Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC013734.1-201ENST00000619329 111 ntBASIC-1.65□□□□□ -2.67
SHROOM4Q9ULL8 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.66□□□□□ -2.68
SHROOM4Q9ULL8 MTATP8P2-201ENST00000435212 202 ntBASIC-1.66□□□□□ -2.68
SHROOM4Q9ULL8 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.66□□□□□ -2.68
SHROOM4Q9ULL8 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.66□□□□□ -2.68
SHROOM4Q9ULL8 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.67□□□□□ -2.68
SHROOM4Q9ULL8 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.67□□□□□ -2.68
SHROOM4Q9ULL8 U4.4-201ENST00000620626 117 ntBASIC-1.68□□□□□ -2.68
SHROOM4Q9ULL8 SNORD115-31-201ENST00000365318 82 ntBASIC-1.69□□□□□ -2.68
SHROOM4Q9ULL8 U6.97-201ENST00000636904 101 ntBASIC-1.69□□□□□ -2.68
SHROOM4Q9ULL8 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.69□□□□□ -2.68
SHROOM4Q9ULL8 MIR519C-201ENST00000385053 87 ntBASIC-1.69□□□□□ -2.68
SHROOM4Q9ULL8 RNU6-982P-201ENST00000516216 102 ntBASIC-1.69□□□□□ -2.68
SHROOM4Q9ULL8 AL031737.1-201ENST00000450125 223 ntBASIC-1.7□□□□□ -2.68
SHROOM4Q9ULL8 MIR548W-201ENST00000581970 74 ntBASIC-1.7□□□□□ -2.68
SHROOM4Q9ULL8 AC005520.4-201ENST00000604337 90 ntBASIC-1.7□□□□□ -2.68
SHROOM4Q9ULL8 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.7□□□□□ -2.68
SHROOM4Q9ULL8 RNU6-330P-201ENST00000363015 107 ntBASIC-1.71□□□□□ -2.68
SHROOM4Q9ULL8 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.71□□□□□ -2.68
SHROOM4Q9ULL8 MIR630-201ENST00000384957 97 ntBASIC-1.71□□□□□ -2.68
SHROOM4Q9ULL8 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.71□□□□□ -2.68
SHROOM4Q9ULL8 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.71□□□□□ -2.68
SHROOM4Q9ULL8 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.71□□□□□ -2.68
SHROOM4Q9ULL8 RNA5SP93-201ENST00000362525 114 ntBASIC-1.72□□□□□ -2.68
SHROOM4Q9ULL8 MIR548AA1-201ENST00000384971 97 ntBASIC-1.72□□□□□ -2.68
SHROOM4Q9ULL8 SNORD77.2-201ENST00000391045 68 ntBASIC-1.72□□□□□ -2.68
SHROOM4Q9ULL8 SNORD113-2-201ENST00000391082 72 ntBASIC-1.72□□□□□ -2.68
SHROOM4Q9ULL8 snoU13.10-201ENST00000459301 103 ntBASIC-1.72□□□□□ -2.68
SHROOM4Q9ULL8 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.72□□□□□ -2.68
SHROOM4Q9ULL8 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.72□□□□□ -2.68
SHROOM4Q9ULL8 RNU6-698P-201ENST00000363523 107 ntBASIC-1.73□□□□□ -2.69
SHROOM4Q9ULL8 RNU6-34P-201ENST00000364874 107 ntBASIC-1.73□□□□□ -2.69
SHROOM4Q9ULL8 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.73□□□□□ -2.69
SHROOM4Q9ULL8 MIR3675-201ENST00000583661 73 ntBASIC-1.73□□□□□ -2.69
SHROOM4Q9ULL8 MIR548V-201ENST00000584165 80 ntBASIC-1.73□□□□□ -2.69
SHROOM4Q9ULL8 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.73□□□□□ -2.69
SHROOM4Q9ULL8 SNORD115-37-201ENST00000363768 82 ntBASIC-1.74□□□□□ -2.69
SHROOM4Q9ULL8 RNU6-194P-201ENST00000363862 105 ntBASIC-1.74□□□□□ -2.69
SHROOM4Q9ULL8 MIR3910-1-201ENST00000580936 111 ntBASIC-1.74□□□□□ -2.69
SHROOM4Q9ULL8 MIR429-201ENST00000362106 83 ntBASIC-1.75□□□□□ -2.69
SHROOM4Q9ULL8 RNU6-247P-201ENST00000362636 107 ntBASIC-1.75□□□□□ -2.69
SHROOM4Q9ULL8 RNA5SP405-201ENST00000363059 114 ntBASIC-1.75□□□□□ -2.69
SHROOM4Q9ULL8 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.75□□□□□ -2.69
SHROOM4Q9ULL8 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.75□□□□□ -2.69
SHROOM4Q9ULL8 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.76□□□□□ -2.69
SHROOM4Q9ULL8 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.76□□□□□ -2.69
SHROOM4Q9ULL8 RNU7-151P-201ENST00000516930 53 ntBASIC-1.76□□□□□ -2.69
SHROOM4Q9ULL8 MIR3139-201ENST00000579145 76 ntBASIC-1.76□□□□□ -2.69
SHROOM4Q9ULL8 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.76□□□□□ -2.69
