Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 MIR548Q-201ENST00000408404 100 ntBASIC-0.49□□□□□ -2.49
PRKNO60260 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.49□□□□□ -2.49
PRKNO60260 AP002795.1-201ENST00000534879 84 ntBASIC-0.49□□□□□ -2.49
PRKNO60260 MIR3938-201ENST00000582157 103 ntBASIC-0.49□□□□□ -2.49
PRKNO60260 MIR7110-201ENST00000612638 86 ntBASIC-0.49□□□□□ -2.49
PRKNO60260 MIR147A-201ENST00000385079 72 ntBASIC-0.5□□□□□ -2.49
PRKNO60260 RNA5SP180-201ENST00000516181 101 ntBASIC-0.5□□□□□ -2.49
PRKNO60260 RNU7-151P-201ENST00000516930 53 ntBASIC-0.5□□□□□ -2.49
PRKNO60260 MIR579-201ENST00000385221 98 ntBASIC-0.51□□□□□ -2.49
PRKNO60260 RNU6-995P-201ENST00000391244 107 ntBASIC-0.51□□□□□ -2.49
PRKNO60260 SNORD116.2-201ENST00000391251 93 ntBASIC-0.51□□□□□ -2.49
PRKNO60260 MIR5683-201ENST00000636514 76 ntBASIC-0.51□□□□□ -2.49
PRKNO60260 RNU6-431P-201ENST00000383874 107 ntBASIC-0.52□□□□□ -2.49
PRKNO60260 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.52□□□□□ -2.49
PRKNO60260 RNU7-119P-201ENST00000459279 63 ntBASIC-0.52□□□□□ -2.49
PRKNO60260 MIR7978-201ENST00000636158 59 ntBASIC-0.52□□□□□ -2.49
PRKNO60260 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.53□□□□□ -2.49
PRKNO60260 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.53□□□□□ -2.49
PRKNO60260 MIR378F-201ENST00000578143 78 ntBASIC-0.53□□□□□ -2.49
PRKNO60260 MIR3170-201ENST00000582699 77 ntBASIC-0.53□□□□□ -2.49
PRKNO60260 RNU6-810P-201ENST00000364001 107 ntBASIC-0.54□□□□□ -2.5
PRKNO60260 MIR520D-201ENST00000385002 87 ntBASIC-0.54□□□□□ -2.5
PRKNO60260 SNORD64-201ENST00000386683 67 ntBASIC-0.54□□□□□ -2.5
PRKNO60260 RNU6-788P-201ENST00000390967 104 ntBASIC-0.54□□□□□ -2.5
PRKNO60260 SNX3P1X-201ENST00000414887 175 ntBASIC-0.54□□□□□ -2.5
PRKNO60260 SNORA40.16-201ENST00000517238 121 ntBASIC-0.54□□□□□ -2.5
PRKNO60260 MIR4499-201ENST00000584834 69 ntBASIC-0.54□□□□□ -2.5
PRKNO60260 SNORD114-25-201ENST00000363742 72 ntBASIC-0.55□□□□□ -2.5
PRKNO60260 RNU6-520P-201ENST00000384717 104 ntBASIC-0.55□□□□□ -2.5
PRKNO60260 MIR125B1-201ENST00000385236 88 ntBASIC-0.55□□□□□ -2.5
PRKNO60260 MIR601-201ENST00000385256 79 ntBASIC-0.55□□□□□ -2.5
PRKNO60260 SNORA40B-201ENST00000385573 128 ntBASIC-0.55□□□□□ -2.5
PRKNO60260 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.55□□□□□ -2.5
PRKNO60260 RNU7-160P-201ENST00000516660 62 ntBASIC-0.55□□□□□ -2.5
PRKNO60260 MIR4490-201ENST00000582647 84 ntBASIC-0.55□□□□□ -2.5
PRKNO60260 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.55□□□□□ -2.5
PRKNO60260 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.56□□□□□ -2.5
PRKNO60260 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.56□□□□□ -2.5
PRKNO60260 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.57□□□□□ -2.5
PRKNO60260 MIR507-201ENST00000385234 94 ntBASIC-0.57□□□□□ -2.5
PRKNO60260 SNORD83B-201ENST00000386745 93 ntBASIC-0.57□□□□□ -2.5
PRKNO60260 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.57□□□□□ -2.5
PRKNO60260 MIR4306-201ENST00000583390 91 ntBASIC-0.57□□□□□ -2.5
PRKNO60260 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.57□□□□□ -2.5
PRKNO60260 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.57□□□□□ -2.5
PRKNO60260 RNU6-247P-201ENST00000362636 107 ntBASIC-0.58□□□□□ -2.5
PRKNO60260 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.58□□□□□ -2.5
PRKNO60260 MIR382-201ENST00000637119 76 ntBASIC-0.58□□□□□ -2.5
PRKNO60260 MIR633-201ENST00000384821 98 ntBASIC-0.59□□□□□ -2.5
PRKNO60260 MIR198-201ENST00000637333 62 ntBASIC-0.59□□□□□ -2.5
