Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RNY4P30-201ENST00000410216 95 ntBASIC-1.57□□□□□ -2.66
SSX3Q99909 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.57□□□□□ -2.66
SSX3Q99909 RNA5SP215-201ENST00000363440 122 ntBASIC-1.58□□□□□ -2.66
SSX3Q99909 AP002795.1-201ENST00000534879 84 ntBASIC-1.58□□□□□ -2.66
SSX3Q99909 U4.4-201ENST00000620626 117 ntBASIC-1.58□□□□□ -2.66
SSX3Q99909 RNA5SP26-201ENST00000362406 119 ntBASIC-1.6□□□□□ -2.67
SSX3Q99909 SNORD45A-201ENST00000384512 84 ntBASIC-1.6□□□□□ -2.67
SSX3Q99909 MIR664A-201ENST00000626086 82 ntBASIC-1.6□□□□□ -2.67
SSX3Q99909 U2.22-201ENST00000636441 106 ntBASIC-1.6□□□□□ -2.67
SSX3Q99909 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.61□□□□□ -2.67
SSX3Q99909 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.61□□□□□ -2.67
SSX3Q99909 MIR630-201ENST00000384957 97 ntBASIC-1.61□□□□□ -2.67
SSX3Q99909 MIR4306-201ENST00000583390 91 ntBASIC-1.61□□□□□ -2.67
SSX3Q99909 SNORD113-2-201ENST00000391082 72 ntBASIC-1.62□□□□□ -2.67
SSX3Q99909 RNU7-171P-201ENST00000459581 62 ntBASIC-1.62□□□□□ -2.67
SSX3Q99909 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.62□□□□□ -2.67
SSX3Q99909 RNU7-134P-201ENST00000458997 64 ntBASIC-1.63□□□□□ -2.67
SSX3Q99909 RNA5SP173-201ENST00000364857 136 ntBASIC-1.64□□□□□ -2.67
SSX3Q99909 RNU6-242P-201ENST00000384359 107 ntBASIC-1.65□□□□□ -2.67
SSX3Q99909 RPL35AP4-201ENST00000412007 102 ntBASIC-1.65□□□□□ -2.67
SSX3Q99909 MIR4712-201ENST00000583750 82 ntBASIC-1.65□□□□□ -2.67
SSX3Q99909 MIR1245B-201ENST00000636115 69 ntBASIC-1.65□□□□□ -2.67
SSX3Q99909 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.66□□□□□ -2.68
SSX3Q99909 RNU6-706P-201ENST00000517229 104 ntBASIC-1.66□□□□□ -2.68
SSX3Q99909 MIR494-201ENST00000349529 81 ntBASIC-1.67□□□□□ -2.68
SSX3Q99909 RNU6-153P-201ENST00000364422 104 ntBASIC-1.67□□□□□ -2.68
SSX3Q99909 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.67□□□□□ -2.68
SSX3Q99909 MIR154-201ENST00000385243 84 ntBASIC-1.67□□□□□ -2.68
SSX3Q99909 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.67□□□□□ -2.68
SSX3Q99909 RNA5SP461-201ENST00000516451 104 ntBASIC-1.67□□□□□ -2.68
SSX3Q99909 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.67□□□□□ -2.68
SSX3Q99909 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.67□□□□□ -2.68
SSX3Q99909 RNU6-598P-201ENST00000364017 105 ntBASIC-1.68□□□□□ -2.68
SSX3Q99909 RNU6-164P-201ENST00000364604 103 ntBASIC-1.68□□□□□ -2.68
SSX3Q99909 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.68□□□□□ -2.68
SSX3Q99909 RNU6-70P-201ENST00000516438 60 ntBASIC-1.68□□□□□ -2.68
SSX3Q99909 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.68□□□□□ -2.68
SSX3Q99909 MIR450A2-201ENST00000385022 100 ntBASIC-1.69□□□□□ -2.68
SSX3Q99909 MIR4723-201ENST00000585070 81 ntBASIC-1.69□□□□□ -2.68
SSX3Q99909 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.69□□□□□ -2.68
SSX3Q99909 RNU6-895P-201ENST00000384125 103 ntBASIC-1.7□□□□□ -2.68
SSX3Q99909 RNA5SP180-201ENST00000516181 101 ntBASIC-1.7□□□□□ -2.68
SSX3Q99909 SNORD116-16-201ENST00000384533 92 ntBASIC-1.71□□□□□ -2.68
SSX3Q99909 U4.2-201ENST00000618561 85 ntBASIC-1.71□□□□□ -2.68
SSX3Q99909 MIR365A-201ENST00000362260 87 ntBASIC-1.72□□□□□ -2.68
SSX3Q99909 RNU6-294P-201ENST00000364999 102 ntBASIC-1.72□□□□□ -2.68
SSX3Q99909 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.72□□□□□ -2.68
SSX3Q99909 RNU6-630P-201ENST00000391258 106 ntBASIC-1.72□□□□□ -2.68
SSX3Q99909 AC090616.4-201ENST00000448026 115 ntBASIC-1.72□□□□□ -2.68
SSX3Q99909 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.73□□□□□ -2.69
