Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 SNORD19-201ENST00000391191 68 ntBASIC-0.83□□□□□ -2.54
PRPF40AO75400 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.83□□□□□ -2.54
PRPF40AO75400 RNU6-810P-201ENST00000364001 107 ntBASIC-0.84□□□□□ -2.54
PRPF40AO75400 AP002795.1-201ENST00000534879 84 ntBASIC-0.84□□□□□ -2.54
PRPF40AO75400 AL627230.5-201ENST00000619807 58 ntBASIC-0.84□□□□□ -2.54
PRPF40AO75400 MIR633-201ENST00000384821 98 ntBASIC-0.85□□□□□ -2.55
PRPF40AO75400 MIR6738-201ENST00000619620 64 ntBASIC-0.85□□□□□ -2.55
PRPF40AO75400 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.86□□□□□ -2.55
PRPF40AO75400 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.86□□□□□ -2.55
PRPF40AO75400 MIR5683-201ENST00000636514 76 ntBASIC-0.86□□□□□ -2.55
PRPF40AO75400 RNA5SP331-201ENST00000364986 107 ntBASIC-0.87□□□□□ -2.55
PRPF40AO75400 RNU6-10P-201ENST00000384036 107 ntBASIC-0.87□□□□□ -2.55
PRPF40AO75400 SNORA40B-201ENST00000385573 128 ntBASIC-0.87□□□□□ -2.55
PRPF40AO75400 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.87□□□□□ -2.55
PRPF40AO75400 RNU7-160P-201ENST00000516660 62 ntBASIC-0.87□□□□□ -2.55
PRPF40AO75400 MIR4324-201ENST00000584846 72 ntBASIC-0.87□□□□□ -2.55
PRPF40AO75400 MIR382-201ENST00000637119 76 ntBASIC-0.87□□□□□ -2.55
PRPF40AO75400 MIR196A1-201ENST00000388006 70 ntBASIC-0.88□□□□□ -2.55
PRPF40AO75400 MIR4490-201ENST00000582647 84 ntBASIC-0.88□□□□□ -2.55
PRPF40AO75400 RNU6-247P-201ENST00000362636 107 ntBASIC-0.89□□□□□ -2.55
PRPF40AO75400 MIR7978-201ENST00000636158 59 ntBASIC-0.89□□□□□ -2.55
PRPF40AO75400 MIR4320-201ENST00000636981 65 ntBASIC-0.89□□□□□ -2.55
PRPF40AO75400 SNORA40.16-201ENST00000517238 121 ntBASIC-0.91□□□□□ -2.56
PRPF40AO75400 MIR3170-201ENST00000582699 77 ntBASIC-0.91□□□□□ -2.56
PRPF40AO75400 RNU6-499P-201ENST00000365615 107 ntBASIC-0.92□□□□□ -2.56
PRPF40AO75400 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.94□□□□□ -2.56
PRPF40AO75400 SNX3P1X-201ENST00000414887 175 ntBASIC-0.95□□□□□ -2.56
PRPF40AO75400 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.95□□□□□ -2.56
PRPF40AO75400 MIR507-201ENST00000385234 94 ntBASIC-0.96□□□□□ -2.56
PRPF40AO75400 SNORD83B-201ENST00000386745 93 ntBASIC-0.96□□□□□ -2.56
PRPF40AO75400 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.97□□□□□ -2.56
PRPF40AO75400 RNU6-829P-201ENST00000363700 112 ntBASIC-0.97□□□□□ -2.56
PRPF40AO75400 snoU83B.1-201ENST00000517136 88 ntBASIC-0.97□□□□□ -2.56
PRPF40AO75400 MIR4499-201ENST00000584834 69 ntBASIC-0.97□□□□□ -2.56
PRPF40AO75400 uc_338.19-201ENST00000616808 99 ntBASIC-0.97□□□□□ -2.56
PRPF40AO75400 RNU6-446P-201ENST00000362827 106 ntBASIC-0.98□□□□□ -2.57
PRPF40AO75400 MIR125B1-201ENST00000385236 88 ntBASIC-0.98□□□□□ -2.57
PRPF40AO75400 RPL35AP4-201ENST00000412007 102 ntBASIC-0.98□□□□□ -2.57
PRPF40AO75400 AC079150.2-201ENST00000443733 78 ntBASIC-0.98□□□□□ -2.57
PRPF40AO75400 RNU7-134P-201ENST00000458997 64 ntBASIC-0.98□□□□□ -2.57
PRPF40AO75400 RNA5SP26-201ENST00000362406 119 ntBASIC-0.99□□□□□ -2.57
PRPF40AO75400 RNU6-828P-201ENST00000364876 107 ntBASIC-0.99□□□□□ -2.57
PRPF40AO75400 RNU6-1157P-201ENST00000384456 106 ntBASIC-1□□□□□ -2.57
PRPF40AO75400 MIR1468-201ENST00000410600 86 ntBASIC-1□□□□□ -2.57
PRPF40AO75400 SNORD63.2-201ENST00000516303 64 ntBASIC-1□□□□□ -2.57
PRPF40AO75400 MIR520D-201ENST00000385002 87 ntBASIC-1.02□□□□□ -2.57
PRPF40AO75400 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.03□□□□□ -2.57
PRPF40AO75400 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.03□□□□□ -2.57
PRPF40AO75400 MIR3115-201ENST00000577915 68 ntBASIC-1.03□□□□□ -2.57
PRPF40AO75400 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.04□□□□□ -2.58
