Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 RNU6-979P-201ENST00000383896 107 ntBASIC-1.42□□□□□ -2.64
PCDHGA1Q9Y5H4 RNU6-540P-201ENST00000384622 101 ntBASIC-1.42□□□□□ -2.64
PCDHGA1Q9Y5H4 RNU7-88P-201ENST00000458752 63 ntBASIC-1.42□□□□□ -2.64
PCDHGA1Q9Y5H4 MIR8053-201ENST00000613344 75 ntBASIC-1.42□□□□□ -2.64
PCDHGA1Q9Y5H4 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.43□□□□□ -2.64
PCDHGA1Q9Y5H4 MIR29B1-201ENST00000385015 81 ntBASIC-1.43□□□□□ -2.64
PCDHGA1Q9Y5H4 U2.22-201ENST00000636441 106 ntBASIC-1.43□□□□□ -2.64
PCDHGA1Q9Y5H4 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.44□□□□□ -2.64
PCDHGA1Q9Y5H4 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.44□□□□□ -2.64
PCDHGA1Q9Y5H4 RNU6-587P-201ENST00000391282 106 ntBASIC-1.44□□□□□ -2.64
PCDHGA1Q9Y5H4 MTND4LP1-201ENST00000446263 157 ntBASIC-1.44□□□□□ -2.64
PCDHGA1Q9Y5H4 RNU6-698P-201ENST00000363523 107 ntBASIC-1.45□□□□□ -2.64
PCDHGA1Q9Y5H4 RNU6-34P-201ENST00000364874 107 ntBASIC-1.45□□□□□ -2.64
PCDHGA1Q9Y5H4 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.45□□□□□ -2.64
PCDHGA1Q9Y5H4 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.45□□□□□ -2.64
PCDHGA1Q9Y5H4 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.45□□□□□ -2.64
PCDHGA1Q9Y5H4 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.46□□□□□ -2.64
PCDHGA1Q9Y5H4 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.46□□□□□ -2.64
PCDHGA1Q9Y5H4 MIR8485-201ENST00000401372 91 ntBASIC-1.46□□□□□ -2.64
PCDHGA1Q9Y5H4 MIR4770-201ENST00000579149 58 ntBASIC-1.46□□□□□ -2.64
PCDHGA1Q9Y5H4 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.47□□□□□ -2.64
PCDHGA1Q9Y5H4 RNU6-458P-201ENST00000384179 107 ntBASIC-1.47□□□□□ -2.64
PCDHGA1Q9Y5H4 SNORD19-201ENST00000391191 68 ntBASIC-1.47□□□□□ -2.64
PCDHGA1Q9Y5H4 RNY4P30-201ENST00000410216 95 ntBASIC-1.47□□□□□ -2.64
PCDHGA1Q9Y5H4 RNU7-171P-201ENST00000459581 62 ntBASIC-1.47□□□□□ -2.64
PCDHGA1Q9Y5H4 U6.58-201ENST00000613107 107 ntBASIC-1.47□□□□□ -2.64
PCDHGA1Q9Y5H4 RNA5SP215-201ENST00000363440 122 ntBASIC-1.48□□□□□ -2.65
PCDHGA1Q9Y5H4 MIR6818-201ENST00000621576 65 ntBASIC-1.48□□□□□ -2.65
PCDHGA1Q9Y5H4 SNORD113.1-201ENST00000363280 73 ntBASIC-1.49□□□□□ -2.65
PCDHGA1Q9Y5H4 RNU6-153P-201ENST00000364422 104 ntBASIC-1.49□□□□□ -2.65
PCDHGA1Q9Y5H4 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.49□□□□□ -2.65
PCDHGA1Q9Y5H4 MIR527-201ENST00000385244 85 ntBASIC-1.49□□□□□ -2.65
PCDHGA1Q9Y5H4 RNU7-134P-201ENST00000458997 64 ntBASIC-1.49□□□□□ -2.65
