Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.29□□□□□ -2.46
SYPP08247 SNORD114-15-201ENST00000364687 72 ntBASIC-0.3□□□□□ -2.46
SYPP08247 RNU6-721P-201ENST00000410155 105 ntBASIC-0.3□□□□□ -2.46
SYPP08247 AL353691.2-201ENST00000443795 59 ntBASIC-0.3□□□□□ -2.46
SYPP08247 AP002795.1-201ENST00000534879 84 ntBASIC-0.3□□□□□ -2.46
SYPP08247 RNU6-247P-201ENST00000362636 107 ntBASIC-0.31□□□□□ -2.46
SYPP08247 SNORD114-17-201ENST00000364699 75 ntBASIC-0.31□□□□□ -2.46
SYPP08247 RNU4-63P-201ENST00000411313 118 ntBASIC-0.31□□□□□ -2.46
SYPP08247 SNORD63.2-201ENST00000516303 64 ntBASIC-0.31□□□□□ -2.46
SYPP08247 MIR548AZ-201ENST00000616567 95 ntBASIC-0.31□□□□□ -2.46
SYPP08247 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.32□□□□□ -2.46
SYPP08247 RNU6-974P-201ENST00000384099 108 ntBASIC-0.32□□□□□ -2.46
SYPP08247 MIR520D-201ENST00000385002 87 ntBASIC-0.32□□□□□ -2.46
SYPP08247 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.32□□□□□ -2.46
SYPP08247 RNA5SP67-201ENST00000516422 131 ntBASIC-0.32□□□□□ -2.46
SYPP08247 SNORD14C-201ENST00000365382 88 ntBASIC-0.33□□□□□ -2.46
SYPP08247 MIR5683-201ENST00000636514 76 ntBASIC-0.34□□□□□ -2.46
SYPP08247 AL451105.1-201ENST00000450005 189 ntBASIC-0.35□□□□□ -2.47
SYPP08247 SNORD126-201ENST00000459475 77 ntBASIC-0.35□□□□□ -2.47
SYPP08247 AL627230.5-201ENST00000619807 58 ntBASIC-0.35□□□□□ -2.47
SYPP08247 RNU6-753P-201ENST00000363926 107 ntBASIC-0.36□□□□□ -2.47
SYPP08247 RNU6-258P-201ENST00000390884 101 ntBASIC-0.37□□□□□ -2.47
SYPP08247 AC021146.6-201ENST00000514659 117 ntBASIC-0.37□□□□□ -2.47
SYPP08247 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.38□□□□□ -2.47
SYPP08247 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.38□□□□□ -2.47
SYPP08247 MIR548AX-201ENST00000580117 73 ntBASIC-0.38□□□□□ -2.47
SYPP08247 MIR409-201ENST00000362237 79 ntBASIC-0.39□□□□□ -2.47
SYPP08247 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.39□□□□□ -2.47
SYPP08247 MT-TQ-201ENST00000387372 72 ntBASIC-0.39□□□□□ -2.47
SYPP08247 MIR3681-201ENST00000580089 72 ntBASIC-0.39□□□□□ -2.47
SYPP08247 MIR196A2-201ENST00000385189 110 ntBASIC-0.4□□□□□ -2.47
SYPP08247 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.41□□□□□ -2.48
SYPP08247 RNA5SP266-201ENST00000410273 108 ntBASIC-0.42□□□□□ -2.48
SYPP08247 RNU6-284P-201ENST00000411105 106 ntBASIC-0.42□□□□□ -2.48
SYPP08247 SNORD45.2-201ENST00000363552 72 ntBASIC-0.43□□□□□ -2.48
SYPP08247 RNU6-608P-201ENST00000383927 104 ntBASIC-0.43□□□□□ -2.48
SYPP08247 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.43□□□□□ -2.48
SYPP08247 MIR1468-201ENST00000410600 86 ntBASIC-0.43□□□□□ -2.48
SYPP08247 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.43□□□□□ -2.48
SYPP08247 SNORA27.2-201ENST00000363365 126 ntBASIC-0.44□□□□□ -2.48
SYPP08247 RNU4-88P-201ENST00000411220 86 ntBASIC-0.44□□□□□ -2.48
SYPP08247 RNY1P9-201ENST00000532431 109 ntBASIC-0.44□□□□□ -2.48
SYPP08247 SNORD114-14-201ENST00000362723 75 ntBASIC-0.45□□□□□ -2.48
SYPP08247 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.45□□□□□ -2.48
SYPP08247 SNORA3B-201ENST00000391305 131 ntBASIC-0.45□□□□□ -2.48
SYPP08247 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.45□□□□□ -2.48
SYPP08247 RNA5SP331-201ENST00000364986 107 ntBASIC-0.47□□□□□ -2.48
SYPP08247 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.47□□□□□ -2.48
SYPP08247 MIR587-201ENST00000384845 96 ntBASIC-0.49□□□□□ -2.49
SYPP08247 MIR29B1-201ENST00000385015 81 ntBASIC-0.5□□□□□ -2.49
