-201ENST00000516930 53 ntBASIC-0.85□□□□□ -2.55
SOX2P48431 AP002795.1-201ENST00000534879 84 ntBASIC-0.85□□□□□ -2.55
SOX2P48431 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.86□□□□□ -2.55
SOX2P48431 SNORD83B-201ENST00000386745 93 ntBASIC-0.86□□□□□ -2.55
SOX2P48431 RNU7-119P-201ENST00000459279 63 ntBASIC-0.86□□□□□ -2.55
SOX2P48431 AC125388.1-201ENST00000459631 156 ntBASIC-0.86□□□□□ -2.55
SOX2P48431 MIR3938-201ENST00000582157 103 ntBASIC-0.86□□□□□ -2.55
SOX2P48431 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.87□□□□□ -2.55
SOX2P48431 MIR579-201ENST00000385221 98 ntBASIC-0.88□□□□□ -2.55
SOX2P48431 MIR507-201ENST00000385234 94 ntBASIC-0.88□□□□□ -2.55
SOX2P48431 SNORD116.2-201ENST00000391251 93 ntBASIC-0.88□□□□□ -2.55
SOX2P48431 snoU83B.1-201ENST00000517136 88 ntBASIC-0.88□□□□□ -2.55
SOX2P48431 SNORD114-3-201ENST00000364969 75 ntBASIC-0.89□□□□□ -2.55
SOX2P48431 MIR1207-201ENST00000408249 87 ntBASIC-0.89□□□□□ -2.55
SOX2P48431 MIR3170-201ENST00000582699 77 ntBASIC-0.9□□□□□ -2.55
SOX2P48431 MIR382-201ENST00000637119 76 ntBASIC-0.9□□□□□ -2.55
SOX2P48431 MIR365A-201ENST00000362260 87 ntBASIC-0.91□□□□□ -2.56
SOX2P48431 MIR1285-2-201ENST00000408311 88 ntBASIC-0.91□□□□□ -2.56
SOX2P48431 RNU7-160P-201ENST00000516660 62 ntBASIC-0.91□□□□□ -2.56
SOX2P48431 MIR7978-201ENST00000636158 59 ntBASIC-0.91□□□□□ -2.56
SOX2P48431 RNU6-247P-201ENST00000362636 107 ntBASIC-0.92□□□□□ -2.56
SOX2P48431 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.92□□□□□ -2.56
SOX2P48431 AC139453.2-201ENST00000487255 133 ntBASIC-0.92□□□□□ -2.56
SOX2P48431 MIR3165-201ENST00000579874 75 ntBASIC-0.92□□□□□ -2.56
SOX2P48431 RNU6-520P-201ENST00000384717 104 ntBASIC-0.93□□□□□ -2.56
SOX2P48431 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.93□□□□□ -2.56
SOX2P48431 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.94□□□□□ -2.56
SOX2P48431 RNU6-810P-201ENST00000364001 107 ntBASIC-0.94□□□□□ -2.56
SOX2P48431 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.94□□□□□ -2.56
SOX2P48431 SNORA40B-201ENST00000385573 128 ntBASIC-0.95□□□□□ -2.56
SOX2P48431 RNA5SP180-201ENST00000516181 101 ntBASIC-0.95□□□□□ -2.56
SOX2P48431 MIR4441-201ENST00000582623 100 ntBASIC-0.95□□□□□ -2.56
SOX2P48431 MIR520D-201ENST00000385002 87 ntBASIC-0.96□□□□□ -2.56
SOX2P48431 AL500527.2-201ENST00000454105 95 ntBASIC-0.96□□□□□ -2.56
SOX2P48431 MIR29B1-201ENST00000385015 81 ntBASIC-0.97□□□□□ -2.56
SOX2P48431 MIR125B1-201ENST00000385236 88 ntBASIC-0.97□□□□□ -2.56
SOX2P48431 RPL35AP4-201ENST00000412007 102 ntBASIC-0.98□□□□□ -2.57
SOX2P48431 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.99□□□□□ -2.57
SOX2P48431 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.99□□□□□ -2.57
SOX2P48431 SNORA40.16-201ENST00000517238 121 ntBASIC-0.99□□□□□ -2.57
SOX2P48431 RNA5SP26-201ENST00000362406 119 ntBASIC-1□□□□□ -2.57
SOX2P48431 Y_RNA.69-201ENST00000362885 109 ntBASIC-1□□□□□ -2.57
SOX2P48431 RNU6-828P-201ENST00000364876 107 ntBASIC-1□□□□□ -2.57