PRPF40AO75400 MIR601-201ENST00000385256 79 ntBASIC-1.04□□□□□ -2.58
PRPF40AO75400 MIR6818-201ENST00000621576 65 ntBASIC-1.04□□□□□ -2.58
PRPF40AO75400 MIR198-201ENST00000637333 62 ntBASIC-1.04□□□□□ -2.58
PRPF40AO75400 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.06□□□□□ -2.58
PRPF40AO75400 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.07□□□□□ -2.58
PRPF40AO75400 MIR378F-201ENST00000578143 78 ntBASIC-1.07□□□□□ -2.58
PRPF40AO75400 MIR3165-201ENST00000579874 75 ntBASIC-1.07□□□□□ -2.58
PRPF40AO75400 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
PRPF40AO75400 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.08□□□□□ -2.58
PRPF40AO75400 RNU6-608P-201ENST00000383927 104 ntBASIC-1.09□□□□□ -2.58
PRPF40AO75400 MIR29B1-201ENST00000385015 81 ntBASIC-1.09□□□□□ -2.58
PRPF40AO75400 AC090616.4-201ENST00000448026 115 ntBASIC-1.09□□□□□ -2.58
PRPF40AO75400 RNA5SP461-201ENST00000516451 104 ntBASIC-1.09□□□□□ -2.58
PRPF40AO75400 RNU6-258P-201ENST00000390884 101 ntBASIC-1.13□□□□□ -2.59
PRPF40AO75400 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.13□□□□□ -2.59
PRPF40AO75400 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.13□□□□□ -2.59
PRPF40AO75400 U4.2-201ENST00000618561 85 ntBASIC-1.14□□□□□ -2.59
PRPF40AO75400 SNORA27.2-201ENST00000363365 126 ntBASIC-1.15□□□□□ -2.59
PRPF40AO75400 SNORD113-4-201ENST00000364802 75 ntBASIC-1.15□□□□□ -2.59
PRPF40AO75400 RNA5SP180-201ENST00000516181 101 ntBASIC-1.15□□□□□ -2.59
PRPF40AO75400 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.16□□□□□ -2.6
PRPF40AO75400 MIR8485-201ENST00000401372 91 ntBASIC-1.16□□□□□ -2.6
PRPF40AO75400 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.16□□□□□ -2.6
PRPF40AO75400 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.16□□□□□ -2.6
PRPF40AO75400 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.16□□□□□ -2.6
PRPF40AO75400 MIR6874-201ENST00000635894 71 ntBASIC-1.16□□□□□ -2.6
PRPF40AO75400 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.16□□□□□ -2.6
PRPF40AO75400 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.17□□□□□ -2.6
PRPF40AO75400 MIR4306-201ENST00000583390 91 ntBASIC-1.17□□□□□ -2.6
PRPF40AO75400 SNORD45.2-201ENST00000363552 72 ntBASIC-1.18□□□□□ -2.6
PRPF40AO75400 RNU6-164P-201ENST00000364604 103 ntBASIC-1.18□□□□□ -2.6
PRPF40AO75400 RNU6-974P-201ENST00000384099 108 ntBASIC-1.18□□□□□ -2.6
PRPF40AO75400 RNU6-576P-201ENST00000390854 102 ntBASIC-1.18□□□□□ -2.6
PRPF40AO75400 AC091912.2-201ENST00000624798 167 ntBASIC-1.18□□□□□ -2.6
PRPF40AO75400 RNU6-419P-201ENST00000517030 63 ntBASIC-1.19□□□□□ -2.6
PRPF40AO75400 RNU6-614P-201ENST00000384369 107 ntBASIC-1.2□□□□□ -2.6
PRPF40AO75400 U6.59-201ENST00000615686 107 ntBASIC-1.2□□□□□ -2.6
PRPF40AO75400 MIR365A-201ENST00000362260 87 ntBASIC-1.21□□□□□ -2.6
PRPF40AO75400 MIR1285-2-201ENST00000408311 88 ntBASIC-1.21□□□□□ -2.6
PRPF40AO75400 MIR548X-201ENST00000580069 75 ntBASIC-1.21□□□□□ -2.6
PRPF40AO75400 AL451105.1-201ENST00000450005 189 ntBASIC-1.22□□□□□ -2.6
PRPF40AO75400 MIR4723-201ENST00000585070 81 ntBASIC-1.22□□□□□ -2.6
PRPF40AO75400 MIR23C-201ENST00000579846 100 ntBASIC-1.23□□□□□ -2.61
PRPF40AO75400 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.24□□□□□ -2.61
PRPF40AO75400 MIR4441-201ENST00000582623 100 ntBASIC-1.24□□□□□ -2.61
PRPF40AO75400 MTND4LP19-201ENST00000403051 166 ntBASIC-1.26□□□□□ -2.61
PRPF40AO75400 AC018880.2-201ENST00000414265 201 ntBASIC-1.26□□□□□ -2.61
PRPF40AO75400 RNU6-563P-201ENST00000364872 108 ntBASIC-1.27□□□□□ -2.61
PRPF40AO75400 RNU6-706P-201ENST00000517229 104 ntBASIC-1.27□□□□□ -2.61
PRPF40AO75400 SNORD114-3-201ENST00000364969 75 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 268.8 ms