Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 SNORD63.2-201ENST00000516303 64 ntBASIC-0.18□□□□□ -2.44
LIG1P18858 SNORD45.2-201ENST00000363552 72 ntBASIC-0.19□□□□□ -2.44
LIG1P18858 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.19□□□□□ -2.44
LIG1P18858 RNU6-974P-201ENST00000384099 108 ntBASIC-0.19□□□□□ -2.44
LIG1P18858 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.19□□□□□ -2.44
LIG1P18858 MIR3179-1-201ENST00000578940 84 ntBASIC-0.19□□□□□ -2.44
LIG1P18858 MIR3179-2-201ENST00000579107 84 ntBASIC-0.19□□□□□ -2.44
LIG1P18858 MIR3179-3-201ENST00000579566 84 ntBASIC-0.19□□□□□ -2.44
LIG1P18858 MIR3179-4-201ENST00000617599 84 ntBASIC-0.19□□□□□ -2.44
LIG1P18858 AL353691.2-201ENST00000443795 59 ntBASIC-0.2□□□□□ -2.44
LIG1P18858 MIR409-201ENST00000362237 79 ntBASIC-0.21□□□□□ -2.44
LIG1P18858 SNORD114-11-201ENST00000363738 75 ntBASIC-0.21□□□□□ -2.44
LIG1P18858 RNA5SP331-201ENST00000364986 107 ntBASIC-0.21□□□□□ -2.44
LIG1P18858 RNA5SP451-201ENST00000410588 110 ntBASIC-0.21□□□□□ -2.44
LIG1P18858 MIR520D-201ENST00000385002 87 ntBASIC-0.22□□□□□ -2.44
LIG1P18858 RNA5SP169-201ENST00000517268 117 ntBASIC-0.22□□□□□ -2.44
LIG1P18858 AP002795.1-201ENST00000534879 84 ntBASIC-0.22□□□□□ -2.44
LIG1P18858 SNORD95.1-201ENST00000364099 68 ntBASIC-0.23□□□□□ -2.45
LIG1P18858 AP000533.3-201ENST00000447704 118 ntBASIC-0.23□□□□□ -2.45
LIG1P18858 MIR3681-201ENST00000580089 72 ntBASIC-0.23□□□□□ -2.45
LIG1P18858 MIR5683-201ENST00000636514 76 ntBASIC-0.23□□□□□ -2.45
LIG1P18858 RNU6-838P-201ENST00000363399 108 ntBASIC-0.24□□□□□ -2.45
LIG1P18858 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.25□□□□□ -2.45
LIG1P18858 RNU6-930P-201ENST00000390938 100 ntBASIC-0.25□□□□□ -2.45
LIG1P18858 SNORD114-17-201ENST00000364699 75 ntBASIC-0.26□□□□□ -2.45
LIG1P18858 MIR1468-201ENST00000410600 86 ntBASIC-0.26□□□□□ -2.45
LIG1P18858 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.26□□□□□ -2.45
LIG1P18858 RNY1P9-201ENST00000532431 109 ntBASIC-0.26□□□□□ -2.45
LIG1P18858 SNORA27.2-201ENST00000363365 126 ntBASIC-0.27□□□□□ -2.45
LIG1P18858 RNU6-258P-201ENST00000390884 101 ntBASIC-0.27□□□□□ -2.45
LIG1P18858 RNU6-721P-201ENST00000410155 105 ntBASIC-0.27□□□□□ -2.45
LIG1P18858 RNA5SP275-201ENST00000363936 118 ntBASIC-0.28□□□□□ -2.45
LIG1P18858 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.29□□□□□ -2.46
LIG1P18858 SNORA32.3-201ENST00000384772 121 ntBASIC-0.29□□□□□ -2.46
LIG1P18858 RNU6-320P-201ENST00000516511 106 ntBASIC-0.29□□□□□ -2.46
LIG1P18858 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.29□□□□□ -2.46
LIG1P18858 MIR548F3-201ENST00000408509 87 ntBASIC-0.3□□□□□ -2.46
LIG1P18858 AC021146.6-201ENST00000514659 117 ntBASIC-0.3□□□□□ -2.46
LIG1P18858 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.3□□□□□ -2.46
LIG1P18858 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.32□□□□□ -2.46
LIG1P18858 MIR29B1-201ENST00000385015 81 ntBASIC-0.32□□□□□ -2.46
LIG1P18858 RNU6-608P-201ENST00000383927 104 ntBASIC-0.33□□□□□ -2.46
LIG1P18858 MIR548AX-201ENST00000580117 73 ntBASIC-0.33□□□□□ -2.46
LIG1P18858 MIR548AZ-201ENST00000616567 95 ntBASIC-0.33□□□□□ -2.46
LIG1P18858 MIR548AL-201ENST00000578416 97 ntBASIC-0.34□□□□□ -2.46
LIG1P18858 SNORD14C-201ENST00000365382 88 ntBASIC-0.37□□□□□ -2.47
LIG1P18858 RNU6-530P-201ENST00000391180 107 ntBASIC-0.37□□□□□ -2.47
LIG1P18858 SNX3P1X-201ENST00000414887 175 ntBASIC-0.37□□□□□ -2.47
LIG1P18858 U4.2-201ENST00000618561 85 ntBASIC-0.38□□□□□ -2.47
LIG1P18858 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.39□□□□□ -2.47