SYPP08247 SCARNA17-201ENST00000516183 144 ntBASIC-0.5□□□□□ -2.49
SYPP08247 MIR507-201ENST00000385234 94 ntBASIC-0.51□□□□□ -2.49
SYPP08247 MIR4436A-201ENST00000585278 85 ntBASIC-0.51□□□□□ -2.49
SYPP08247 RNU6-838P-201ENST00000363399 108 ntBASIC-0.52□□□□□ -2.49
SYPP08247 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.52□□□□□ -2.49
SYPP08247 MIR4320-201ENST00000636981 65 ntBASIC-0.52□□□□□ -2.49
SYPP08247 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.53□□□□□ -2.49
SYPP08247 MIR147A-201ENST00000385079 72 ntBASIC-0.53□□□□□ -2.49
SYPP08247 RNU6-930P-201ENST00000390938 100 ntBASIC-0.53□□□□□ -2.49
SYPP08247 RNU6-530P-201ENST00000391180 107 ntBASIC-0.53□□□□□ -2.49
SYPP08247 RPL35AP4-201ENST00000412007 102 ntBASIC-0.53□□□□□ -2.49
SYPP08247 MIR6738-201ENST00000619620 64 ntBASIC-0.53□□□□□ -2.49
SYPP08247 RNU6-10P-201ENST00000384036 107 ntBASIC-0.54□□□□□ -2.5
SYPP08247 SNX3P1X-201ENST00000414887 175 ntBASIC-0.54□□□□□ -2.5
SYPP08247 MIR4324-201ENST00000584846 72 ntBASIC-0.55□□□□□ -2.5
SYPP08247 RNU6-431P-201ENST00000383874 107 ntBASIC-0.56□□□□□ -2.5
SYPP08247 MIR548F3-201ENST00000408509 87 ntBASIC-0.57□□□□□ -2.5
SYPP08247 MIR548AL-201ENST00000578416 97 ntBASIC-0.58□□□□□ -2.5
SYPP08247 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.58□□□□□ -2.5
SYPP08247 RNA5SP26-201ENST00000362406 119 ntBASIC-0.59□□□□□ -2.5
SYPP08247 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.59□□□□□ -2.5
SYPP08247 SNORD64-201ENST00000386683 67 ntBASIC-0.6□□□□□ -2.51
SYPP08247 MIR196A1-201ENST00000388006 70 ntBASIC-0.61□□□□□ -2.51
SYPP08247 AC090616.4-201ENST00000448026 115 ntBASIC-0.61□□□□□ -2.51
SYPP08247 RNU6-742P-201ENST00000365289 107 ntBASIC-0.62□□□□□ -2.51
SYPP08247 MIR601-201ENST00000385256 79 ntBASIC-0.62□□□□□ -2.51
SYPP08247 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
SYPP08247 RNY3P8-201ENST00000411366 126 ntBASIC-0.62□□□□□ -2.51
SYPP08247 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.62□□□□□ -2.51
SYPP08247 MIR198-201ENST00000637333 62 ntBASIC-0.62□□□□□ -2.51
SYPP08247 MIR23C-201ENST00000579846 100 ntBASIC-0.63□□□□□ -2.51
SYPP08247 RNU6-361P-201ENST00000364454 107 ntBASIC-0.64□□□□□ -2.51
SYPP08247 MIR3115-201ENST00000577915 68 ntBASIC-0.64□□□□□ -2.51
SYPP08247 U4.2-201ENST00000618561 85 ntBASIC-0.64□□□□□ -2.51
SYPP08247 SNORD83B-201ENST00000386745 93 ntBASIC-0.65□□□□□ -2.51
SYPP08247 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.66□□□□□ -2.52
SYPP08247 RNA5SP461-201ENST00000516451 104 ntBASIC-0.67□□□□□ -2.52
SYPP08247 MIR4426-201ENST00000640330 63 ntBASIC-0.67□□□□□ -2.52
SYPP08247 MIR202-201ENST00000362219 110 ntBASIC-0.68□□□□□ -2.52
SYPP08247 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.68□□□□□ -2.52
SYPP08247 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.68□□□□□ -2.52
SYPP08247 MIR378F-201ENST00000578143 78 ntBASIC-0.68□□□□□ -2.52
SYPP08247 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.68□□□□□ -2.52
SYPP08247 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.68□□□□□ -2.52
SYPP08247 MIR382-201ENST00000637119 76 ntBASIC-0.68□□□□□ -2.52
SYPP08247 SNORD114-25-201ENST00000363742 72 ntBASIC-0.69□□□□□ -2.52
SYPP08247 MIR4723-201ENST00000585070 81 ntBASIC-0.69□□□□□ -2.52
SYPP08247 MIR6818-201ENST00000621576 65 ntBASIC-0.69□□□□□ -2.52
SYPP08247 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.71□□□□□ -2.52
SYPP08247 RNA5SP180-201ENST00000516181 101 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 201.9 ms