SOX2P48431 SNORD63.2-201ENST00000516303 64 ntBASIC-1□□□□□ -2.57
SOX2P48431 RNU6-608P-201ENST00000383927 104 ntBASIC-1.01□□□□□ -2.57
SOX2P48431 MIR4499-201ENST00000584834 69 ntBASIC-1.01□□□□□ -2.57
SOX2P48431 MIR6818-201ENST00000621576 65 ntBASIC-1.01□□□□□ -2.57
SOX2P48431 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.02□□□□□ -2.57
SOX2P48431 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.02□□□□□ -2.57
SOX2P48431 RNY4P27-201ENST00000363341 96 ntBASIC-1.03□□□□□ -2.57
SOX2P48431 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.03□□□□□ -2.57
SOX2P48431 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.03□□□□□ -2.57
SOX2P48431 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.04□□□□□ -2.58
SOX2P48431 uc_338.19-201ENST00000616808 99 ntBASIC-1.04□□□□□ -2.58
SOX2P48431 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.05□□□□□ -2.58
SOX2P48431 AC090616.4-201ENST00000448026 115 ntBASIC-1.05□□□□□ -2.58
SOX2P48431 SNORA27.2-201ENST00000363365 126 ntBASIC-1.06□□□□□ -2.58
SOX2P48431 MIR23C-201ENST00000579846 100 ntBASIC-1.06□□□□□ -2.58
SOX2P48431 RNU6-258P-201ENST00000390884 101 ntBASIC-1.07□□□□□ -2.58
SOX2P48431 RNU6-788P-201ENST00000390967 104 ntBASIC-1.07□□□□□ -2.58
SOX2P48431 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.07□□□□□ -2.58
SOX2P48431 RNU6-576P-201ENST00000390854 102 ntBASIC-1.08□□□□□ -2.58
SOX2P48431 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.09□□□□□ -2.58
SOX2P48431 MIR1246-201ENST00000636535 73 ntBASIC-1.09□□□□□ -2.58
SOX2P48431 MIR633-201ENST00000384821 98 ntBASIC-1.1□□□□□ -2.59
SOX2P48431 MIR4306-201ENST00000583390 91 ntBASIC-1.1□□□□□ -2.59
SOX2P48431 RNU6-164P-201ENST00000364604 103 ntBASIC-1.11□□□□□ -2.59
SOX2P48431 RNU6-974P-201ENST00000384099 108 ntBASIC-1.11□□□□□ -2.59
SOX2P48431 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.11□□□□□ -2.59
SOX2P48431 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
SOX2P48431 RNU6-446P-201ENST00000362827 106 ntBASIC-1.13□□□□□ -2.59
SOX2P48431 SNORD45.2-201ENST00000363552 72 ntBASIC-1.14□□□□□ -2.59
SOX2P48431 AC018880.2-201ENST00000414265 201 ntBASIC-1.14□□□□□ -2.59
SOX2P48431 RNU6-829P-201ENST00000363700 112 ntBASIC-1.16□□□□□ -2.6
SOX2P48431 RNU6-226P-201ENST00000363778 107 ntBASIC-1.16□□□□□ -2.6
SOX2P48431 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.17□□□□□ -2.6
SOX2P48431 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.17□□□□□ -2.6
SOX2P48431 RNU7-134P-201ENST00000458997 64 ntBASIC-1.17□□□□□ -2.6
SOX2P48431 RNU6-706P-201ENST00000517229 104 ntBASIC-1.17□□□□□ -2.6
SOX2P48431 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.18□□□□□ -2.6
SOX2P48431 RNU6-499P-201ENST00000365615 107 ntBASIC-1.18□□□□□ -2.6
SOX2P48431 AL451105.1-201ENST00000450005 189 ntBASIC-1.18□□□□□ -2.6
SOX2P48431 RNU6-419P-201ENST00000517030 63 ntBASIC-1.18□□□□□ -2.6
SOX2P48431 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.19□□□□□ -2.6
SOX2P48431 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 195.6 ms