PCDHGA1Q9Y5H4 RNU6-983P-201ENST00000516004 103 ntBASIC-1.49□□□□□ -2.65
PCDHGA1Q9Y5H4 MIR429-201ENST00000362106 83 ntBASIC-1.5□□□□□ -2.65
PCDHGA1Q9Y5H4 RNU6-668P-201ENST00000364180 107 ntBASIC-1.5□□□□□ -2.65
PCDHGA1Q9Y5H4 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.5□□□□□ -2.65
PCDHGA1Q9Y5H4 MIR548V-201ENST00000584165 80 ntBASIC-1.5□□□□□ -2.65
PCDHGA1Q9Y5H4 U4.4-201ENST00000620626 117 ntBASIC-1.5□□□□□ -2.65
PCDHGA1Q9Y5H4 MIR5683-201ENST00000636514 76 ntBASIC-1.5□□□□□ -2.65
PCDHGA1Q9Y5H4 RNU6-576P-201ENST00000390854 102 ntBASIC-1.51□□□□□ -2.65
PCDHGA1Q9Y5H4 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.52□□□□□ -2.65
PCDHGA1Q9Y5H4 AP002795.1-201ENST00000534879 84 ntBASIC-1.52□□□□□ -2.65
PCDHGA1Q9Y5H4 MIR4490-201ENST00000582647 84 ntBASIC-1.52□□□□□ -2.65
PCDHGA1Q9Y5H4 MIR664A-201ENST00000626086 82 ntBASIC-1.52□□□□□ -2.65
PCDHGA1Q9Y5H4 MIR1245B-201ENST00000636115 69 ntBASIC-1.52□□□□□ -2.65
PCDHGA1Q9Y5H4 RNA5SP26-201ENST00000362406 119 ntBASIC-1.53□□□□□ -2.65
PCDHGA1Q9Y5H4 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.53□□□□□ -2.65
PCDHGA1Q9Y5H4 MIR507-201ENST00000385234 94 ntBASIC-1.53□□□□□ -2.65
PCDHGA1Q9Y5H4 RNU6-696P-201ENST00000390834 107 ntBASIC-1.53□□□□□ -2.65
PCDHGA1Q9Y5H4 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.54□□□□□ -2.66
PCDHGA1Q9Y5H4 SNORD45A-201ENST00000384512 84 ntBASIC-1.54□□□□□ -2.66
PCDHGA1Q9Y5H4 MIR4712-201ENST00000583750 82 ntBASIC-1.55□□□□□ -2.66
PCDHGA1Q9Y5H4 MIR630-201ENST00000384957 97 ntBASIC-1.56□□□□□ -2.66
PCDHGA1Q9Y5H4 MIR450A2-201ENST00000385022 100 ntBASIC-1.56□□□□□ -2.66
PCDHGA1Q9Y5H4 MIR548Q-201ENST00000408404 100 ntBASIC-1.56□□□□□ -2.66
PCDHGA1Q9Y5H4 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.56□□□□□ -2.66
PCDHGA1Q9Y5H4 RNU6-242P-201ENST00000384359 107 ntBASIC-1.57□□□□□ -2.66
PCDHGA1Q9Y5H4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.57□□□□□ -2.66
PCDHGA1Q9Y5H4 MIR496-201ENST00000385226 102 ntBASIC-1.58□□□□□ -2.66
PCDHGA1Q9Y5H4 SNORD113-2-201ENST00000391082 72 ntBASIC-1.58□□□□□ -2.66
PCDHGA1Q9Y5H4 MIR494-201ENST00000349529 81 ntBASIC-1.59□□□□□ -2.66
PCDHGA1Q9Y5H4 RNU6-294P-201ENST00000364999 102 ntBASIC-1.59□□□□□ -2.66
PCDHGA1Q9Y5H4 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.59□□□□□ -2.66
PCDHGA1Q9Y5H4 MIR889-201ENST00000401280 79 ntBASIC-1.59□□□□□ -2.66
PCDHGA1Q9Y5H4 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.59□□□□□ -2.66
PCDHGA1Q9Y5H4 MIR4520-1-201ENST00000582609 70 ntBASIC-1.59□□□□□ -2.66