PRKNO60260 RNU6-446P-201ENST00000362827 106 ntBASIC-0.6□□□□□ -2.51
PRKNO60260 RNU6-608P-201ENST00000383927 104 ntBASIC-0.6□□□□□ -2.51
PRKNO60260 RNU6-258P-201ENST00000390884 101 ntBASIC-0.61□□□□□ -2.51
PRKNO60260 RPL35AP4-201ENST00000412007 102 ntBASIC-0.61□□□□□ -2.51
PRKNO60260 SNORD63.2-201ENST00000516303 64 ntBASIC-0.61□□□□□ -2.51
PRKNO60260 snoU83B.1-201ENST00000517136 88 ntBASIC-0.61□□□□□ -2.51
PRKNO60260 uc_338.19-201ENST00000616808 99 ntBASIC-0.61□□□□□ -2.51
PRKNO60260 RNA5SP26-201ENST00000362406 119 ntBASIC-0.62□□□□□ -2.51
PRKNO60260 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.62□□□□□ -2.51
PRKNO60260 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.62□□□□□ -2.51
PRKNO60260 RNU6-828P-201ENST00000364876 107 ntBASIC-0.62□□□□□ -2.51
PRKNO60260 MIR29B1-201ENST00000385015 81 ntBASIC-0.62□□□□□ -2.51
PRKNO60260 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.62□□□□□ -2.51
PRKNO60260 RNY4P27-201ENST00000363341 96 ntBASIC-0.63□□□□□ -2.51
PRKNO60260 RNU6-829P-201ENST00000363700 112 ntBASIC-0.63□□□□□ -2.51
PRKNO60260 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.63□□□□□ -2.51
PRKNO60260 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
PRKNO60260 AC079150.2-201ENST00000443733 78 ntBASIC-0.64□□□□□ -2.51
PRKNO60260 RNU7-134P-201ENST00000458997 64 ntBASIC-0.64□□□□□ -2.51
PRKNO60260 MIR6818-201ENST00000621576 65 ntBASIC-0.64□□□□□ -2.51
PRKNO60260 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.65□□□□□ -2.51
PRKNO60260 RNU6-974P-201ENST00000384099 108 ntBASIC-0.65□□□□□ -2.51
PRKNO60260 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.65□□□□□ -2.51
PRKNO60260 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.65□□□□□ -2.51
PRKNO60260 MIR4441-201ENST00000582623 100 ntBASIC-0.65□□□□□ -2.51
PRKNO60260 RNU6-226P-201ENST00000363778 107 ntBASIC-0.66□□□□□ -2.52
PRKNO60260 AC090616.4-201ENST00000448026 115 ntBASIC-0.66□□□□□ -2.52
PRKNO60260 MIR365A-201ENST00000362260 87 ntBASIC-0.67□□□□□ -2.52
PRKNO60260 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.67□□□□□ -2.52
PRKNO60260 SNORA27.2-201ENST00000363365 126 ntBASIC-0.67□□□□□ -2.52
PRKNO60260 RNU6-499P-201ENST00000365615 107 ntBASIC-0.67□□□□□ -2.52
PRKNO60260 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.67□□□□□ -2.52
PRKNO60260 MIR3165-201ENST00000579874 75 ntBASIC-0.67□□□□□ -2.52
PRKNO60260 SNORD113-4-201ENST00000364802 75 ntBASIC-0.68□□□□□ -2.52
PRKNO60260 MIR1285-2-201ENST00000408311 88 ntBASIC-0.68□□□□□ -2.52
PRKNO60260 MIR1246-201ENST00000636535 73 ntBASIC-0.68□□□□□ -2.52
PRKNO60260 MIR8485-201ENST00000401372 91 ntBASIC-0.69□□□□□ -2.52
PRKNO60260 RNU6-419P-201ENST00000517030 63 ntBASIC-0.7□□□□□ -2.52
PRKNO60260 MIR4723-201ENST00000585070 81 ntBASIC-0.7□□□□□ -2.52
PRKNO60260 AC138207.3-201ENST00000585289 166 ntBASIC-0.7□□□□□ -2.52
PRKNO60260 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.7□□□□□ -2.52
PRKNO60260 SNORD114-3-201ENST00000364969 75 ntBASIC-0.71□□□□□ -2.52
PRKNO60260 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.71□□□□□ -2.52
PRKNO60260 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.71□□□□□ -2.52
PRKNO60260 RNU6-706P-201ENST00000517229 104 ntBASIC-0.71□□□□□ -2.52
PRKNO60260 MIR1207-201ENST00000408249 87 ntBASIC-0.72□□□□□ -2.52
PRKNO60260 AL451105.1-201ENST00000450005 189 ntBASIC-0.72□□□□□ -2.52
PRKNO60260 MIR23C-201ENST00000579846 100 ntBASIC-0.73□□□□□ -2.53
PRKNO60260 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.74□□□□□ -2.53
PRKNO60260 RNU6-164P-201ENST00000364604 103 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 255 ms