SSX3Q99909 MIR1285-2-201ENST00000408311 88 ntBASIC-1.73□□□□□ -2.69
SSX3Q99909 U2.18-201ENST00000622185 84 ntBASIC-1.73□□□□□ -2.69
SSX3Q99909 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.74□□□□□ -2.69
SSX3Q99909 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.74□□□□□ -2.69
SSX3Q99909 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.74□□□□□ -2.69
SSX3Q99909 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.75□□□□□ -2.69
SSX3Q99909 AC091912.2-201ENST00000624798 167 ntBASIC-1.75□□□□□ -2.69
SSX3Q99909 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.77□□□□□ -2.69
SSX3Q99909 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.77□□□□□ -2.69
SSX3Q99909 MIR548AA1-201ENST00000384971 97 ntBASIC-1.77□□□□□ -2.69
SSX3Q99909 MIR4666B-201ENST00000578142 81 ntBASIC-1.77□□□□□ -2.69
SSX3Q99909 MIR4441-201ENST00000582623 100 ntBASIC-1.77□□□□□ -2.69
SSX3Q99909 SNORA41B-201ENST00000384785 128 ntBASIC-1.78□□□□□ -2.69
SSX3Q99909 MIR6874-201ENST00000635894 71 ntBASIC-1.78□□□□□ -2.69
SSX3Q99909 SNORD114-3-201ENST00000364969 75 ntBASIC-1.79□□□□□ -2.7
SSX3Q99909 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.79□□□□□ -2.7
SSX3Q99909 MIR8485-201ENST00000401372 91 ntBASIC-1.79□□□□□ -2.7
SSX3Q99909 AC018880.2-201ENST00000414265 201 ntBASIC-1.79□□□□□ -2.7
SSX3Q99909 AC138207.3-201ENST00000585289 166 ntBASIC-1.79□□□□□ -2.7
SSX3Q99909 RNU6-608P-201ENST00000383927 104 ntBASIC-1.8□□□□□ -2.7
SSX3Q99909 SNORD116-24-201ENST00000384549 92 ntBASIC-1.8□□□□□ -2.7
SSX3Q99909 HLA-S-202ENST00000425174 53 ntBASIC-1.81□□□□□ -2.7
SSX3Q99909 MIR3134-201ENST00000579433 74 ntBASIC-1.81□□□□□ -2.7
SSX3Q99909 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.81□□□□□ -2.7
SSX3Q99909 SNORD115-31-201ENST00000365318 82 ntBASIC-1.82□□□□□ -2.7
SSX3Q99909 RNU6-820P-201ENST00000384273 107 ntBASIC-1.82□□□□□ -2.7
SSX3Q99909 MIR520D-201ENST00000385002 87 ntBASIC-1.82□□□□□ -2.7
SSX3Q99909 MIR889-201ENST00000401280 79 ntBASIC-1.82□□□□□ -2.7
SSX3Q99909 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.82□□□□□ -2.7
SSX3Q99909 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.82□□□□□ -2.7
SSX3Q99909 MIR5582-201ENST00000579697 68 ntBASIC-1.82□□□□□ -2.7
SSX3Q99909 SNORD1B-201ENST00000363091 84 ntBASIC-1.83□□□□□ -2.7
SSX3Q99909 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.83□□□□□ -2.7
SSX3Q99909 MIR23C-201ENST00000579846 100 ntBASIC-1.84□□□□□ -2.7
SSX3Q99909 MIR3170-201ENST00000582699 77 ntBASIC-1.84□□□□□ -2.7
SSX3Q99909 RNU6-247P-201ENST00000362636 107 ntBASIC-1.85□□□□□ -2.71
SSX3Q99909 RNU6-995P-201ENST00000391244 107 ntBASIC-1.85□□□□□ -2.71
SSX3Q99909 MIR1207-201ENST00000408249 87 ntBASIC-1.85□□□□□ -2.71
SSX3Q99909 RNU6-687P-201ENST00000516443 89 ntBASIC-1.85□□□□□ -2.71
SSX3Q99909 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.86□□□□□ -2.71
SSX3Q99909 RNU6-542P-201ENST00000516405 103 ntBASIC-1.86□□□□□ -2.71
SSX3Q99909 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.87□□□□□ -2.71
SSX3Q99909 RNU6-411P-201ENST00000384451 107 ntBASIC-1.87□□□□□ -2.71
SSX3Q99909 RNU6-787P-201ENST00000384032 107 ntBASIC-1.89□□□□□ -2.71
SSX3Q99909 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.89□□□□□ -2.71
SSX3Q99909 U7.4-201ENST00000614961 63 ntBASIC-1.89□□□□□ -2.71
SSX3Q99909 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.91□□□□□ -2.72
SSX3Q99909 RNU6-400P-201ENST00000391173 106 ntBASIC-1.91□□□□□ -2.72
SSX3Q99909 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.91□□□□□ -2.72
SSX3Q99909 RNU7-151P-201ENST00000516930 53 ntBASIC-1.91□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 212.2 ms