SHROOM4Q9ULL8 SNORD45.1-201ENST00000363181 77 ntBASIC-1.77□□□□□ -2.69
SHROOM4Q9ULL8 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.77□□□□□ -2.69
SHROOM4Q9ULL8 RNU6-118P-201ENST00000516552 102 ntBASIC-1.77□□□□□ -2.69
SHROOM4Q9ULL8 RNU6-974P-201ENST00000384099 108 ntBASIC-1.78□□□□□ -2.69
SHROOM4Q9ULL8 SNORA27.2-201ENST00000363365 126 ntBASIC-1.79□□□□□ -2.7
SHROOM4Q9ULL8 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.79□□□□□ -2.7
SHROOM4Q9ULL8 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.79□□□□□ -2.7
SHROOM4Q9ULL8 RNU6-669P-201ENST00000365575 107 ntBASIC-1.79□□□□□ -2.7
SHROOM4Q9ULL8 SNORA41B-201ENST00000384785 128 ntBASIC-1.79□□□□□ -2.7
SHROOM4Q9ULL8 MIR579-201ENST00000385221 98 ntBASIC-1.79□□□□□ -2.7
SHROOM4Q9ULL8 RNU6-624P-201ENST00000363411 107 ntBASIC-1.8□□□□□ -2.7
SHROOM4Q9ULL8 RNY3P8-201ENST00000411366 126 ntBASIC-1.8□□□□□ -2.7
SHROOM4Q9ULL8 SNORD116-16-201ENST00000384533 92 ntBASIC-1.81□□□□□ -2.7
SHROOM4Q9ULL8 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.81□□□□□ -2.7
SHROOM4Q9ULL8 RNU6-604P-201ENST00000390917 100 ntBASIC-1.82□□□□□ -2.7
SHROOM4Q9ULL8 RNY4P18-201ENST00000391107 89 ntBASIC-1.82□□□□□ -2.7
SHROOM4Q9ULL8 SNORD63.2-201ENST00000516303 64 ntBASIC-1.82□□□□□ -2.7
SHROOM4Q9ULL8 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.82□□□□□ -2.7
SHROOM4Q9ULL8 SNORD1B-201ENST00000363091 84 ntBASIC-1.82□□□□□ -2.7
SHROOM4Q9ULL8 MIR581-201ENST00000384895 96 ntBASIC-1.82□□□□□ -2.7
SHROOM4Q9ULL8 SNORA40.13-201ENST00000516379 120 ntBASIC-1.82□□□□□ -2.7
SHROOM4Q9ULL8 MIR4748-201ENST00000578076 82 ntBASIC-1.82□□□□□ -2.7
SHROOM4Q9ULL8 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.83□□□□□ -2.7
SHROOM4Q9ULL8 SNORD54-201ENST00000459159 67 ntBASIC-1.83□□□□□ -2.7
SHROOM4Q9ULL8 MIR7978-201ENST00000636158 59 ntBASIC-1.83□□□□□ -2.7
SHROOM4Q9ULL8 RNU6-633P-201ENST00000362612 103 ntBASIC-1.84□□□□□ -2.7
SHROOM4Q9ULL8 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.84□□□□□ -2.7
SHROOM4Q9ULL8 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.85□□□□□ -2.71
SHROOM4Q9ULL8 RNU6-995P-201ENST00000391244 107 ntBASIC-1.85□□□□□ -2.71
SHROOM4Q9ULL8 MIR466-201ENST00000580653 84 ntBASIC-1.85□□□□□ -2.71
SHROOM4Q9ULL8 RNA5SP215-201ENST00000363440 122 ntBASIC-1.86□□□□□ -2.71
SHROOM4Q9ULL8 SNORD116-22-201ENST00000384430 92 ntBASIC-1.86□□□□□ -2.71
SHROOM4Q9ULL8 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.88□□□□□ -2.71
SHROOM4Q9ULL8 SNORA8.1-201ENST00000384250 140 ntBASIC-1.88□□□□□ -2.71
SHROOM4Q9ULL8 MT-TM-201ENST00000387377 68 ntBASIC-1.88□□□□□ -2.71
SHROOM4Q9ULL8 AC074348.1-201ENST00000426503 132 ntBASIC-1.88□□□□□ -2.71
SHROOM4Q9ULL8 AC097484.2-201ENST00000509147 251 ntBASIC-1.88□□□□□ -2.71
SHROOM4Q9ULL8 AC093729.1-201ENST00000513074 128 ntBASIC-1.88□□□□□ -2.71
SHROOM4Q9ULL8 RNU6-523P-201ENST00000516304 54 ntBASIC-1.88□□□□□ -2.71
SHROOM4Q9ULL8 RNU6-303P-201ENST00000517091 106 ntBASIC-1.88□□□□□ -2.71
SHROOM4Q9ULL8 AP001318.4-201ENST00000616637 121 ntBASIC-1.88□□□□□ -2.71
SHROOM4Q9ULL8 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.88□□□□□ -2.71
SHROOM4Q9ULL8 MIR450A1-201ENST00000362262 91 ntBASIC-1.88□□□□□ -2.71
SHROOM4Q9ULL8 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.88□□□□□ -2.71
SHROOM4Q9ULL8 MIR4668-201ENST00000582284 70 ntBASIC-1.88□□□□□ -2.71
SHROOM4Q9ULL8 FTX_4.1-201ENST00000616291 147 ntBASIC-1.88□□□□□ -2.71
SHROOM4Q9ULL8 SNORD18C-201ENST00000362704 69 ntBASIC-1.89□□□□□ -2.71
SHROOM4Q9ULL8 SNORD113.1-201ENST00000363280 73 ntBASIC-1.89□□□□□ -2.71
SHROOM4Q9ULL8 RNU6-668P-201ENST00000364180 107 ntBASIC-1.89□□□□□ -2.71
SHROOM4Q9ULL8 MTND4LP1-201ENST00000446263 157 ntBASIC-1.89□□□□□ -2.71
SHROOM4Q9ULL8 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.9□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 213.7 ms