LIG1P18858 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.39□□□□□ -2.47
LIG1P18858 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.39□□□□□ -2.47
LIG1P18858 SNORD114-14-201ENST00000362723 75 ntBASIC-0.4□□□□□ -2.47
LIG1P18858 MIR4320-201ENST00000636981 65 ntBASIC-0.4□□□□□ -2.47
LIG1P18858 SNORD126-201ENST00000459475 77 ntBASIC-0.42□□□□□ -2.48
LIG1P18858 MIR196A2-201ENST00000385189 110 ntBASIC-0.44□□□□□ -2.48
LIG1P18858 MIR507-201ENST00000385234 94 ntBASIC-0.44□□□□□ -2.48
LIG1P18858 MT-TQ-201ENST00000387372 72 ntBASIC-0.44□□□□□ -2.48
LIG1P18858 MIR4723-201ENST00000585070 81 ntBASIC-0.44□□□□□ -2.48
LIG1P18858 MIR587-201ENST00000384845 96 ntBASIC-0.45□□□□□ -2.48
LIG1P18858 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.45□□□□□ -2.48
LIG1P18858 SNORA3B-201ENST00000391305 131 ntBASIC-0.45□□□□□ -2.48
LIG1P18858 RNU6-361P-201ENST00000364454 107 ntBASIC-0.46□□□□□ -2.48
LIG1P18858 MIR23C-201ENST00000579846 100 ntBASIC-0.46□□□□□ -2.48
LIG1P18858 RNU6-742P-201ENST00000365289 107 ntBASIC-0.47□□□□□ -2.48
LIG1P18858 MIR147A-201ENST00000385079 72 ntBASIC-0.47□□□□□ -2.48
LIG1P18858 RNU6-284P-201ENST00000411105 106 ntBASIC-0.47□□□□□ -2.48
LIG1P18858 SCARNA17-201ENST00000516183 144 ntBASIC-0.47□□□□□ -2.48
LIG1P18858 MIR601-201ENST00000385256 79 ntBASIC-0.48□□□□□ -2.49
LIG1P18858 RPL35AP4-201ENST00000412007 102 ntBASIC-0.48□□□□□ -2.49
LIG1P18858 MIR4324-201ENST00000584846 72 ntBASIC-0.48□□□□□ -2.49
LIG1P18858 RNU6-10P-201ENST00000384036 107 ntBASIC-0.49□□□□□ -2.49
LIG1P18858 RNA5SP461-201ENST00000516451 104 ntBASIC-0.49□□□□□ -2.49
LIG1P18858 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.5□□□□□ -2.49
LIG1P18858 MIR545-201ENST00000385085 106 ntBASIC-0.5□□□□□ -2.49
LIG1P18858 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.5□□□□□ -2.49
LIG1P18858 MIR6738-201ENST00000619620 64 ntBASIC-0.5□□□□□ -2.49
LIG1P18858 RNA5SP26-201ENST00000362406 119 ntBASIC-0.52□□□□□ -2.49
LIG1P18858 RNU6-431P-201ENST00000383874 107 ntBASIC-0.52□□□□□ -2.49
LIG1P18858 RNY3P8-201ENST00000411366 126 ntBASIC-0.52□□□□□ -2.49
LIG1P18858 MIR4436A-201ENST00000585278 85 ntBASIC-0.52□□□□□ -2.49
LIG1P18858 AC090616.4-201ENST00000448026 115 ntBASIC-0.53□□□□□ -2.49
LIG1P18858 MIR4426-201ENST00000640330 63 ntBASIC-0.53□□□□□ -2.49
LIG1P18858 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.54□□□□□ -2.5
LIG1P18858 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.54□□□□□ -2.5
LIG1P18858 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.54□□□□□ -2.5
LIG1P18858 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.54□□□□□ -2.5
LIG1P18858 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.54□□□□□ -2.5
LIG1P18858 SNORA17.4-201ENST00000391287 132 ntBASIC-0.56□□□□□ -2.5
LIG1P18858 MIR202-201ENST00000362219 110 ntBASIC-0.57□□□□□ -2.5
LIG1P18858 SNORD64-201ENST00000386683 67 ntBASIC-0.57□□□□□ -2.5
LIG1P18858 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.58□□□□□ -2.5
LIG1P18858 MIR3115-201ENST00000577915 68 ntBASIC-0.58□□□□□ -2.5
LIG1P18858 RNU6-986P-201ENST00000363133 102 ntBASIC-0.59□□□□□ -2.5
LIG1P18858 MIR198-201ENST00000637333 62 ntBASIC-0.59□□□□□ -2.5
LIG1P18858 SNORD60-201ENST00000383903 83 ntBASIC-0.6□□□□□ -2.51
LIG1P18858 MIR548H4-201ENST00000408689 111 ntBASIC-0.6□□□□□ -2.51
LIG1P18858 RNU6-176P-201ENST00000517196 105 ntBASIC-0.6□□□□□ -2.51
LIG1P18858 RNU6-300P-201ENST00000459080 104 ntBASIC-0.62□□□□□ -2.51
LIG1P18858 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 241.1 ms