PCDHGA1Q9Y5H4 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.6□□□□□ -2.67
PCDHGA1Q9Y5H4 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.6□□□□□ -2.67
PCDHGA1Q9Y5H4 RNU6-70P-201ENST00000516438 60 ntBASIC-1.6□□□□□ -2.67
PCDHGA1Q9Y5H4 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.61□□□□□ -2.67
PCDHGA1Q9Y5H4 RNU6-598P-201ENST00000364017 105 ntBASIC-1.61□□□□□ -2.67
PCDHGA1Q9Y5H4 RNA5SP173-201ENST00000364857 136 ntBASIC-1.61□□□□□ -2.67
PCDHGA1Q9Y5H4 RNU6-119P-201ENST00000364882 107 ntBASIC-1.61□□□□□ -2.67
PCDHGA1Q9Y5H4 MIR4666B-201ENST00000578142 81 ntBASIC-1.61□□□□□ -2.67
PCDHGA1Q9Y5H4 MIR6502-201ENST00000617296 76 ntBASIC-1.61□□□□□ -2.67
PCDHGA1Q9Y5H4 MIR154-201ENST00000385243 84 ntBASIC-1.63□□□□□ -2.67
PCDHGA1Q9Y5H4 SNORD18.1-201ENST00000363807 70 ntBASIC-1.64□□□□□ -2.67
PCDHGA1Q9Y5H4 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.64□□□□□ -2.67
PCDHGA1Q9Y5H4 RNU6-164P-201ENST00000364604 103 ntBASIC-1.64□□□□□ -2.67
PCDHGA1Q9Y5H4 SNORD116-16-201ENST00000384533 92 ntBASIC-1.64□□□□□ -2.67
PCDHGA1Q9Y5H4 RPL35AP4-201ENST00000412007 102 ntBASIC-1.64□□□□□ -2.67
PCDHGA1Q9Y5H4 AC091912.2-201ENST00000624798 167 ntBASIC-1.64□□□□□ -2.67
PCDHGA1Q9Y5H4 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.65□□□□□ -2.67
PCDHGA1Q9Y5H4 RNU6-820P-201ENST00000384273 107 ntBASIC-1.66□□□□□ -2.68
PCDHGA1Q9Y5H4 MIR5582-201ENST00000579697 68 ntBASIC-1.66□□□□□ -2.68
PCDHGA1Q9Y5H4 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.67□□□□□ -2.68
PCDHGA1Q9Y5H4 RNU6-895P-201ENST00000384125 103 ntBASIC-1.67□□□□□ -2.68
PCDHGA1Q9Y5H4 SNORD116-24-201ENST00000384549 92 ntBASIC-1.67□□□□□ -2.68
PCDHGA1Q9Y5H4 AC090616.4-201ENST00000448026 115 ntBASIC-1.67□□□□□ -2.68
PCDHGA1Q9Y5H4 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.68□□□□□ -2.68
PCDHGA1Q9Y5H4 RNA5SP86-201ENST00000390869 98 ntBASIC-1.68□□□□□ -2.68
PCDHGA1Q9Y5H4 RNU6-630P-201ENST00000391258 106 ntBASIC-1.68□□□□□ -2.68
PCDHGA1Q9Y5H4 MIR6874-201ENST00000635894 71 ntBASIC-1.68□□□□□ -2.68
PCDHGA1Q9Y5H4 MIR3134-201ENST00000579433 74 ntBASIC-1.69□□□□□ -2.68
PCDHGA1Q9Y5H4 U2.18-201ENST00000622185 84 ntBASIC-1.69□□□□□ -2.68
PCDHGA1Q9Y5H4 SNORA41B-201ENST00000384785 128 ntBASIC-1.7□□□□□ -2.68
PCDHGA1Q9Y5H4 RNU6-118P-201ENST00000516552 102 ntBASIC-1.7□□□□□ -2.68
PCDHGA1Q9Y5H4 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.7□□□□□ -2.68
PCDHGA1Q9Y5H4 RNU6-787P-201ENST00000384032 107 ntBASIC-1.71□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 236 ms